Literature DB >> 23284539

3-[(R)-1-Hy-droxy-butan-2-yl]-1,2,3-benzo-triazin-4(3H)-one.

Fernando Rocha-Alonzo1, David Morales-Morales, Simón Hernández-Ortega, Reyna Reyes-Martínez, Miguel Parra-Hake.   

Abstract

The crystal structure of the title compound, C(11)H(13)N(3)O(2), is stabilized by O-H⋯O hydrogen bonds, which link the mol-ecules into chains along [100].

Entities:  

Year:  2012        PMID: 23284539      PMCID: PMC3515319          DOI: 10.1107/S1600536812043802

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological and synthetic applications of benzo-1,2,3-triazinones, see: Caliendo et al. (1999 ▶); Zheng et al. (2005 ▶); Vaisburg et al. (2004 ▶); Chollet et al. (2002 ▶); Le Diguarher et al. (2003 ▶); Clark et al. (1995 ▶); Carpino et al. (2004 ▶); Janout et al. (2003 ▶); Gierasch et al. (2000 ▶). For structures of benzo-1,2,3-triazinones, see: Hjortås et al. (1973 ▶); Hunt et al. (1983 ▶); Reingruber et al. (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶). For the synthesis, see: Gómez et al. (2005 ▶).

Experimental

Crystal data

C11H13N3O2 M = 219.24 Orthorhombic, a = 8.9668 (13) Å b = 10.1506 (15) Å c = 12.0238 (17) Å V = 1094.4 (3) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.32 × 0.10 × 0.10 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer 9057 measured reflections 2000 independent reflections 1700 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.076 S = 0.93 2000 reflections 149 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.11 e Å−3 Δρmin = −0.15 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812043802/zj2097sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812043802/zj2097Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812043802/zj2097Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H13N3O2F(000) = 464
Mr = 219.24Dx = 1.331 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 4276 reflections
a = 8.9668 (13) Åθ = 2.6–25.2°
b = 10.1506 (15) ŵ = 0.09 mm1
c = 12.0238 (17) ÅT = 298 K
V = 1094.4 (3) Å3Prism, colourless
Z = 40.32 × 0.10 × 0.10 mm
Bruker SMART APEX CCD area-detector diffractometer1700 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.044
Graphite monochromatorθmax = 25.4°, θmin = 2.6°
Detector resolution: 0.83 pixels mm-1h = −10→10
ω scansk = −12→12
9057 measured reflectionsl = −14→14
2000 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.076H atoms treated by a mixture of independent and constrained refinement
S = 0.93w = 1/[σ2(Fo2) + (0.0412P)2] where P = (Fo2 + 2Fc2)/3
2000 reflections(Δ/σ)max < 0.001
149 parametersΔρmax = 0.11 e Å3
1 restraintΔρmin = −0.15 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.56004 (14)0.68985 (11)1.02583 (10)0.0584 (4)
N10.87770 (16)0.64809 (13)0.79106 (11)0.0438 (4)
O20.82337 (18)0.99854 (13)0.99816 (15)0.0797 (5)
H20.885 (2)0.9362 (16)0.992 (2)0.096*
N20.80536 (16)0.75426 (13)0.80106 (11)0.0430 (4)
N30.70312 (14)0.76906 (12)0.88520 (11)0.0372 (3)
C40.66320 (18)0.67321 (15)0.96026 (14)0.0386 (4)
C4A0.75154 (18)0.55429 (16)0.95179 (13)0.0362 (4)
C50.7338 (2)0.44941 (16)1.02537 (14)0.0469 (4)
H50.66420.45461.08260.056*
C60.8194 (2)0.33848 (17)1.01301 (16)0.0545 (5)
H60.80810.26861.06230.065*
C70.9226 (2)0.32979 (18)0.92741 (17)0.0568 (5)
H70.97900.25350.91910.068*
C80.94229 (19)0.43244 (17)0.85511 (16)0.0517 (5)
H81.01270.42660.79850.062*
C8A0.85625 (17)0.54564 (15)0.86684 (13)0.0382 (4)
C90.62783 (18)0.89954 (14)0.88408 (15)0.0420 (4)
H90.55940.90210.94760.050*
C100.7406 (2)1.00892 (17)0.89991 (17)0.0553 (5)
H10A0.80881.00880.83720.066*
H10B0.68861.09270.89980.066*
C110.5352 (2)0.91729 (17)0.77929 (16)0.0559 (5)
H11A0.48381.00120.78330.067*
H11B0.60150.92020.71560.067*
C120.4222 (2)0.80997 (19)0.76146 (19)0.0765 (7)
H12A0.35400.80810.82300.092*
H12B0.47220.72660.75600.092*
H12C0.36810.82660.69400.092*
U11U22U33U12U13U23
O10.0643 (8)0.0449 (7)0.0660 (9)0.0042 (7)0.0294 (8)0.0035 (6)
N10.0471 (8)0.0409 (8)0.0434 (8)0.0020 (7)0.0101 (7)−0.0012 (7)
O20.0754 (11)0.0612 (10)0.1026 (12)0.0097 (8)−0.0365 (10)−0.0201 (9)
N20.0473 (8)0.0401 (8)0.0415 (8)0.0014 (7)0.0075 (7)0.0013 (7)
N30.0410 (8)0.0319 (7)0.0387 (8)0.0029 (6)0.0047 (7)0.0002 (6)
C40.0396 (9)0.0364 (9)0.0398 (9)−0.0021 (8)0.0043 (8)−0.0018 (8)
C4A0.0380 (9)0.0339 (8)0.0366 (9)−0.0030 (7)−0.0024 (8)−0.0013 (7)
C50.0532 (11)0.0426 (10)0.0448 (10)−0.0046 (9)−0.0004 (9)0.0019 (8)
C60.0638 (12)0.0392 (10)0.0604 (12)−0.0009 (9)−0.0109 (10)0.0083 (9)
C70.0538 (12)0.0365 (10)0.0800 (14)0.0100 (9)−0.0071 (11)−0.0013 (10)
C80.0435 (10)0.0465 (11)0.0651 (12)0.0061 (9)0.0060 (9)−0.0089 (10)
C8A0.0379 (9)0.0352 (9)0.0416 (10)−0.0030 (7)−0.0017 (8)−0.0044 (8)
C90.0457 (9)0.0337 (9)0.0467 (10)0.0058 (7)0.0009 (9)−0.0019 (8)
C100.0587 (11)0.0362 (10)0.0711 (12)0.0034 (8)−0.0022 (12)−0.0055 (9)
C110.0648 (12)0.0429 (10)0.0600 (12)0.0132 (9)−0.0118 (10)−0.0007 (9)
C120.0765 (14)0.0602 (13)0.0927 (17)0.0111 (12)−0.0357 (14)−0.0133 (12)
O1—C41.2271 (18)C7—C81.368 (2)
N1—N21.2636 (17)C7—H70.9300
N1—C8A1.396 (2)C8—C8A1.391 (2)
O2—C101.399 (2)C8—H80.9300
O2—H20.846 (9)C9—C101.514 (2)
N2—N31.3735 (18)C9—C111.520 (2)
N3—C41.3745 (19)C9—H90.9800
N3—C91.4866 (19)C10—H10A0.9700
C4—C4A1.447 (2)C10—H10B0.9700
C4A—C8A1.390 (2)C11—C121.503 (2)
C4A—C51.393 (2)C11—H11A0.9700
C5—C61.371 (2)C11—H11B0.9700
C5—H50.9300C12—H12A0.9600
C6—C71.387 (3)C12—H12B0.9600
C6—H60.9300C12—H12C0.9600
N2—N1—C8A120.17 (13)C8—C8A—N1118.22 (15)
C10—O2—H2109.5 (17)N3—C9—C10110.42 (13)
N1—N2—N3120.40 (12)N3—C9—C11111.17 (14)
N2—N3—C4125.45 (12)C10—C9—C11112.49 (14)
N2—N3—C9113.20 (12)N3—C9—H9107.5
C4—N3—C9121.22 (13)C10—C9—H9107.5
O1—C4—N3121.38 (14)C11—C9—H9107.5
O1—C4—C4A124.93 (15)O2—C10—C9113.91 (15)
N3—C4—C4A113.68 (14)O2—C10—H10A108.8
C8A—C4A—C5119.70 (15)C9—C10—H10A108.8
C8A—C4A—C4118.29 (14)O2—C10—H10B108.8
C5—C4A—C4122.01 (15)C9—C10—H10B108.8
C6—C5—C4A119.66 (17)H10A—C10—H10B107.7
C6—C5—H5120.2C12—C11—C9113.63 (15)
C4A—C5—H5120.2C12—C11—H11A108.8
C5—C6—C7120.42 (17)C9—C11—H11A108.8
C5—C6—H6119.8C12—C11—H11B108.8
C7—C6—H6119.8C9—C11—H11B108.8
C8—C7—C6120.59 (17)H11A—C11—H11B107.7
C8—C7—H7119.7C11—C12—H12A109.5
C6—C7—H7119.7C11—C12—H12B109.5
C7—C8—C8A119.55 (17)H12A—C12—H12B109.5
C7—C8—H8120.2C11—C12—H12C109.5
C8A—C8—H8120.2H12A—C12—H12C109.5
C4A—C8A—C8120.07 (15)H12B—C12—H12C109.5
C4A—C8A—N1121.71 (14)
D—H···AD—HH···AD···AD—H···A
O2—H2···O1i0.85 (1)2.03 (1)2.8712 (19)171 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2⋯O1i 0.85 (1)2.03 (1)2.8712 (19)171 (2)

Symmetry code: (i) .

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