Literature DB >> 23323635

Stabilization of ssRNA on graphene oxide surface: an effective way to design highly robust RNA probes.

Liang Cui1, Zirong Chen, Zhi Zhu, Xiaoyan Lin, Xi Chen, Chaoyong James Yang.   

Abstract

RNA probes constitute an important class of functional nucleic acids (FNAs). However, because of their notorious vulnerability to enzymatic degradation, extremely careful and special protocols must be followed when dealing with RNA probes. To fully use the large number of RNA FNAs available for bioanalysis and biomedicine, it is important to explore effective methods to protect RNA probes from enzymatic digestion. In this work, we systematically demonstrate that graphene oxide (GO) can effectively protect RNA probes from enzymatic digestion. Based on this finding, we propose an effective way to design robust RNA biosensors by simply mixing RNA probes with GO for analysis of nucleic acids, proteins, and small molecules. The entire assay is sensitive, selective, rapid, and more importantly, does not require any special protocols. The ability to protect ssRNA from enzymatic digestion by GO offers an exciting new way to stabilize ssRNA, which will not only provide new opportunities to utilize the large number of currently available, yet rarely explored, RNA FNAs for bioanalysis but also offer a new solution to protect important ssRNA molecules, such as microRNA and antisense ssRNA, for a great variety of biomedical applications.

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Year:  2013        PMID: 23323635     DOI: 10.1021/ac303179z

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  10 in total

1.  A universal aptasensing platform based on cryonase-assisted signal amplification and graphene oxide induced quenching of the fluorescence of labeled nucleic acid probes: application to the detection of theophylline and ATP.

Authors:  Yi-Fei Lou; Yong-Bo Peng; Xiaowei Luo; Zhiming Yang; Ruifeng Wang; Dewen Sun; Lingxiangyu Li; Yuyu Tan; Jiahao Huang; Liang Cui
Journal:  Mikrochim Acta       Date:  2019-07-02       Impact factor: 5.833

2.  RNase H meets molecular beacons: an ultrasensitive fluorometric assay for nucleic acids.

Authors:  Shao-Xiang Wang; Kai-Sheng Liu; Yi-Fei Lou; Shao-Qi Wang; Yong-Bo Peng; Jian-Ping Chen; Jia-Hao Huang; Shou-Xia Xie; Liang Cui; Xiao Wang
Journal:  Mikrochim Acta       Date:  2018-07-14       Impact factor: 5.833

Review 3.  Graphene materials as 2D non-viral gene transfer vector platforms.

Authors:  M Vincent; I de Lázaro; K Kostarelos
Journal:  Gene Ther       Date:  2016-11-22       Impact factor: 5.250

4.  Designing a Biostable L-DNAzyme for Lead(II) Ion Detection in Practical Samples.

Authors:  Hao Liang; Sitao Xie; Liang Cui; Cuichen Wu; Xiaobing Zhang
Journal:  Anal Methods       Date:  2016-09-06       Impact factor: 2.896

5.  Multiplexed determination of intracellular messenger RNA by using a graphene oxide nanoprobe modified with target-recognizing fluorescent oligonucleotides.

Authors:  Hongyan Jiang; Fu-Rong Li; Wei Li; Xiaodong Lu; Kai Ling
Journal:  Mikrochim Acta       Date:  2018-11-15       Impact factor: 5.833

6.  Graphene oxide enhances the specificity of the polymerase chain reaction by modifying primer-template matching.

Authors:  Yuanyuan Wang; Fengbang Wang; Hailin Wang; Maoyong Song
Journal:  Sci Rep       Date:  2017-11-28       Impact factor: 4.379

Review 7.  Graphene Oxide: A Smart (Starting) Material for Natural Methylxanthines Adsorption and Detection.

Authors:  Rita Petrucci; Isabella Chiarotto; Leonardo Mattiello; Daniele Passeri; Marco Rossi; Giuseppe Zollo; And Marta Feroci
Journal:  Molecules       Date:  2019-11-21       Impact factor: 4.411

Review 8.  Opportunities Offered by Graphene Nanoparticles for MicroRNAs Delivery for Amyotrophic Lateral Sclerosis Treatment.

Authors:  Benedetta Niccolini; Valentina Palmieri; Marco De Spirito; Massimiliano Papi
Journal:  Materials (Basel)       Date:  2021-12-24       Impact factor: 3.623

9.  Carbon nanoparticle-protected RNA aptasensor for amplified fluorescent determination of theophylline in serum based on nuclease-aided signal amplification.

Authors:  Xiaoyu Gong; Chi Yu; Yichang Zhang; Yuan Sun; Lin Ye; Juan Li
Journal:  RSC Adv       Date:  2019-10-22       Impact factor: 4.036

10.  OBP14 (Odorant-Binding Protein) Sensing in Adelphocoris lineolatus Based on Peptide Nucleic Acid and Graphene Oxide.

Authors:  Wenhua Tian; Tao Zhang; Shaohua Gu; Yuyuan Guo; Xiwu Gao; Yongjun Zhang
Journal:  Insects       Date:  2021-05-08       Impact factor: 2.769

  10 in total

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