Literature DB >> 23287289

Profiling and inhibiting reversible palmitoylation.

Jeannie L Hernandez1, Jaimeen D Majmudar, Brent R Martin.   

Abstract

Protein palmitoylation describes the posttranslational modification of cysteines by a thioester-linked long-chain fatty acid. This modification is critical for membrane association, spatial organization, and the proper activity of hundreds of membrane-associated proteins. Palmitoylation is continuously remodeled, both by spontaneous hydrolysis and enzyme-mediated de-palmitoylation. Bioorthogonal pulse-chase labeling approaches have highlighted the role of protein thioesterases as key regulators of palmitoylation dynamics. Importantly, thioesterases are critical for regulating the spatial organization of key oncogenic proteins, such as Ras GTPases. New inhibitors, probes, and proteomics methods have put a spotlight on this emerging posttranslational modification. These tools promise to advance our understanding the enzymatic regulation of dynamic palmitoylation, and present new opportunities for drug development.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23287289      PMCID: PMC3594063          DOI: 10.1016/j.cbpa.2012.11.023

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  47 in total

1.  The palmitoylation machinery is a spatially organizing system for peripheral membrane proteins.

Authors:  Oliver Rocks; Marc Gerauer; Nachiket Vartak; Sebastian Koch; Zhi-Ping Huang; Markos Pechlivanis; Jürgen Kuhlmann; Lucas Brunsveld; Anchal Chandra; Bernhard Ellinger; Herbert Waldmann; Philippe I H Bastiaens
Journal:  Cell       Date:  2010-04-22       Impact factor: 41.582

2.  Palmitoylated proteins: purification and identification.

Authors:  Junmei Wan; Amy F Roth; Aaron O Bailey; Nicholas G Davis
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

3.  Deregulation of scribble promotes mammary tumorigenesis and reveals a role for cell polarity in carcinoma.

Authors:  Lixing Zhan; Avi Rosenberg; Kenneth C Bergami; Min Yu; Zhenyu Xuan; Aron B Jaffe; Craig Allred; Senthil K Muthuswamy
Journal:  Cell       Date:  2008-11-28       Impact factor: 41.582

4.  Robust fluorescent detection of protein fatty-acylation with chemical reporters.

Authors:  Guillaume Charron; Mingzi M Zhang; Jacob S Yount; John Wilson; Anuradha S Raghavan; Eliah Shamir; Howard C Hang
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

5.  Mode of action of tetrahydrolipstatin: a derivative of the naturally occurring lipase inhibitor lipstatin.

Authors:  B Borgström
Journal:  Biochim Biophys Acta       Date:  1988-10-14

6.  Large-scale profiling of protein palmitoylation in mammalian cells.

Authors:  Brent R Martin; Benjamin F Cravatt
Journal:  Nat Methods       Date:  2009-01-11       Impact factor: 28.547

7.  A coordinated local translational control point at the synapse involving relief from silencing and MOV10 degradation.

Authors:  Sourav Banerjee; Pierre Neveu; Kenneth S Kosik
Journal:  Neuron       Date:  2009-12-24       Impact factor: 17.173

8.  A functional screen implicates microRNA-138-dependent regulation of the depalmitoylation enzyme APT1 in dendritic spine morphogenesis.

Authors:  Gabriele Siegel; Gregor Obernosterer; Roberto Fiore; Martin Oehmen; Silvia Bicker; Mette Christensen; Sharof Khudayberdiev; Philipp F Leuschner; Clara J L Busch; Christina Kane; Katja Hübel; Frank Dekker; Christian Hedberg; Balamurugan Rengarajan; Carsten Drepper; Herbert Waldmann; Sakari Kauppinen; Michael E Greenberg; Andreas Draguhn; Marc Rehmsmeier; Javier Martinez; Gerhard M Schratt
Journal:  Nat Cell Biol       Date:  2009-05-24       Impact factor: 28.824

9.  Neural palmitoyl-proteomics reveals dynamic synaptic palmitoylation.

Authors:  Rujun Kang; Junmei Wan; Pamela Arstikaitis; Hideto Takahashi; Kun Huang; Aaron O Bailey; James X Thompson; Amy F Roth; Renaldo C Drisdel; Ryan Mastro; William N Green; John R Yates; Nicholas G Davis; Alaa El-Husseini
Journal:  Nature       Date:  2008-12-18       Impact factor: 49.962

10.  Identification of selective inhibitors of uncharacterized enzymes by high-throughput screening with fluorescent activity-based probes.

Authors:  Daniel A Bachovchin; Steven J Brown; Hugh Rosen; Benjamin F Cravatt
Journal:  Nat Biotechnol       Date:  2009-03-29       Impact factor: 54.908

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  20 in total

Review 1.  How to Target Activated Ras Proteins: Direct Inhibition vs. Induced Mislocalization.

Authors:  Ethan J Brock; Kyungmin Ji; John J Reiners; Raymond R Mattingly
Journal:  Mini Rev Med Chem       Date:  2016       Impact factor: 3.862

2.  Host Cell-catalyzed S-Palmitoylation Mediates Golgi Targeting of the Legionella Ubiquitin Ligase GobX.

Authors:  Yi-Han Lin; Alexandra G Doms; Eric Cheng; Byoungkwan Kim; Timothy R Evans; Matthias P Machner
Journal:  J Biol Chem       Date:  2015-08-27       Impact factor: 5.157

Review 3.  Targeting RAS Membrane Association: Back to the Future for Anti-RAS Drug Discovery?

Authors:  Adrienne D Cox; Channing J Der; Mark R Philips
Journal:  Clin Cancer Res       Date:  2015-04-15       Impact factor: 12.531

4.  Bioorthogonal Chemical Reporters for Monitoring Unsaturated Fatty-Acylated Proteins.

Authors:  Emmanuelle Thinon; Avital Percher; Howard C Hang
Journal:  Chembiochem       Date:  2016-07-29       Impact factor: 3.164

5.  Measuring S-Depalmitoylation Activity In Vitro and In Live Cells with Fluorescent Probes.

Authors:  Rahul S Kathayat; Bryan C Dickinson
Journal:  Methods Mol Biol       Date:  2019

6.  APT2 Inhibition Restores Scribble Localization and S-Palmitoylation in Snail-Transformed Cells.

Authors:  Jeannie L Hernandez; Dahvid Davda; Melanie Cheung See Kit; Jaimeen D Majmudar; Sang Joon Won; Margery Gang; Sirisha C Pasupuleti; Alexandria I Choi; Callie M Bartkowiak; Brent R Martin
Journal:  Cell Chem Biol       Date:  2017-01-05       Impact factor: 8.116

7.  Selective Enrichment and Direct Analysis of Protein S-Palmitoylation Sites.

Authors:  Emmanuelle Thinon; Joseph P Fernandez; Henrik Molina; Howard C Hang
Journal:  J Proteome Res       Date:  2018-04-06       Impact factor: 4.466

Review 8.  Protein depalmitoylases.

Authors:  Sang Joon Won; Melanie Cheung See Kit; Brent R Martin
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-12-14       Impact factor: 8.250

9.  Acyl protein thioesterase inhibitors as probes of dynamic S-palmitoylation.

Authors:  Dahvid Davda; Brent R Martin
Journal:  Medchemcomm       Date:  2014-03       Impact factor: 3.597

10.  Lysophospholipases cooperate to mediate lipid homeostasis and lysophospholipid signaling.

Authors:  James A Wepy; James J Galligan; Philip J Kingsley; Shu Xu; Michael C Goodman; Keri A Tallman; Carol A Rouzer; Lawrence J Marnett
Journal:  J Lipid Res       Date:  2018-11-27       Impact factor: 5.922

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