Literature DB >> 23322567

Identification of a candidate gene for astigmatism.

Margarida C Lopes1, Pirro G Hysi, Virginie J M Verhoeven, Stuart Macgregor, Alex W Hewitt, Grant W Montgomery, Phillippa Cumberland, Johannes R Vingerling, Terri L Young, Cornelia M van Duijn, Ben Oostra, Andre G Uitterlinden, Jugnoo S Rahi, David A Mackey, Caroline C W Klaver, Toby Andrew, Christopher J Hammond.   

Abstract

PURPOSE: Astigmatism is a common refractive error that reduces vision, where the curvature and refractive power of the cornea in one meridian are less than those of the perpendicular axis. It is a complex trait likely to be influenced by both genetic and environmental factors. Twin studies of astigmatism have found approximately 60% of phenotypic variance is explained by genetic factors. This study aimed to identify susceptibility loci for astigmatism.
METHODS: We performed a meta-analysis of seven genome-wide association studies that included 22,100 individuals of European descent, where astigmatism was defined as the number of diopters of cylinder prescription, using fixed effect inverse variance-weighted methods.
RESULTS: A susceptibility locus was identified with lead single nucleotide polymorphism rs3771395 on chromosome 2p13.3 (meta-analysis, P = 1.97 × 10(-7)) in the VAX2 gene. VAX2 plays an important role in the development of the dorsoventral axis of the eye. Animal studies have shown a gradient in astigmatism along the vertical plane, with corresponding changes in refraction, particularly in the ventral field.
CONCLUSIONS: This finding advances the understanding of refractive error, and provides new potential pathways to be evaluated with regard to the development of astigmatism.

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Year:  2013        PMID: 23322567      PMCID: PMC3576051          DOI: 10.1167/iovs.12-10463

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  47 in total

1.  Merlin--rapid analysis of dense genetic maps using sparse gene flow trees.

Authors:  Gonçalo R Abecasis; Stacey S Cherny; William O Cookson; Lon R Cardon
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2.  Prevalence of astigmatism among students in northern Greece.

Authors:  A T Mandalos; D K Peios; T A Mavrakanas; V A Golias; K G Megalou; K A Delidou; A C Gregoriadou; B C Katsougiannopoulos
Journal:  Eur J Ophthalmol       Date:  2002 Jan-Feb       Impact factor: 2.597

3.  Astigmatism and its determinants in the Tehran population: the Tehran eye study.

Authors:  Hassan Hashemi; Elham Hatef; Akbar Fotouhi; Kazem Mohammad
Journal:  Ophthalmic Epidemiol       Date:  2005-12       Impact factor: 1.648

4.  Choroidal retinoic acid synthesis: a possible mediator between refractive error and compensatory eye growth.

Authors:  J R Mertz; J Wallman
Journal:  Exp Eye Res       Date:  2000-04       Impact factor: 3.467

5.  Corneal topographic features in a family with nanophthalmos.

Authors:  Sathish Srinivasan; Mark Batterbury; Ian B Marsh; Anthony C Fisher; Colin Willoughby; Stephen B Kaye
Journal:  Cornea       Date:  2006-07       Impact factor: 2.651

6.  GWAMA: software for genome-wide association meta-analysis.

Authors:  Reedik Mägi; Andrew P Morris
Journal:  BMC Bioinformatics       Date:  2010-05-28       Impact factor: 3.169

7.  High corneal astigmatism in Navajo school children and its effect on classroom performance.

Authors:  J M Garber
Journal:  J Am Optom Assoc       Date:  1981-07

8.  Novel mutation in sonic hedgehog in non-syndromic colobomatous microphthalmia.

Authors:  Lisa A Schimmenti; June de la Cruz; Richard Alan Lewis; J D Karkera; Glenda S Manligas; Erich Roessler; Maximilian Muenke
Journal:  Am J Med Genet A       Date:  2003-01-30       Impact factor: 2.802

9.  A homeobox gene, vax2, controls the patterning of the eye dorsoventral axis.

Authors:  A M Barbieri; G Lupo; A Bulfone; M Andreazzoli; M Mariani; F Fougerousse; G G Consalez; G Borsani; J S Beckmann; G Barsacchi; A Ballabio; S Banfi
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-14       Impact factor: 11.205

10.  Genome-wide meta-analysis of five Asian cohorts identifies PDGFRA as a susceptibility locus for corneal astigmatism.

Authors:  Qiao Fan; Xin Zhou; Chiea-Chuen Khor; Ching-Yu Cheng; Liang-Kee Goh; Xueling Sim; Wan-Ting Tay; Yi-Ju Li; Rick Twee-Hee Ong; Chen Suo; Belinda Cornes; Mohammad Kamran Ikram; Kee-Seng Chia; Mark Seielstad; Jianjun Liu; Eranga Vithana; Terri L Young; E-Shyong Tai; Tien-Yin Wong; Tin Aung; Yik-Ying Teo; Seang-Mei Saw
Journal:  PLoS Genet       Date:  2011-12-01       Impact factor: 5.917

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  12 in total

1.  Evaluation of transethnic fine mapping with population-specific and cosmopolitan imputation reference panels in diverse Asian populations.

Authors:  Xu Wang; Ching-Yu Cheng; Jiemin Liao; Xueling Sim; Jianjun Liu; Kee-Seng Chia; E-Shyong Tai; Peter Little; Chiea-Chuen Khor; Tin Aung; Tien-Yin Wong; Yik-Ying Teo
Journal:  Eur J Hum Genet       Date:  2015-07-01       Impact factor: 4.246

2.  Refractive, corneal and ocular residual astigmatism: distribution in a German population and age-dependency - the Gutenberg health study.

Authors:  Alexander Karl-Georg Schuster; Norbert Pfeiffer; Andreas Schulz; René Hoehn; Katharina A Ponto; Philipp S Wild; Maria Blettner; Manfred E Beutel; Karl J Lackner; Thomas Münzel; Alireza Mirshahi
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2017-08-19       Impact factor: 3.117

3.  Astigmatism and myopia in Tohono O'odham Native American children.

Authors:  J Daniel Twelker; Joseph M Miller; Duane L Sherrill; Erin M Harvey
Journal:  Optom Vis Sci       Date:  2013-11       Impact factor: 1.973

4.  The prevalence of vision impairment and refractive error in 3654 first year students at Tianjin Medical University.

Authors:  Xue-Ying Shi; Yi-Feng Ke; Nan Jin; Hong-Mei Zhang; Rui-Hua Wei; Xiao-Rong Li
Journal:  Int J Ophthalmol       Date:  2018-10-18       Impact factor: 1.779

5.  On the analysis of a repeated measure design in genome-wide association analysis.

Authors:  Young Lee; Suyeon Park; Sanghoon Moon; Juyoung Lee; Robert C Elston; Woojoo Lee; Sungho Won
Journal:  Int J Environ Res Public Health       Date:  2014-11-28       Impact factor: 3.390

6.  Genome-wide association study for refractive astigmatism reveals genetic co-determination with spherical equivalent refractive error: the CREAM consortium.

Authors:  Qing Li; Robert Wojciechowski; Claire L Simpson; Pirro G Hysi; Virginie J M Verhoeven; Mohammad Kamran Ikram; René Höhn; Veronique Vitart; Alex W Hewitt; Konrad Oexle; Kari-Matti Mäkelä; Stuart MacGregor; Mario Pirastu; Qiao Fan; Ching-Yu Cheng; Beaté St Pourcain; George McMahon; John P Kemp; Kate Northstone; Jugnoo S Rahi; Phillippa M Cumberland; Nicholas G Martin; Paul G Sanfilippo; Yi Lu; Ya Xing Wang; Caroline Hayward; Ozren Polašek; Harry Campbell; Goran Bencic; Alan F Wright; Juho Wedenoja; Tanja Zeller; Arne Schillert; Alireza Mirshahi; Karl Lackner; Shea Ping Yip; Maurice K H Yap; Janina S Ried; Christian Gieger; Federico Murgia; James F Wilson; Brian Fleck; Seyhan Yazar; Johannes R Vingerling; Albert Hofman; André Uitterlinden; Fernando Rivadeneira; Najaf Amin; Lennart Karssen; Ben A Oostra; Xin Zhou; Yik-Ying Teo; E Shyong Tai; Eranga Vithana; Veluchamy Barathi; Yingfeng Zheng; Rosalynn Grace Siantar; Kumari Neelam; Youchan Shin; Janice Lam; Ekaterina Yonova-Doing; Cristina Venturini; S Mohsen Hosseini; Hoi-Suen Wong; Terho Lehtimäki; Mika Kähönen; Olli Raitakari; Nicholas J Timpson; David M Evans; Chiea-Chuen Khor; Tin Aung; Terri L Young; Paul Mitchell; Barbara Klein; Cornelia M van Duijn; Thomas Meitinger; Jost B Jonas; Paul N Baird; David A Mackey; Tien Yin Wong; Seang-Mei Saw; Olavi Pärssinen; Dwight Stambolian; Christopher J Hammond; Caroline C W Klaver; Cathy Williams; Andrew D Paterson; Joan E Bailey-Wilson; Jeremy A Guggenheim
Journal:  Hum Genet       Date:  2014-11-04       Impact factor: 4.132

7.  A role for VAX2 in correct retinal function revealed by a novel genomic deletion at 2p13.3 causing distal Renal Tubular Acidosis: case report.

Authors:  Elizabeth E Norgett; Anthony Yii; Katherine G Blake-Palmer; Mostafa Sharifian; Louise E Allen; Abdolhamid Najafi; Ariana Kariminejad; Fiona E Karet Frankl
Journal:  BMC Med Genet       Date:  2015-06-13       Impact factor: 2.103

8.  A genome-wide association study of corneal astigmatism: The CREAM Consortium.

Authors:  Rupal L Shah; Qing Li; Wanting Zhao; Milly S Tedja; J Willem L Tideman; Anthony P Khawaja; Qiao Fan; Seyhan Yazar; Katie M Williams; Virginie J M Verhoeven; Jing Xie; Ya Xing Wang; Moritz Hess; Stefan Nickels; Karl J Lackner; Olavi Pärssinen; Juho Wedenoja; Ginevra Biino; Maria Pina Concas; André Uitterlinden; Fernando Rivadeneira; Vincent W V Jaddoe; Pirro G Hysi; Xueling Sim; Nicholas Tan; Yih-Chung Tham; Sonoko Sensaki; Albert Hofman; Johannes R Vingerling; Jost B Jonas; Paul Mitchell; Christopher J Hammond; René Höhn; Paul N Baird; Tien-Yin Wong; Chinfsg-Yu Cheng; Yik Ying Teo; David A Mackey; Cathy Williams; Seang-Mei Saw; Caroline C W Klaver; Jeremy A Guggenheim; Joan E Bailey-Wilson
Journal:  Mol Vis       Date:  2018-02-05       Impact factor: 2.367

9.  Preoperative corneal astigmatism among adult patients with cataract in Northern Nigeria.

Authors:  Mohammed Isyaku; Syed A Ali; Sadiq Hassan
Journal:  Indian J Ophthalmol       Date:  2014-11       Impact factor: 1.848

10.  Detecting Long-Term Balancing Selection Using Allele Frequency Correlation.

Authors:  Katherine M Siewert; Benjamin F Voight
Journal:  Mol Biol Evol       Date:  2017-11-01       Impact factor: 16.240

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