Literature DB >> 23328903

Characterization and genome sequencing of phage Abp1, a new phiKMV-like virus infecting multidrug-resistant Acinetobacter baumannii.

Guangtao Huang1, Shuai Le, Yizhi Peng, Yan Zhao, Supeng Yin, Lin Zhang, Xinyue Yao, Yinling Tan, Ming Li, Fuquan Hu.   

Abstract

While screening for alternative antibiotics against multidrug-resistant Acinetobacter baumannii, we isolated a virulent A. baumannii bacteriophage Abp1. Transmission electron microscopy revealed that the phage had an icosahedral head with a short tail and should be classified as a member of the Podoviridae family. SDS-PAGE showed that Abp1 contained at least one major and nine minor proteins. In a single-step growth test, we demonstrated that Abp1 had a latent period of 10 min and a burst size of 350. Abp1 also had a relatively narrow host range. The entire genome was sequenced, and the final assembly yielded a 42,185 bp, linear, double-stranded DNA molecule with a G+C content of 39.15 % and containing 54 putative genes. Among these genes, 26 were functionally known, leaving 28 unknown putative genes. Abp1 is a new member of the phiKMV-like virus subgroup of the T7 group; its genome sequence is very similar to that of the A. baumannii phage phiAB1.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23328903     DOI: 10.1007/s00284-013-0308-7

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  43 in total

1.  Discovery, purification, and characterization of a temperate transducing bacteriophage for Bordetella avium.

Authors:  C B Shelton; D R Crosslin; J L Casey; S Ng; L M Temple; P E Orndorff
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

2.  Classification of bacterial viruses; the relationship of two Serratia phages to coli-dysentery phages T3, T7, and D44.

Authors:  M H ADAMS; E WADE
Journal:  J Bacteriol       Date:  1954-09       Impact factor: 3.490

3.  A novel and hybrid composite transposon at the origin of acquisition of bla(RTG-5) in Acinetobacter baumannii.

Authors:  Rémy A Bonnin; Laurent Poirel; Patrice Nordmann
Journal:  Int J Antimicrob Agents       Date:  2012-05-23       Impact factor: 5.283

Review 4.  Homing endonuclease structure and function.

Authors:  Barry L Stoddard
Journal:  Q Rev Biophys       Date:  2005-12-09       Impact factor: 5.318

5.  Genomic analysis of Pseudomonas aeruginosa phages LKD16 and LKA1: establishment of the phiKMV subgroup within the T7 supergroup.

Authors:  Pieter-Jan Ceyssens; Rob Lavigne; Wesley Mattheus; Andrew Chibeu; Kirsten Hertveldt; Jan Mast; Johan Robben; Guido Volckaert
Journal:  J Bacteriol       Date:  2006-10       Impact factor: 3.490

6.  Isolation and characterization of bacteriophages infecting Salmonella spp.

Authors:  Gwyneth V Carey-Smith; Craig Billington; Angela J Cornelius; J Andrew Hudson; Jack A Heinemann
Journal:  FEMS Microbiol Lett       Date:  2006-05       Impact factor: 2.742

7.  Identification of lytic bacteriophage MmP1, assigned to a new member of T7-like phages infecting Morganella morganii.

Authors:  Junmin Zhu; Xiancai Rao; Yinling Tan; Kun Xiong; Zhen Hu; Zhijin Chen; Xiaolin Jin; Shu Li; Yao Chen; Fuquan Hu
Journal:  Genomics       Date:  2010-06-16       Impact factor: 5.736

8.  Characterization and PCR-based replicon typing of resistance plasmids in Acinetobacter baumannii.

Authors:  Alessia Bertini; Laurent Poirel; Pauline D Mugnier; Laura Villa; Patrice Nordmann; Alessandra Carattoli
Journal:  Antimicrob Agents Chemother       Date:  2010-07-26       Impact factor: 5.191

9.  Characterization of class 1 integron resistance gene cassettes and the identification of a novel IS-like element in Acinetobacter baumannii.

Authors:  Heidi Segal; Robin Thomas; B Gay Elisha
Journal:  Plasmid       Date:  2003-03       Impact factor: 3.466

10.  Novel Podoviridae family bacteriophage infecting Weissella cibaria isolated from Kimchi.

Authors:  Hans Petter Kleppen; Helge Holo; Sang-Rok Jeon; Ingolf F Nes; Sung-Sik Yoon
Journal:  Appl Environ Microbiol       Date:  2012-08-10       Impact factor: 4.792

View more
  26 in total

1.  Characterization and Genome Sequencing of a Novel Bacteriophage PH101 Infecting Pseudoalteromonas marina BH101 from the Yellow Sea of China.

Authors:  Duo-bing Wang; Meng-qi Sun; Hong-bing Shao; Yan Li; Xue Meng; Zhao-yang Liu; Min Wang
Journal:  Curr Microbiol       Date:  2015-08-14       Impact factor: 2.188

2.  Isolation and Complete Genome Sequence of a Novel Pseudoalteromonas Phage PH357 from the Yangtze River Estuary.

Authors:  Zheng Gong; Min Wang; Qingwei Yang; Zhongshi Li; Jun Xia; Yu Gao; Yong Jiang; Xue Meng; Zhaoyang Liu; Ding Yang; Fangfei Zhang; Hongbing Shao; Duobing Wang
Journal:  Curr Microbiol       Date:  2017-04-20       Impact factor: 2.188

3.  Characterization and Complete Genome Sequence of a Novel Siphoviridae Bacteriophage BS5.

Authors:  Xue Meng; Min Wang; Siyuan You; Duobing Wang; Yan Li; Zhaoyang Liu; Yu Gao; Lu Liu; Yaoyuan Zhang; Zhenghao Yan; Chunyan Liu; Yong Jiang; Hongbing Shao
Journal:  Curr Microbiol       Date:  2017-04-20       Impact factor: 2.188

4.  Complete Genome of a Novel Pseudoalteromonas Phage PHq0.

Authors:  Duo-bing Wang; Yan Li; Meng-qi Sun; Jin-peng Huang; Hong-bing Shao; Qi-lin Xin; Min Wang
Journal:  Curr Microbiol       Date:  2016-01       Impact factor: 2.188

5.  Genomic and Biochemical Characterization of Acinetobacter Podophage Petty Reveals a Novel Lysis Mechanism and Tail-Associated Depolymerase Activity.

Authors:  A C Hernandez-Morales; L L Lessor; T L Wood; D Migl; E M Mijalis; J Cahill; W K Russell; R F Young; J J Gill
Journal:  J Virol       Date:  2018-02-26       Impact factor: 5.103

6.  Isolation and Complete Genome of the Marine Pseudoalteromonas Phage C7 from Coastal Seawater of Yellow Sea, China.

Authors:  Qi Wang; Yundan Liu; Qian Liu; Xinxin Liu; Fan Yang; Min Wang; Hongbing Shao; Yong Jiang
Journal:  Curr Microbiol       Date:  2019-11-23       Impact factor: 2.188

7.  Genomic and proteomic features of mycobacteriophage SWU1 isolated from China soil.

Authors:  Xiangyu Fan; Jianlong Yan; Longxiang Xie; Lanying Zeng; Ryland F Young; Jianping Xie
Journal:  Gene       Date:  2015-02-19       Impact factor: 3.688

8.  Characterization and Detection of Endolysin Gene from Three Acinetobacter baumannii Bacteriophages Isolated from Sewage Water.

Authors:  Thawatchai Kitti; Rapee Thummeepak; Aunchalee Thanwisai; Kamala Boonyodying; Duangkamol Kunthalert; Pannika Ritvirool; Sutthirat Sitthisak
Journal:  Indian J Microbiol       Date:  2014-05-21       Impact factor: 2.461

9.  Complete Genome of Acinetobacter baumannii Podophage Petty.

Authors:  Ian P Mumm; Thammajun L Wood; Karthik R Chamakura; Gabriel F Kuty Everett
Journal:  Genome Announc       Date:  2013-12-05

10.  Chromosomal DNA deletion confers phage resistance to Pseudomonas aeruginosa.

Authors:  Shuai Le; Xinyue Yao; Shuguang Lu; Yinling Tan; Xiancai Rao; Ming Li; Xiaolin Jin; Jing Wang; Yan Zhao; Nicholas C Wu; Renate Lux; Xuesong He; Wenyuan Shi; Fuquan Hu
Journal:  Sci Rep       Date:  2014-04-28       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.