Literature DB >> 19137006

Large-scale profiling of protein palmitoylation in mammalian cells.

Brent R Martin1, Benjamin F Cravatt.   

Abstract

S-palmitoylation is a pervasive post-translational modification required for the trafficking, compartmentalization and membrane tethering of many proteins. We demonstrate that the commercially available compound 17-octadecynoic acid (17-ODYA) can serve as a bioorthogonal, click chemistry probe for in situ labeling, identification and verification of palmitoylated proteins in human cells. We identified approximately 125 predicted palmitoylated proteins, including G proteins, receptors and a family of uncharacterized hydrolases whose plasma membrane localization depends on palmitoylation.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19137006      PMCID: PMC2775068          DOI: 10.1038/nmeth.1293

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  15 in total

1.  Activity-based protein profiling: the serine hydrolases.

Authors:  Y Liu; M P Patricelli; B F Cravatt
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

2.  Global analysis of protein palmitoylation in yeast.

Authors:  Amy F Roth; Junmei Wan; Aaron O Bailey; Beimeng Sun; Jason A Kuchar; William N Green; Brett S Phinney; John R Yates; Nicholas G Davis
Journal:  Cell       Date:  2006-06-02       Impact factor: 41.582

3.  Comparison of label-free methods for quantifying human proteins by shotgun proteomics.

Authors:  William M Old; Karen Meyer-Arendt; Lauren Aveline-Wolf; Kevin G Pierce; Alex Mendoza; Joel R Sevinsky; Katheryn A Resing; Natalie G Ahn
Journal:  Mol Cell Proteomics       Date:  2005-06-23       Impact factor: 5.911

4.  Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry.

Authors:  Joshua E Elias; Steven P Gygi
Journal:  Nat Methods       Date:  2007-03       Impact factor: 28.547

Review 5.  Palmitoylation: policing protein stability and traffic.

Authors:  Maurine E Linder; Robert J Deschenes
Journal:  Nat Rev Mol Cell Biol       Date:  2007-01       Impact factor: 94.444

6.  Protection against oxidative stress-induced cell death by intracellular platelet-activating factor-acetylhydrolase II.

Authors:  A Matsuzawa; K Hattori; J Aoki; H Arai; K Inoue
Journal:  J Biol Chem       Date:  1997-12-19       Impact factor: 5.157

7.  Direct analysis of protein complexes using mass spectrometry.

Authors:  A J Link; J Eng; D M Schieltz; E Carmack; G J Mize; D R Morris; B M Garvik; J R Yates
Journal:  Nat Biotechnol       Date:  1999-07       Impact factor: 54.908

8.  Role of cytochrome P-450 in elevating renal vascular tone in spontaneously hypertensive rats.

Authors:  D Gebremedhin; Y H Ma; J D Imig; D R Harder; R J Roman
Journal:  J Vasc Res       Date:  1993 Jan-Feb       Impact factor: 1.934

9.  Myristoyl CoA:protein N-myristoyltransferase activities from rat liver and yeast possess overlapping yet distinct peptide substrate specificities.

Authors:  D A Towler; S P Adams; S R Eubanks; D S Towery; E Jackson-Machelski; L Glaser; J I Gordon
Journal:  J Biol Chem       Date:  1988-02-05       Impact factor: 5.157

10.  Identification of palmitoylated mitochondrial proteins using a bio-orthogonal azido-palmitate analogue.

Authors:  Morris A Kostiuk; Maria M Corvi; Bernd O Keller; Greg Plummer; Jennifer A Prescher; Matthew J Hangauer; Carolyn R Bertozzi; Gurram Rajaiah; John R Falck; Luc G Berthiaume
Journal:  FASEB J       Date:  2007-10-30       Impact factor: 5.191

View more
  216 in total

1.  Activity-based protein profiling identifies a host enzyme, carboxylesterase 1, which is differentially active during hepatitis C virus replication.

Authors:  David R Blais; Rodney K Lyn; Michael A Joyce; Yanouchka Rouleau; Rineke Steenbergen; Nicola Barsby; Lin-Fu Zhu; Adrian F Pegoraro; Albert Stolow; David L Tyrrell; John Paul Pezacki
Journal:  J Biol Chem       Date:  2010-06-08       Impact factor: 5.157

2.  Palmitoylated calnexin is a key component of the ribosome-translocon complex.

Authors:  Asvin Kk Lakkaraju; Laurence Abrami; Thomas Lemmin; Sanja Blaskovic; Béatrice Kunz; Akio Kihara; Matteo Dal Peraro; Françoise Gisou van der Goot
Journal:  EMBO J       Date:  2012-02-07       Impact factor: 11.598

3.  Tandem fluorescence imaging of dynamic S-acylation and protein turnover.

Authors:  Mingzi M Zhang; Lun K Tsou; Guillaume Charron; Anuradha S Raghavan; Howard C Hang
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-26       Impact factor: 11.205

4.  Proteomic analysis of fatty-acylated proteins in mammalian cells with chemical reporters reveals S-acylation of histone H3 variants.

Authors:  John P Wilson; Anuradha S Raghavan; Yu-Ying Yang; Guillaume Charron; Howard C Hang
Journal:  Mol Cell Proteomics       Date:  2010-11-14       Impact factor: 5.911

5.  Plasma membrane association of p63 Rho guanine nucleotide exchange factor (p63RhoGEF) is mediated by palmitoylation and is required for basal activity in cells.

Authors:  Mohamed Aittaleb; Akiyuki Nishimura; Maurine E Linder; John J G Tesmer
Journal:  J Biol Chem       Date:  2011-08-10       Impact factor: 5.157

6.  Lipopolysaccharide Upregulates Palmitoylated Enzymes of the Phosphatidylinositol Cycle: An Insight from Proteomic Studies.

Authors:  Justyna Sobocińska; Paula Roszczenko-Jasińska; Monika Zaręba-Kozioł; Aneta Hromada-Judycka; Orest V Matveichuk; Gabriela Traczyk; Katarzyna Łukasiuk; Katarzyna Kwiatkowska
Journal:  Mol Cell Proteomics       Date:  2017-12-07       Impact factor: 5.911

7.  Peptide lipidation stabilizes structure to enhance biological function.

Authors:  Brian P Ward; Nickki L Ottaway; Diego Perez-Tilve; Dejian Ma; Vasily M Gelfanov; Matthias H Tschöp; Richard D Dimarchi
Journal:  Mol Metab       Date:  2013-09-05       Impact factor: 7.422

Review 8.  Mammalian alpha beta hydrolase domain (ABHD) proteins: Lipid metabolizing enzymes at the interface of cell signaling and energy metabolism.

Authors:  Caleb C Lord; Gwynneth Thomas; J Mark Brown
Journal:  Biochim Biophys Acta       Date:  2013-01-14

9.  Proteomic Analysis of S-Palmitoylated Proteins in Ocular Lens Reveals Palmitoylation of AQP5 and MP20.

Authors:  Zhen Wang; Kevin L Schey
Journal:  Invest Ophthalmol Vis Sci       Date:  2018-11-01       Impact factor: 4.799

10.  Polycystin-1, the product of the polycystic kidney disease gene PKD1, is post-translationally modified by palmitoylation.

Authors:  Kasturi Roy; Ethan P Marin
Journal:  Mol Biol Rep       Date:  2018-08-02       Impact factor: 2.316

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.