Literature DB >> 23284531

N-{(1Z)-1-[(6-Chloro-pyridin-3-ylmeth-yl)(eth-yl)amino]-3-(3-chloro-phen-yl)-2-nitro-5-oxohex-1-en-yl}-N-methyl-acetamide.

Chuan-Wen Sun1, Ying Wu, Jing Wang.   

Abstract

In the title compound, C(23)H(26)Cl(2)N(4)O(4),the dihedral angle between the mean planes of the pyridine and 3-chloro-phenyl rings is 22.63 (2)°. The nitro group is in a Z conformation.

Entities:  

Year:  2012        PMID: 23284531      PMCID: PMC3515311          DOI: 10.1107/S1600536812043358

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to neonicotinoid compounds and their application as insecticides, see: Tomizawa & Casida, (2000 ▶); Minamida et al. (1993 ▶); Kashiwada et al. (1996 ▶). For the synthesis, see: Zhang et al. (2010 ▶).

Experimental

Crystal data

C23H26Cl2N4O4 M = 493.38 Triclinic, a = 7.7948 (13) Å b = 12.649 (2) Å c = 13.021 (2) Å α = 91.364 (3)° β = 98.765 (2)° γ = 107.878 (3)° V = 1204.1 (3) Å3 Z = 2 Mo Kα radiation μ = 0.31 mm−1 T = 298 K 0.16 × 0.12 × 0.10 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.943, T max = 0.970 7096 measured reflections 4200 independent reflections 3870 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.064 wR(F 2) = 0.148 S = 1.17 4200 reflections 302 parameters H-atom parameters constrained Δρmax = 0.47 e Å−3 Δρmin = −0.38 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812043358/jj2153sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812043358/jj2153Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812043358/jj2153Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C23H26Cl2N4O4Z = 2
Mr = 493.38F(000) = 516
Triclinic, P1Dx = 1.361 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.7948 (13) ÅCell parameters from 4525 reflections
b = 12.649 (2) Åθ = 2.2–28.3°
c = 13.021 (2) ŵ = 0.31 mm1
α = 91.364 (3)°T = 298 K
β = 98.765 (2)°Block, yellow
γ = 107.878 (3)°0.16 × 0.12 × 0.10 mm
V = 1204.1 (3) Å3
Bruker SMART APEX CCD area-detector diffractometer4200 independent reflections
Radiation source: fine-focus sealed tube3870 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
phi and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→9
Tmin = 0.943, Tmax = 0.970k = −15→13
7096 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.064Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.148H-atom parameters constrained
S = 1.17w = 1/[σ2(Fo2) + (0.0453P)2 + 0.9109P] where P = (Fo2 + 2Fc2)/3
4200 reflections(Δ/σ)max = 0.011
302 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.38 e Å3
Experimental. 1H NMR (CDCl3, 400 Hz): 8.47 (d, J = 1.9 Hz,1H, Py—H), 7.83 (dd, J = 8.2, 2.4 Hz, 1H, Py—H), 7.42 (d, J = 8.2 Hz, 1H, Py—H), 7.12 (d, J = 10.2 Hz, 1H, Ph—H), 7.01–6.91 (m, 3H, Ph—H), 4.27 (d, J = 14.7 Hz, 1H), 4.12 (d, J = 7.7 Hz, 1H), 4.00 (dd, J = 10.8, 3.8 Hz, 1H), 3.78 (d, J = 14.8 Hz, 1H), 3.31 (s, 3H, NCH3), 3.09 (dd, J = 14.4, 7.2 Hz, 1H, NCH2), 2.89 (d, J = 3.9Hz, 1H, NCH2), 2.26 (s, 1H), 2.13 (s, 3H), 1.67 (s, 3H), 1.17 (t, J = 7.2 Hz, 3H, NCH2CH3). IR(KBr, cm-1) 2945 (CH3), 1710 (C=O), 1658 (C=C), 1378, 1390(NO2), 1660, 1621, 1538(benzene).
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.9628 (4)0.8187 (2)0.8649 (3)0.0521 (7)
C20.9304 (4)0.8215 (3)0.7596 (2)0.0559 (8)
H21.00300.87790.72590.067*
C30.7857 (4)0.7376 (3)0.7052 (2)0.0540 (8)
H30.75810.73670.63310.065*
C40.6813 (4)0.6546 (2)0.7573 (2)0.0427 (6)
C50.7293 (4)0.6599 (3)0.8637 (2)0.0596 (8)
H50.66130.60360.89950.071*
C60.5256 (4)0.5591 (2)0.6992 (2)0.0451 (6)
H6A0.52050.56650.62490.054*
H6B0.54920.48960.71420.054*
C70.3021 (4)0.6592 (2)0.7287 (2)0.0480 (7)
H7A0.40570.71800.76640.058*
H7B0.19980.65010.76550.058*
C80.2535 (6)0.6925 (3)0.6212 (3)0.0785 (11)
H8A0.35400.70110.58430.118*
H8B0.22770.76180.62580.118*
H8C0.14750.63600.58460.118*
C90.2212 (3)0.4559 (2)0.73211 (18)0.0348 (5)
C100.1460 (5)0.4994 (3)0.9036 (2)0.0550 (8)
H10A0.09620.55790.91750.083*
H10B0.27710.52770.91880.083*
H10C0.10290.43950.94650.083*
C11−0.0970 (4)0.4176 (3)0.7564 (2)0.0519 (7)
C12−0.1607 (4)0.3915 (3)0.6418 (3)0.0650 (9)
H12A−0.22900.31380.62830.098*
H12B−0.05690.40850.60660.098*
H12C−0.23730.43530.61690.098*
C130.2214 (3)0.3532 (2)0.69263 (19)0.0368 (6)
C140.1557 (4)0.2493 (2)0.7497 (2)0.0421 (6)
H140.11530.27520.81050.051*
C150.3084 (4)0.2029 (2)0.7966 (2)0.0542 (7)
H15A0.25320.12850.81710.065*
H15B0.38010.19690.74330.065*
C160.4344 (4)0.2730 (2)0.8897 (2)0.0500 (7)
C170.5633 (6)0.2214 (3)0.9493 (3)0.0795 (11)
H17A0.66640.27890.98730.119*
H17B0.60460.17920.90190.119*
H17C0.50190.17310.99720.119*
C18−0.0129 (4)0.1572 (2)0.6946 (2)0.0454 (6)
C19−0.0443 (5)0.1205 (3)0.5905 (3)0.0766 (11)
H190.04050.15350.54830.092*
C20−0.2016 (6)0.0346 (4)0.5483 (3)0.0891 (13)
H20−0.22010.01060.47820.107*
C21−0.3293 (5)−0.0151 (3)0.6078 (3)0.0746 (11)
H21−0.4345−0.07240.57930.090*
C22−0.2985 (5)0.0214 (3)0.7100 (3)0.0661 (9)
C23−0.1431 (4)0.1059 (2)0.7539 (3)0.0581 (8)
H23−0.12580.12860.82420.070*
Cl11.14377 (13)0.92531 (8)0.93748 (8)0.0793 (3)
Cl2−0.45945 (18)−0.04123 (10)0.78826 (12)0.1249 (6)
N10.8686 (4)0.7416 (2)0.9194 (2)0.0676 (8)
N20.3480 (3)0.55437 (17)0.72679 (16)0.0377 (5)
N30.0879 (3)0.45855 (18)0.79346 (17)0.0416 (5)
N40.2894 (3)0.34678 (19)0.59894 (18)0.0459 (6)
O1−0.2039 (3)0.4098 (2)0.8168 (2)0.0819 (8)
O20.2890 (3)0.41880 (18)0.53559 (15)0.0616 (6)
O30.3403 (3)0.26542 (19)0.57805 (18)0.0650 (6)
O40.4321 (3)0.36466 (18)0.91429 (17)0.0595 (6)
U11U22U33U12U13U23
C10.0429 (16)0.0456 (16)0.0630 (19)0.0094 (13)0.0035 (14)0.0074 (14)
C20.0512 (17)0.0492 (17)0.0596 (19)0.0001 (14)0.0176 (15)0.0138 (14)
C30.0560 (18)0.0566 (18)0.0424 (16)0.0040 (14)0.0158 (14)0.0045 (13)
C40.0409 (14)0.0416 (14)0.0454 (15)0.0103 (12)0.0126 (12)0.0029 (12)
C50.0566 (19)0.0544 (18)0.0537 (19)−0.0035 (15)0.0088 (15)0.0142 (14)
C60.0449 (15)0.0438 (15)0.0470 (16)0.0104 (12)0.0166 (12)−0.0009 (12)
C70.0543 (17)0.0365 (14)0.0537 (17)0.0151 (13)0.0096 (13)0.0014 (12)
C80.104 (3)0.062 (2)0.072 (2)0.034 (2)0.004 (2)0.0170 (18)
C90.0377 (13)0.0398 (13)0.0273 (12)0.0119 (11)0.0069 (10)0.0048 (10)
C100.0659 (19)0.0668 (19)0.0377 (15)0.0243 (16)0.0184 (14)−0.0012 (13)
C110.0449 (16)0.0550 (17)0.0609 (19)0.0194 (14)0.0162 (14)0.0080 (14)
C120.0472 (18)0.080 (2)0.066 (2)0.0234 (17)−0.0005 (15)−0.0007 (18)
C130.0363 (13)0.0391 (14)0.0337 (13)0.0075 (11)0.0109 (10)0.0009 (10)
C140.0458 (15)0.0363 (14)0.0398 (14)0.0068 (11)0.0067 (12)0.0007 (11)
C150.0574 (18)0.0411 (15)0.0588 (18)0.0132 (13)−0.0013 (15)0.0030 (13)
C160.0471 (16)0.0479 (17)0.0512 (17)0.0095 (13)0.0079 (13)0.0063 (13)
C170.084 (3)0.064 (2)0.079 (3)0.0224 (19)−0.022 (2)0.0009 (18)
C180.0453 (15)0.0348 (14)0.0536 (17)0.0101 (12)0.0059 (13)0.0043 (12)
C190.072 (2)0.080 (2)0.052 (2)−0.0111 (19)0.0038 (17)0.0028 (17)
C200.086 (3)0.089 (3)0.057 (2)−0.010 (2)−0.013 (2)−0.005 (2)
C210.055 (2)0.053 (2)0.094 (3)−0.0023 (16)−0.0104 (19)0.0010 (19)
C220.0543 (19)0.0384 (16)0.098 (3)0.0009 (14)0.0198 (18)−0.0028 (17)
C230.0622 (19)0.0373 (15)0.069 (2)0.0038 (14)0.0196 (16)−0.0040 (14)
Cl10.0610 (5)0.0625 (5)0.0888 (7)−0.0048 (4)−0.0140 (5)0.0050 (5)
Cl20.1075 (9)0.0734 (7)0.1642 (13)−0.0375 (6)0.0766 (9)−0.0304 (7)
N10.0650 (18)0.0645 (17)0.0553 (16)−0.0018 (14)0.0001 (13)0.0126 (13)
N20.0418 (12)0.0355 (11)0.0369 (11)0.0115 (9)0.0115 (9)0.0027 (9)
N30.0413 (12)0.0477 (13)0.0389 (12)0.0151 (10)0.0144 (10)0.0016 (10)
N40.0456 (13)0.0450 (13)0.0420 (13)0.0053 (10)0.0122 (10)−0.0092 (11)
O10.0523 (14)0.118 (2)0.0845 (18)0.0287 (14)0.0336 (13)0.0132 (16)
O20.0865 (16)0.0549 (13)0.0370 (11)0.0071 (11)0.0221 (11)0.0050 (10)
O30.0679 (14)0.0622 (14)0.0711 (15)0.0237 (11)0.0270 (12)−0.0149 (11)
O40.0589 (13)0.0600 (14)0.0574 (13)0.0196 (11)0.0041 (10)−0.0119 (10)
C1—N11.321 (4)C11—C121.494 (4)
C1—C21.359 (4)C12—H12A0.9600
C1—Cl11.751 (3)C12—H12B0.9600
C2—C31.373 (4)C12—H12C0.9600
C2—H20.9300C13—N41.412 (3)
C3—C41.379 (4)C13—C141.513 (4)
C3—H30.9300C14—C181.527 (4)
C4—C51.374 (4)C14—C151.536 (4)
C4—C61.510 (4)C14—H140.9800
C5—N11.344 (4)C15—C161.508 (4)
C5—H50.9300C15—H15A0.9700
C6—N21.466 (3)C15—H15B0.9700
C6—H6A0.9700C16—O41.202 (3)
C6—H6B0.9700C16—C171.492 (5)
C7—N21.476 (3)C17—H17A0.9600
C7—C81.498 (4)C17—H17B0.9600
C7—H7A0.9700C17—H17C0.9600
C7—H7B0.9700C18—C231.380 (4)
C8—H8A0.9600C18—C191.383 (4)
C8—H8B0.9600C19—C201.391 (5)
C8—H8C0.9600C19—H190.9300
C9—N21.343 (3)C20—C211.364 (6)
C9—C131.387 (3)C20—H200.9300
C9—N31.412 (3)C21—C221.359 (5)
C10—N31.467 (3)C21—H210.9300
C10—H10A0.9600C22—C231.378 (4)
C10—H10B0.9600C22—Cl21.749 (4)
C10—H10C0.9600C23—H230.9300
C11—O11.215 (4)N4—O21.244 (3)
C11—N31.377 (4)N4—O31.249 (3)
N1—C1—C2125.7 (3)C9—C13—C14121.2 (2)
N1—C1—Cl1115.7 (2)N4—C13—C14119.8 (2)
C2—C1—Cl1118.6 (2)C13—C14—C18117.0 (2)
C1—C2—C3117.1 (3)C13—C14—C15114.0 (2)
C1—C2—H2121.4C18—C14—C15111.8 (2)
C3—C2—H2121.4C13—C14—H14104.1
C2—C3—C4120.2 (3)C18—C14—H14104.1
C2—C3—H3119.9C15—C14—H14104.1
C4—C3—H3119.9C16—C15—C14113.8 (2)
C5—C4—C3117.3 (3)C16—C15—H15A108.8
C5—C4—C6121.4 (2)C14—C15—H15A108.8
C3—C4—C6121.3 (3)C16—C15—H15B108.8
N1—C5—C4124.1 (3)C14—C15—H15B108.8
N1—C5—H5118.0H15A—C15—H15B107.7
C4—C5—H5118.0O4—C16—C17122.0 (3)
N2—C6—C4112.9 (2)O4—C16—C15122.3 (3)
N2—C6—H6A109.0C17—C16—C15115.7 (3)
C4—C6—H6A109.0C16—C17—H17A109.5
N2—C6—H6B109.0C16—C17—H17B109.5
C4—C6—H6B109.0H17A—C17—H17B109.5
H6A—C6—H6B107.8C16—C17—H17C109.5
N2—C7—C8112.1 (2)H17A—C17—H17C109.5
N2—C7—H7A109.2H17B—C17—H17C109.5
C8—C7—H7A109.2C23—C18—C19117.6 (3)
N2—C7—H7B109.2C23—C18—C14117.3 (3)
C8—C7—H7B109.2C19—C18—C14125.2 (3)
H7A—C7—H7B107.9C18—C19—C20120.6 (3)
C7—C8—H8A109.5C18—C19—H19119.7
C7—C8—H8B109.5C20—C19—H19119.7
H8A—C8—H8B109.5C21—C20—C19121.2 (4)
C7—C8—H8C109.5C21—C20—H20119.4
H8A—C8—H8C109.5C19—C20—H20119.4
H8B—C8—H8C109.5C22—C21—C20118.1 (3)
N2—C9—C13126.1 (2)C22—C21—H21120.9
N2—C9—N3115.3 (2)C20—C21—H21120.9
C13—C9—N3118.3 (2)C21—C22—C23121.8 (3)
N3—C10—H10A109.5C21—C22—Cl2119.1 (3)
N3—C10—H10B109.5C23—C22—Cl2119.1 (3)
H10A—C10—H10B109.5C22—C23—C18120.7 (3)
N3—C10—H10C109.5C22—C23—H23119.6
H10A—C10—H10C109.5C18—C23—H23119.6
H10B—C10—H10C109.5C1—N1—C5115.6 (3)
O1—C11—N3119.2 (3)C9—N2—C6120.5 (2)
O1—C11—C12121.7 (3)C9—N2—C7121.1 (2)
N3—C11—C12119.0 (3)C6—N2—C7117.4 (2)
C11—C12—H12A109.5C11—N3—C9122.8 (2)
C11—C12—H12B109.5C11—N3—C10117.8 (2)
H12A—C12—H12B109.5C9—N3—C10119.3 (2)
C11—C12—H12C109.5O2—N4—O3120.6 (2)
H12A—C12—H12C109.5O2—N4—C13119.8 (2)
H12B—C12—H12C109.5O3—N4—C13119.5 (2)
C9—C13—N4118.9 (2)
N1—C1—C2—C30.7 (5)C20—C21—C22—C23−0.3 (6)
Cl1—C1—C2—C3−179.0 (2)C20—C21—C22—Cl2−179.7 (3)
C1—C2—C3—C4−0.6 (5)C21—C22—C23—C180.5 (5)
C2—C3—C4—C5−0.4 (5)Cl2—C22—C23—C18179.9 (3)
C2—C3—C4—C6−177.9 (3)C19—C18—C23—C22−0.2 (5)
C3—C4—C5—N11.3 (5)C14—C18—C23—C22−179.5 (3)
C6—C4—C5—N1178.7 (3)C2—C1—N1—C50.1 (5)
C5—C4—C6—N264.1 (4)Cl1—C1—N1—C5179.8 (3)
C3—C4—C6—N2−118.5 (3)C4—C5—N1—C1−1.1 (5)
N2—C9—C13—N4−35.2 (4)C13—C9—N2—C6−14.8 (4)
N3—C9—C13—N4152.1 (2)N3—C9—N2—C6158.1 (2)
N2—C9—C13—C14143.0 (3)C13—C9—N2—C7153.5 (3)
N3—C9—C13—C14−29.7 (4)N3—C9—N2—C7−33.6 (3)
C9—C13—C14—C18116.5 (3)C4—C6—N2—C9−143.8 (2)
N4—C13—C14—C18−65.4 (3)C4—C6—N2—C747.4 (3)
C9—C13—C14—C15−110.5 (3)C8—C7—N2—C9−94.4 (3)
N4—C13—C14—C1567.7 (3)C8—C7—N2—C674.3 (3)
C13—C14—C15—C1671.6 (3)O1—C11—N3—C9170.8 (3)
C18—C14—C15—C16−152.9 (3)C12—C11—N3—C9−13.3 (4)
C14—C15—C16—O4−10.8 (4)O1—C11—N3—C10−4.9 (4)
C14—C15—C16—C17169.4 (3)C12—C11—N3—C10170.9 (3)
C13—C14—C18—C23−137.1 (3)N2—C9—N3—C11126.2 (3)
C15—C14—C18—C2388.9 (3)C13—C9—N3—C11−60.3 (3)
C13—C14—C18—C1943.7 (4)N2—C9—N3—C10−58.1 (3)
C15—C14—C18—C19−90.4 (4)C13—C9—N3—C10115.4 (3)
C23—C18—C19—C20−0.3 (6)C9—C13—N4—O2−24.5 (4)
C14—C18—C19—C20179.0 (3)C14—C13—N4—O2157.2 (2)
C18—C19—C20—C210.4 (7)C9—C13—N4—O3159.3 (2)
C19—C20—C21—C22−0.2 (7)C14—C13—N4—O3−18.9 (4)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Design, multicomponent synthesis, and bioactivities of novel neonicotinoid analogues with 1,4-dihydropyridine scaffold.

Authors:  Wenwen Zhang; Xiaobao Yang; Weidong Chen; Xiaoyong Xu; Lu Li; Hongbin Zhai; Zhong Li
Journal:  J Agric Food Chem       Date:  2010-03-10       Impact factor: 5.279

3.  Imidacloprid, thiacloprid, and their imine derivatives up-regulate the alpha 4 beta 2 nicotinic acetylcholine receptor in M10 cells.

Authors:  M Tomizawa; J E Casida
Journal:  Toxicol Appl Pharmacol       Date:  2000-11-15       Impact factor: 4.219

  3 in total

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