Literature DB >> 23329008

Diversity of beet curly top Iran virus isolated from different hosts in Iran.

Sara Gharouni Kardani1, Jahangir Heydarnejad, Mohammad Zakiaghl, Mohsen Mehrvar, Simona Kraberger, Arvind Varsani.   

Abstract

Beet curly top Iran virus (BCTIV) is a major pathogen of sugar beet in Iran. In order to study diversity of BCTIV, we sampled 68 plants in Iran during the summer of 2010 with curly top disease symptoms on beans (Phaseolus vulgaris), cowpeas (Vigna unguiculata), tomatoes (Solanum lycopersicum L.), sea beets (Beta vulgaris subsp. maritima), and sugar beets (Beta vulgaris). Plant samples showing leaf curling, yellowing, and/or swelling of veins on the lower leaf surfaces were collected from various fields in Khorasan Razavi, Northern Khorasan (north-eastern Iran), East Azarbayejan, West Azarbayejan (north-western Iran), and Fars (southern Iran) provinces. Using rolling circle amplification coupled with restriction digests, cloning, and Sanger sequencing, we determined the genomes of nine new BCTIV isolates from bean, cowpea, tomato, sea beet, and sugar beet in Iran. Our analysis reveals ~11 % diversity amongst BCTIV isolates and we detect evidence of recombination within these genomes.

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Year:  2013        PMID: 23329008     DOI: 10.1007/s11262-013-0875-5

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  12 in total

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Journal:  J Virol       Date:  2012-07       Impact factor: 5.103

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Authors:  Dionne N Shepherd; Darren P Martin; Pierre Lefeuvre; Adérito L Monjane; Betty E Owor; Edward P Rybicki; Arvind Varsani
Journal:  J Virol Methods       Date:  2008-02-15       Impact factor: 2.014

4.  Identification of regions of the Beet mild curly top virus (family Geminiviridae) capsid protein involved in systemic infection, virion formation and leafhopper transmission.

Authors:  Maria J Soto; Li-Fang Chen; Young-Su Seo; Robert L Gilbertson
Journal:  Virology       Date:  2005-08-08       Impact factor: 3.616

5.  Identification of a single-stranded DNA virus associated with citrus chlorotic dwarf disease, a new member in the family Geminiviridae.

Authors:  Giuliana Loconsole; Pasquale Saldarelli; Harshavardhan Doddapaneni; Vito Savino; Giovanni P Martelli; Maria Saponari
Journal:  Virology       Date:  2012-07-01       Impact factor: 3.616

6.  Turnip curly top virus, a highly divergent geminivirus infecting turnip in Iran.

Authors:  Rob W Briddon; Jahangir Heydarnejad; Fakhrosadat Khosrowfar; Hossain Massumi; Darren P Martin; Arvind Varsani
Journal:  Virus Res       Date:  2010-06-08       Impact factor: 3.303

7.  A small-scale procedure for extracting nucleic acids from woody plants infected with various phytopathogens for PCR assay.

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Journal:  J Virol Methods       Date:  1998-03       Impact factor: 2.014

8.  Genome characterization and genetic diversity of beet curly top Iran virus: a geminivirus with a novel nonanucleotide.

Authors:  H R Bolok Yazdi; J Heydarnejad; H Massumi
Journal:  Virus Genes       Date:  2008-04-10       Impact factor: 2.332

9.  RDP3: a flexible and fast computer program for analyzing recombination.

Authors:  Darren P Martin; Philippe Lemey; Martin Lott; Vincent Moulton; David Posada; Pierre Lefeuvre
Journal:  Bioinformatics       Date:  2010-08-26       Impact factor: 6.937

10.  A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family.

Authors:  Arvind Varsani; Dionne N Shepherd; Kyle Dent; Aderito L Monjane; Edward P Rybicki; Darren P Martin
Journal:  Virol J       Date:  2009-03-25       Impact factor: 4.099

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  6 in total

1.  Splicing features in the expression of the complementary-sense genes of Beet curly top Iran virus.

Authors:  Naghmeh Bozorgi; Jahangir Heydarnejad; Mehdi Kamali; Hossain Massumi
Journal:  Virus Genes       Date:  2016-12-21       Impact factor: 2.332

2.  SDT: a virus classification tool based on pairwise sequence alignment and identity calculation.

Authors:  Brejnev Muhizi Muhire; Arvind Varsani; Darren Patrick Martin
Journal:  PLoS One       Date:  2014-09-26       Impact factor: 3.240

3.  Molecular characterization and construction of an infectious clone of a pepper isolate of Beet curly top Iran virus.

Authors:  Omid Eini; Ghazal Ebadzad Sahraei; Seyed Ali Akbar Behjatnia
Journal:  Mol Biol Res Commun       Date:  2016-06

4.  Virus-mediated export of chromosomal DNA in plants.

Authors:  Marco Catoni; Emanuela Noris; Anna Maria Vaira; Thomas Jonesman; Slavica Matić; Reihaneh Soleimani; Seyed Ali Akbar Behjatnia; Nestor Vinals; Jerzy Paszkowski; Gian Paolo Accotto
Journal:  Nat Commun       Date:  2018-12-13       Impact factor: 14.919

5.  New World Cactaceae Plants Harbor Diverse Geminiviruses.

Authors:  Rafaela S Fontenele; Andrew M Salywon; Lucas C Majure; Ilaria N Cobb; Amulya Bhaskara; Jesús A Avalos-Calleros; Gerardo R Argüello-Astorga; Kara Schmidlin; Anthony Khalifeh; Kendal Smith; Joshua Schreck; Michael C Lund; Matias Köhler; Martin F Wojciechowski; Wendy C Hodgson; Raul Puente-Martinez; Koenraad Van Doorslaer; Safaa Kumari; Kehinde A Oyeniran; Christian Vernière; Denis Filloux; Philippe Roumagnac; Pierre Lefeuvre; Simone G Ribeiro; Simona P Kraberger; Darren P Martin; Arvind Varsani
Journal:  Viruses       Date:  2021-04-16       Impact factor: 5.048

Review 6.  Barcoding of Plant Viruses with Circular Single-Stranded DNA Based on Rolling Circle Amplification.

Authors:  Holger Jeske
Journal:  Viruses       Date:  2018-08-31       Impact factor: 5.048

  6 in total

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