Literature DB >> 23328086

Gene gymnastics: Synthetic biology for baculovirus expression vector system engineering.

Lakshmi S Vijayachandran1, Deepak B Thimiri Govinda Raj, Evelina Edelweiss, Kapil Gupta, Josef Maier, Valentin Gordeliy, Daniel J Fitzgerald, Imre Berger.   

Abstract

Most essential activities in eukaryotic cells are catalyzed by large multiprotein assemblies containing up to ten or more interlocking subunits. The vast majority of these protein complexes are not easily accessible for high resolution studies aimed at unlocking their mechanisms, due to their low cellular abundance and high heterogeneity. Recombinant overproduction can resolve this bottleneck and baculovirus expression vector systems (BEVS) have emerged as particularly powerful tools for the provision of eukaryotic multiprotein complexes in high quality and quantity. Recently, synthetic biology approaches have begun to make their mark in improving existing BEVS reagents by de novo design of streamlined transfer plasmids and by engineering the baculovirus genome. Here we present OmniBac, comprising new custom designed reagents that further facilitate the integration of heterologous genes into the baculovirus genome for multiprotein expression. Based on comparative genome analysis and data mining, we herein present a blueprint to custom design and engineer the entire baculovirus genome for optimized production properties using a bottom-up synthetic biology approach.

Keywords:  BEVS; MultiBac; OmniBac; baculovirus; comparative genome analysis; multiprotein complexes; recombinant protein production

Mesh:

Substances:

Year:  2013        PMID: 23328086      PMCID: PMC3813527          DOI: 10.4161/bioe.22966

Source DB:  PubMed          Journal:  Bioengineered        ISSN: 2165-5979            Impact factor:   3.269


  41 in total

Review 1.  Milestones leading to the genetic engineering of baculoviruses as expression vector systems and viral pesticides.

Authors:  Max D Summers
Journal:  Adv Virus Res       Date:  2006       Impact factor: 9.937

Review 2.  The molecular sociology of the cell.

Authors:  Carol V Robinson; Andrej Sali; Wolfgang Baumeister
Journal:  Nature       Date:  2007-12-13       Impact factor: 49.962

3.  Recent advances in the production of proteins in insect and mammalian cells for structural biology.

Authors:  Joanne E Nettleship; René Assenberg; Jonathan M Diprose; Nahid Rahman-Huq; Raymond J Owens
Journal:  J Struct Biol       Date:  2010-02-11       Impact factor: 2.867

4.  Production of baculovirus defective interfering particles during serial passage is delayed by removing transposon target sites in fp25k.

Authors:  Lopamudra Giri; Michael G Feiss; Bryony C Bonning; David W Murhammer
Journal:  J Gen Virol       Date:  2011-10-12       Impact factor: 3.891

5.  MultiBac: multigene baculovirus-based eukaryotic protein complex production.

Authors:  Christoph Bieniossek; Timothy J Richmond; Imre Berger
Journal:  Curr Protoc Protein Sci       Date:  2008-02

6.  Spontaneous excision of BAC vector sequences from bacmid-derived baculovirus expression vectors upon passage in insect cells.

Authors:  Gorben P Pijlman; Jessica E van Schijndel; Just M Vlak
Journal:  J Gen Virol       Date:  2003-10       Impact factor: 3.891

Review 7.  Synthetic biology.

Authors:  Steven A Benner; A Michael Sismour
Journal:  Nat Rev Genet       Date:  2005-07       Impact factor: 53.242

Review 8.  Robots, pipelines, polyproteins: enabling multiprotein expression in prokaryotic and eukaryotic cells.

Authors:  Lakshmi Sumitra Vijayachandran; Cristina Viola; Frederic Garzoni; Simon Trowitzsch; Christoph Bieniossek; Maxime Chaillet; Christiane Schaffitzel; Didier Busso; Christophe Romier; Arnaud Poterszman; Timothy J Richmond; Imre Berger
Journal:  J Struct Biol       Date:  2011-03-17       Impact factor: 2.867

Review 9.  MultiBac turns sweet.

Authors:  Dieter Palmberger; Miriam Klausberger; Imre Berger; Reingard Grabherr
Journal:  Bioengineered       Date:  2012-03-01       Impact factor: 3.269

10.  SweetBac: a new approach for the production of mammalianised glycoproteins in insect cells.

Authors:  Dieter Palmberger; Iain B H Wilson; Imre Berger; Reingard Grabherr; Dubravko Rendic
Journal:  PLoS One       Date:  2012-04-02       Impact factor: 3.240

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  17 in total

1.  Baculovirus expression: old dog, new tricks.

Authors:  Imre Berger; Arnaud Poterszman
Journal:  Bioengineered       Date:  2015       Impact factor: 3.269

2.  Comprehensive identification of protein orthologs in the family Ascoviridae facilitates an understanding of phylogenomics, protein conservation, and phosphorylation.

Authors:  Yanhua Shi; Weiping Lin; Jinxin Chu; Guohui Wang; Punan Zhao; Guo-Hua Huang; Dianhai Hou
Journal:  Arch Virol       Date:  2022-03-05       Impact factor: 2.574

3.  Cryo-EM structures of human fucosidase FucA1 reveal insight into substrate recognition and catalysis.

Authors:  Zachary Armstrong; Richard W Meek; Liang Wu; James N Blaza; Gideon J Davies
Journal:  Structure       Date:  2022-07-29       Impact factor: 5.871

4.  The primary familial brain calcification-associated protein MYORG is an α-galactosidase with restricted substrate specificity.

Authors:  Richard W Meek; Jacob Brockerman; Osei B Fordwour; Wesley F Zandberg; Gideon J Davies; David J Vocadlo
Journal:  PLoS Biol       Date:  2022-09-21       Impact factor: 9.593

Review 5.  A review of alternative promoters for optimal recombinant protein expression in baculovirus-infected insect cells.

Authors:  Carissa Grose; Zoe Putman; Dominic Esposito
Journal:  Protein Expr Purif       Date:  2021-06-01       Impact factor: 2.025

Review 6.  MultiBac: from protein complex structures to synthetic viral nanosystems.

Authors:  Martin Pelosse; Hannah Crocker; Barbara Gorda; Paul Lemaire; Jens Rauch; Imre Berger
Journal:  BMC Biol       Date:  2017-10-30       Impact factor: 7.431

7.  Combinatorial regulation of the balance between dynein microtubule end accumulation and initiation of directed motility.

Authors:  Rupam Jha; Johanna Roostalu; Nicholas I Cade; Martina Trokter; Thomas Surrey
Journal:  EMBO J       Date:  2017-10-16       Impact factor: 11.598

8.  New insights into HCV replication in original cells from Aedes mosquitoes.

Authors:  Catherine Fallecker; Alban Caporossi; Yassine Rechoum; Frederic Garzoni; Sylvie Larrat; Olivier François; Pascal Fender; Patrice Morand; Imre Berger; Marie-Anne Petit; Emmanuel Drouet
Journal:  Virol J       Date:  2017-08-22       Impact factor: 4.099

9.  In vitro reconstitution of a highly processive recombinant human dynein complex.

Authors:  Max A Schlager; Ha Thi Hoang; Linas Urnavicius; Simon L Bullock; Andrew P Carter
Journal:  EMBO J       Date:  2014-07-01       Impact factor: 11.598

10.  GoldenBac: a simple, highly efficient, and widely applicable system for construction of multi-gene expression vectors for use with the baculovirus expression vector system.

Authors:  Jana Neuhold; Katharina Radakovics; Anita Lehner; Florian Weissmann; Maria Queralt Garcia; Mari Carmen Romero; Nicholas S Berrow; Peggy Stolt-Bergner
Journal:  BMC Biotechnol       Date:  2020-05-12       Impact factor: 2.563

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