Literature DB >> 23286060

Sparse DSI: learning DSI structure for denoising and fast imaging.

Alexandre Gramfort1, Cyril Poupon, Maxime Descoteaux.   

Abstract

Diffusion spectrum imaging (DSI) from multiple diffusion-weighted images (DWI) allows to image the complex geometry of water diffusion in biological tissue. To capture the structure of DSI data, we propose to use sparse coding constrained by physical properties of the signal, namely symmetry and positivity, to learn a dictionary of diffusion profiles. Given this estimated model of the signal, we can extract better estimates of the signal from noisy measurements and also speed up acquisition by reducing the number of acquired DWI while giving access to high resolution DSI data. The method learns jointly for all the acquired DWI and scales to full brain data. Working with two sets of 515 DWI images acquired on two different subjects we show that using just half of the data (258 DWI) we can better predict the other 257 DWI than the classic symmetry procedure. The observation holds even if the diffusion profiles are estimated on a different subject dataset from an undersampled q-space of 40 measurements.

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Year:  2012        PMID: 23286060     DOI: 10.1007/978-3-642-33418-4_36

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  6 in total

1.  A Bayesian approach to distinguishing interdigitated tongue muscles from limited diffusion magnetic resonance imaging.

Authors:  Chuyang Ye; Emi Murano; Maureen Stone; Jerry L Prince
Journal:  Comput Med Imaging Graph       Date:  2015-07-21       Impact factor: 4.790

2.  Diffusion propagator estimation from sparse measurements in a tractography framework.

Authors:  Yogesh Rathi; Borjan Gagoski; Kawin Setsompop; Oleg Michailovich; P Ellen Grant; Carl-Fredrik Westin
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

3.  Multi-shell diffusion signal recovery from sparse measurements.

Authors:  Y Rathi; O Michailovich; F Laun; K Setsompop; P E Grant; C-F Westin
Journal:  Med Image Anal       Date:  2014-07-05       Impact factor: 8.545

4.  Estimation of the CSA-ODF using Bayesian compressed sensing of multi-shell HARDI.

Authors:  Julio M Duarte-Carvajalino; Christophe Lenglet; Junqian Xu; Essa Yacoub; Kamil Ugurbil; Steen Moeller; Lawrence Carin; Guillermo Sapiro
Journal:  Magn Reson Med       Date:  2013-12-12       Impact factor: 4.668

5.  Fast dictionary-based reconstruction for diffusion spectrum imaging.

Authors:  Berkin Bilgic; Itthi Chatnuntawech; Kawin Setsompop; Stephen F Cauley; Anastasia Yendiki; Lawrence L Wald; Elfar Adalsteinsson
Journal:  IEEE Trans Med Imaging       Date:  2013-07-04       Impact factor: 10.048

Review 6.  Rapid brain MRI acquisition techniques at ultra-high fields.

Authors:  Kawin Setsompop; David A Feinberg; Jonathan R Polimeni
Journal:  NMR Biomed       Date:  2016-02-02       Impact factor: 4.044

  6 in total

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