Literature DB >> 23293919

Interannual variation in effective number of breeders and estimation of effective population size in long-lived iteroparous lake sturgeon (Acipenser fulvescens).

Thuy Yen Duong1, Kim T Scribner, Patrick S Forsythe, James A Crossman, Edward A Baker.   

Abstract

Quantifying interannual variation in effective adult breeding number (N(b)) and relationships between N(b), effective population size (N(e)), adult census size (N) and population demographic characteristics are important to predict genetic changes in populations of conservation concern. Such relationships are rarely available for long-lived iteroparous species like lake sturgeon (Acipenser fulvescens). We estimated annual N(b) and generational N(e) using genotypes from 12 microsatellite loci for lake sturgeon adults (n = 796) captured during ten spawning seasons and offspring (n = 3925) collected during larval dispersal in a closed population over 8 years. Inbreeding and variance N(b) estimated using mean and variance in individual reproductive success derived from genetically identified parentage and using linkage disequilibrium (LD) were similar within and among years (interannual range of N(b) across estimators: 41-205). Variance in reproductive success and unequal sex ratios reduced N(b) relative to N on average 36.8% and 16.3%, respectively. Interannual variation in N(b)/N ratios (0.27-0.86) resulted from stable N and low standardized variance in reproductive success due to high proportions of adults breeding and the species' polygamous mating system, despite a 40-fold difference in annual larval production across years (437-16 417). Results indicated environmental conditions and features of the species' reproductive ecology interact to affect demographic parameters and N(b)/N. Estimates of N(e) based on three single-sample estimators, including LD, approximate Bayesian computation and sibship assignment, were similar to annual estimates of N(b). Findings have important implications concerning applications of genetic monitoring in conservation planning for lake sturgeon and other species with similar life histories and mating systems.
© 2013 Blackwell Publishing Ltd.

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Year:  2013        PMID: 23293919     DOI: 10.1111/mec.12167

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  10 in total

1.  Retention of Ancestral Genetic Variation Across Life-Stages of an Endangered, Long-Lived Iteroparous Fish.

Authors:  Evan W Carson; Thomas F Turner; Melody J Saltzgiver; Deborah Adams; Brian R Kesner; Paul C Marsh; Tyler J Pilger; Thomas E Dowling
Journal:  J Hered       Date:  2016-05-25       Impact factor: 2.645

2.  Making sense of the relationships between Ne, Nb and Nc towards defining conservation thresholds in Atlantic salmon (Salmo salar).

Authors:  A-L Ferchaud; C Perrier; J April; C Hernandez; M Dionne; L Bernatchez
Journal:  Heredity (Edinb)       Date:  2016-08-17       Impact factor: 3.821

3.  Effects of overlapping generations on linkage disequilibrium estimates of effective population size.

Authors:  Robin S Waples; Tiago Antao; Gordon Luikart
Journal:  Genetics       Date:  2014-04-08       Impact factor: 4.562

4.  Highly Connected Populations and Temporal Stability in Allelic Frequencies of a Harvested Crab from the Southern Pacific Coast.

Authors:  Noemi Rojas-Hernandez; David Veliz; Marcela P Riveros; Juan P Fuentes; Luis M Pardo
Journal:  PLoS One       Date:  2016-11-04       Impact factor: 3.240

5.  RNA-sequencing of the sturgeon Acipenser baeri provides insights into expression dynamics of morphogenic differentiation and developmental regulatory genes in early versus late developmental stages.

Authors:  Wei Song; Keji Jiang; Fengying Zhang; Yu Lin; Lingbo Ma
Journal:  BMC Genomics       Date:  2016-08-08       Impact factor: 3.969

6.  Genetic substructure and admixture as important factors in linkage disequilibrium-based estimation of effective number of breeders in recovering wildlife populations.

Authors:  Alexander Kopatz; Hans Geir Eiken; Julia Schregel; Jouni Aspi; Ilpo Kojola; Snorre B Hagen
Journal:  Ecol Evol       Date:  2017-11-07       Impact factor: 2.912

7.  Rethinking the influence of hydroelectric development on gene flow in a long-lived fish, the Lake Sturgeon Acipenser fulvescens.

Authors:  Craig A McDougall; Amy B Welsh; Thierry Gosselin; W Gary Anderson; Patrick A Nelson
Journal:  PLoS One       Date:  2017-03-22       Impact factor: 3.240

8.  Population genomic monitoring provides insight into conservation status but no correlation with demographic estimates of extinction risk in a threatened trout.

Authors:  William Hemstrom; Daniel Dauwalter; Mary M Peacock; Douglas Leasure; Seth Wenger; Michael R Miller; Helen Neville
Journal:  Evol Appl       Date:  2022-09-04       Impact factor: 4.929

9.  Time-series analysis reveals genetic responses to intensive management of razorback sucker (Xyrauchen texanus).

Authors:  Thomas E Dowling; Thomas F Turner; Evan W Carson; Melody J Saltzgiver; Deborah Adams; Brian Kesner; Paul C Marsh
Journal:  Evol Appl       Date:  2013-11-15       Impact factor: 5.183

10.  What remains from a 454 run: estimation of success rates of microsatellite loci development in selected newt species (Calotriton asper, Lissotriton helveticus, and Triturus cristatus) and comparison with Illumina-based approaches.

Authors:  Axel Drechsler; Daniel Geller; Katharina Freund; Dirk S Schmeller; Sven Künzel; Oliver Rupp; Adeline Loyau; Mathieu Denoël; Emilio Valbuena-Ureña; Sebastian Steinfartz
Journal:  Ecol Evol       Date:  2013-09-17       Impact factor: 2.912

  10 in total

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