Literature DB >> 23312353

Single-molecule spectroscopy of protein folding dynamics--expanding scope and timescales.

Benjamin Schuler1, Hagen Hofmann.   

Abstract

Single-molecule spectroscopy has developed into an important method for probing protein structure and dynamics, especially in structurally heterogeneous systems. A broad range of questions in the diversifying field of protein folding have been addressed with single-molecule Förster resonance energy transfer (FRET) and photo-induced electron transfer (PET). Building on more than a decade of rapid method development, these techniques can now be used to investigate a wide span of timescales, an aspect that we focus on in this review. Important current topics range from the structure and dynamics of unfolded and intrinsically disordered proteins, including the coupling of folding and binding, to transition path times, the folding and misfolding of larger proteins, and their interactions with molecular chaperones.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23312353     DOI: 10.1016/j.sbi.2012.10.008

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  79 in total

1.  Application of fluorescence resonance energy transfer in protein studies.

Authors:  Linlin Ma; Fan Yang; Jie Zheng
Journal:  J Mol Struct       Date:  2014-11-05       Impact factor: 3.196

2.  Dimensions, energetics, and denaturant effects of the protein unstructured state.

Authors:  Maodong Li; Zhirong Liu
Journal:  Protein Sci       Date:  2016-01-05       Impact factor: 6.725

3.  Microfluidic mixer designed for performing single-molecule kinetics with confocal detection on timescales from milliseconds to minutes.

Authors:  Bengt Wunderlich; Daniel Nettels; Stephan Benke; Jennifer Clark; Sascha Weidner; Hagen Hofmann; Shawn H Pfeil; Benjamin Schuler
Journal:  Nat Protoc       Date:  2013-07-11       Impact factor: 13.491

4.  Ultrafast folding kinetics and cooperativity of villin headpiece in single-molecule force spectroscopy.

Authors:  Gabriel Žoldák; Johannes Stigler; Benjamin Pelz; Hongbin Li; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-21       Impact factor: 11.205

Review 5.  The bright future of single-molecule fluorescence imaging.

Authors:  Manuel F Juette; Daniel S Terry; Michael R Wasserman; Zhou Zhou; Roger B Altman; Qinsi Zheng; Scott C Blanchard
Journal:  Curr Opin Chem Biol       Date:  2014-06-21       Impact factor: 8.822

6.  Single-molecule spectroscopy of protein conformational dynamics in live eukaryotic cells.

Authors:  Iwo König; Arash Zarrine-Afsar; Mikayel Aznauryan; Andrea Soranno; Bengt Wunderlich; Fabian Dingfelder; Jakob C Stüber; Andreas Plückthun; Daniel Nettels; Benjamin Schuler
Journal:  Nat Methods       Date:  2015-07-06       Impact factor: 28.547

7.  Simultaneous Determination of Two Subdomain Folding Rates Using the "Transfer-Quench" Method.

Authors:  Gil Rahamim; Dan Amir; Elisha Haas
Journal:  Biophys J       Date:  2017-05-09       Impact factor: 4.033

8.  Relation between single-molecule properties and phase behavior of intrinsically disordered proteins.

Authors:  Gregory L Dignon; Wenwei Zheng; Robert B Best; Young C Kim; Jeetain Mittal
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-14       Impact factor: 11.205

9.  Quantitative interpretation of FRET experiments via molecular simulation: force field and validation.

Authors:  Robert B Best; Hagen Hofmann; Daniel Nettels; Benjamin Schuler
Journal:  Biophys J       Date:  2015-06-02       Impact factor: 4.033

10.  Origin of Internal Friction in Disordered Proteins Depends on Solvent Quality.

Authors:  Wenwei Zheng; Hagen Hofmann; Benjamin Schuler; Robert B Best
Journal:  J Phys Chem B       Date:  2018-10-02       Impact factor: 2.991

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