Literature DB >> 23286078

Atlas-based probabilistic fibroglandular tissue segmentation in breast MRI.

Shandong Wu1, Susan Weinstein, Despina Kontos.   

Abstract

In this paper we propose an atlas-aided probabilistic model-based segmentation method for estimating the fibroglandular tissue in breast MRI, where a novel fibroglandular tissue atlas is learned to aid the segmentation. The atlas represents a pixel-wise likelihood of being fibroglandular tissue in the breast, which is derived by combining deformable image warping, using aligned breast contour points as landmarks, with a kernel density estimation technique. A mixture multivariate model is learned to characterize the breast tissue using MR image features, and the segmentation is subsequently based on examining the posterior probability where the learned atlas is incorporated as the prior probability. In our experiments, the algorithm-generated segmentation results of 10 cases are compared to the manual segmentations, verified by an experienced breast imaging radiologist, to assess the accuracy of the algorithm, where the Dice's Similarity Coefficient (DSC) shows a 0.85 agreement. The proposed automated segmentation method could be used to estimate the volumetric amount of fibroglandular tissue in the breast for breast cancer risk estimation.

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Year:  2012        PMID: 23286078      PMCID: PMC4180245          DOI: 10.1007/978-3-642-33418-4_54

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  11 in total

1.  Background parenchymal enhancement at breast MR imaging and breast cancer risk.

Authors:  Valencia King; Jennifer D Brooks; Jonine L Bernstein; Anne S Reiner; Malcolm C Pike; Elizabeth A Morris
Journal:  Radiology       Date:  2011-04-14       Impact factor: 11.105

2.  Improving parenchyma segmentation by simultaneous estimation of tissue property T1 map and group-wise registration of inversion recovery MR breast images.

Authors:  Ye Xing; Zhong Xue; Sarah Englander; Mitchell Schnall; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

3.  MRI tissue classification and bias field estimation based on coherent local intensity clustering: a unified energy minimization framework.

Authors:  Chunming Li; Chenyang Xu; Adam W Anderson; John C Gore
Journal:  Inf Process Med Imaging       Date:  2009

4.  Automated analysis of mammographic densities.

Authors:  J W Byng; N F Boyd; E Fishell; R A Jong; M J Yaffe
Journal:  Phys Med Biol       Date:  1996-05       Impact factor: 3.609

5.  A nonparametric method for automatic correction of intensity nonuniformity in MRI data.

Authors:  J G Sled; A P Zijdenbos; A C Evans
Journal:  IEEE Trans Med Imaging       Date:  1998-02       Impact factor: 10.048

6.  Development of a quantitative method for analysis of breast density based on three-dimensional breast MRI.

Authors:  Ke Nie; Jeon-Hor Chen; Siwa Chan; Man-Kwun I Chau; Hon J Yu; Shadfar Bahri; Tiffany Tseng; Orhan Nalcioglu; Min-Ying Su
Journal:  Med Phys       Date:  2008-12       Impact factor: 4.071

7.  Multimodality screening of high-risk women: a prospective cohort study.

Authors:  Susan P Weinstein; A Russell Localio; Emily F Conant; Mark Rosen; Kathleen M Thomas; Mitchell D Schnall
Journal:  J Clin Oncol       Date:  2009-11-02       Impact factor: 44.544

8.  A pilot study of compositional analysis of the breast and estimation of breast mammographic density using three-dimensional T1-weighted magnetic resonance imaging.

Authors:  Michael Khazen; Ruth M L Warren; Caroline R M Boggis; Emilie C Bryant; Sadie Reed; Iqbal Warsi; Linda J Pointon; Gek E Kwan-Lim; Deborah Thompson; Ros Eeles; Doug Easton; D Gareth Evans; Martin O Leach
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2008-09       Impact factor: 4.254

9.  Magnetic resonance imaging for secondary assessment of breast density in a high-risk cohort.

Authors:  Catherine Klifa; Julio Carballido-Gamio; Lisa Wilmes; Anne Laprie; John Shepherd; Jessica Gibbs; Bo Fan; Susan Noworolski; Nola Hylton
Journal:  Magn Reson Imaging       Date:  2009-07-23       Impact factor: 2.546

10.  Statistical atlases of bone anatomy: construction, iterative improvement and validation.

Authors:  Gouthami Chintalapani; Lotta M Ellingsen; Ofri Sadowsky; Jerry L Prince; Russell H Taylor
Journal:  Med Image Comput Comput Assist Interv       Date:  2007
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  7 in total

1.  Automated fibroglandular tissue segmentation and volumetric density estimation in breast MRI using an atlas-aided fuzzy C-means method.

Authors:  Shandong Wu; Susan P Weinstein; Emily F Conant; Despina Kontos
Journal:  Med Phys       Date:  2013-12       Impact factor: 4.071

2.  Dose-response effects of aerobic exercise on estrogen among women at high risk for breast cancer: a randomized controlled trial.

Authors:  Kathryn H Schmitz; Nancy I Williams; Despina Kontos; Susan Domchek; Knashawn H Morales; Wei-Ting Hwang; Lorita L Grant; Laura DiGiovanni; Domenick Salvatore; Desire' Fenderson; Mitchell Schnall; Mary Lou Galantino; Jill Stopfer; Mindy S Kurzer; Shandong Wu; Jessica Adelman; Justin C Brown; Jerene Good
Journal:  Breast Cancer Res Treat       Date:  2015-10-28       Impact factor: 4.872

3.  Deformable registration for quantifying longitudinal tumor changes during neoadjuvant chemotherapy.

Authors:  Yangming Ou; Susan P Weinstein; Emily F Conant; Sarah Englander; Xiao Da; Bilwaj Gaonkar; Meng-Kang Hsieh; Mark Rosen; Angela DeMichele; Christos Davatzikos; Despina Kontos
Journal:  Magn Reson Med       Date:  2014-07-15       Impact factor: 4.668

Review 4.  Imaging Breast Density: Established and Emerging Modalities.

Authors:  Jeon-Hor Chen; Gultekin Gulsen; Min-Ying Su
Journal:  Transl Oncol       Date:  2015-12       Impact factor: 4.243

5.  Breast MRI segmentation for density estimation: Do different methods give the same results and how much do differences matter?

Authors:  Simon J Doran; John H Hipwell; Rachel Denholm; Björn Eiben; Marta Busana; David J Hawkes; Martin O Leach; Isabel Dos Santos Silva
Journal:  Med Phys       Date:  2017-07-25       Impact factor: 4.071

6.  Automatic and fast segmentation of breast region-of-interest (ROI) and density in MRIs.

Authors:  Dinesh Pandey; Xiaoxia Yin; Hua Wang; Min-Ying Su; Jeon-Hor Chen; Jianlin Wu; Yanchun Zhang
Journal:  Heliyon       Date:  2018-12-17

7.  MRI Background Parenchymal Enhancement Is Not Associated with Breast Cancer.

Authors:  Barbara Bennani-Baiti; Matthias Dietzel; Pascal Andreas Baltzer
Journal:  PLoS One       Date:  2016-07-05       Impact factor: 3.240

  7 in total

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