Literature DB >> 23293282

Transcriptional repressors: multifaceted regulators of gene expression.

Nicola Reynolds1, Aoife O'Shaughnessy, Brian Hendrich.   

Abstract

Through decades of research it has been established that some chromatin-modifying proteins can repress transcription, and thus are generally termed 'repressors'. Although classic repressors undoubtedly silence transcription, genome-wide studies have shown that many repressors are associated with actively transcribed loci and that this is a widespread phenomenon. Here, we review the evidence for the presence of repressors at actively transcribed regions and assess what roles they might be playing. We propose that the modulation of expression levels by chromatin-modifying, co-repressor complexes provides transcriptional fine-tuning that drives development.

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Year:  2013        PMID: 23293282     DOI: 10.1242/dev.083105

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  58 in total

1.  Foxd3 Promotes Exit from Naive Pluripotency through Enhancer Decommissioning and Inhibits Germline Specification.

Authors:  Patricia Respuela; Miloš Nikolić; Minjia Tan; Peter Frommolt; Yingming Zhao; Joanna Wysocka; Alvaro Rada-Iglesias
Journal:  Cell Stem Cell       Date:  2016-01-07       Impact factor: 24.633

2.  The plant ESCRT component FREE1 shuttles to the nucleus to attenuate abscisic acid signalling.

Authors:  Hongbo Li; Yingzhu Li; Qiong Zhao; Tingting Li; Juan Wei; Baiying Li; Wenjin Shen; Chao Yang; Yonglun Zeng; Pedro L Rodriguez; Yunde Zhao; Liwen Jiang; Xiaojing Wang; Caiji Gao
Journal:  Nat Plants       Date:  2019-04-08       Impact factor: 15.793

Review 3.  Epigenetics and the dynamics of chromatin during adenovirus infections.

Authors:  Kelsey L Lynch; Linda R Gooding; Charlie Garnett-Benson; David A Ornelles; Daphne C Avgousti
Journal:  FEBS Lett       Date:  2019-12-15       Impact factor: 4.124

4.  Fam60a defines a variant Sin3a-Hdac complex in embryonic stem cells required for self-renewal.

Authors:  Gundula Streubel; Darren J Fitzpatrick; Giorgio Oliviero; Andrea Scelfo; Bruce Moran; Sudipto Das; Nayla Munawar; Ariane Watson; Kieran Wynne; Gian Luca Negri; Eugene T Dillon; SriGanesh Jammula; Karsten Hokamp; Darran P O'Connor; Diego Pasini; Gerard Cagney; Adrian P Bracken
Journal:  EMBO J       Date:  2017-05-29       Impact factor: 11.598

5.  Collaborative repressive action of the antagonistic ETS transcription factors Pointed and Yan fine-tunes gene expression to confer robustness in Drosophila.

Authors:  Jemma L Webber; Jie Zhang; Alex Massey; Nicelio Sanchez-Luege; Ilaria Rebay
Journal:  Development       Date:  2018-07-02       Impact factor: 6.868

6.  Induction of stem-cell-derived functional neurons by NanoScript-based gene repression.

Authors:  Sahishnu Patel; Sy-Tsong Dean Chueng; Perry T Yin; Kholud Dardir; Zhichao Song; Nicholas Pasquale; Kelvin Kwan; Hiroshi Sugiyama; Ki-Bum Lee
Journal:  Angew Chem Int Ed Engl       Date:  2015-08-20       Impact factor: 15.336

7.  RNAi screen in Drosophila larvae identifies histone deacetylase 3 as a positive regulator of the hsp70 heat shock gene expression during heat shock.

Authors:  Bhavana G Achary; Katie M Campbell; Ivy S Co; David S Gilmour
Journal:  Biochim Biophys Acta       Date:  2014-03-06

8.  Arid4b is critical for mouse embryonic stem cell differentiation towards mesoderm and endoderm, linking epigenetics to pluripotency exit.

Authors:  Nihal Terzi Cizmecioglu; Jialiang Huang; Ezgi G Keskin; Xiaofeng Wang; Idil Esen; Fei Chen; Stuart H Orkin
Journal:  J Biol Chem       Date:  2020-10-15       Impact factor: 5.157

9.  Tagging methyl-CpG-binding domain proteins reveals different spatiotemporal expression and supports distinct functions.

Authors:  Kathleen H Wood; Brian S Johnson; Sarah A Welsh; Jun Y Lee; Yue Cui; Elizabeth Krizman; Edward S Brodkin; Julie A Blendy; Michael B Robinson; Marisa S Bartolomei; Zhaolan Zhou
Journal:  Epigenomics       Date:  2016-04-12       Impact factor: 4.778

10.  De Novo Mutations in CHD4, an ATP-Dependent Chromatin Remodeler Gene, Cause an Intellectual Disability Syndrome with Distinctive Dysmorphisms.

Authors:  Karin Weiss; Paulien A Terhal; Lior Cohen; Michael Bruccoleri; Melita Irving; Ariel F Martinez; Jill A Rosenfeld; Keren Machol; Yaping Yang; Pengfei Liu; Magdalena Walkiewicz; Joke Beuten; Natalia Gomez-Ospina; Katrina Haude; Chin-To Fong; Gregory M Enns; Jonathan A Bernstein; Judith Fan; Garrett Gotway; Mohammad Ghorbani; Koen van Gassen; Glen R Monroe; Gijs van Haaften; Lina Basel-Vanagaite; Xiang-Jiao Yang; Philippe M Campeau; Maximilian Muenke
Journal:  Am J Hum Genet       Date:  2016-09-08       Impact factor: 11.025

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