Literature DB >> 23284416

2-Methyl-3-(4-methyl-phen-yl)-5,6-diphenyl-2,3-dihydro-pyrazine.

A Thiruvalluvar1, N Anuradha, S Chitra, D Devanathan, R J Butcher.   

Abstract

In the title mol-ecule, C(24)H(22)N(2), four atoms (N-C-C-N) of the heterocyclic ring, with their attached H atoms, and all atoms of the methyl group, are disordered over two positions; the site-occupancy factor of the major component is 0.713 (6). The major disorder component of the heterocyclic ring adopts a half-chair conformation, with all substituents equatorial. The benzene ring adjacent to the methyl group forms dihedral angles of 79.68 (11) and 80.92 (11)° with the phenyl rings; the dihedral angle between adjacent phenyl rings is 59.10 (11)°. The crystal structure features three C-H⋯π inter-actions.

Entities:  

Year:  2012        PMID: 23284416      PMCID: PMC3515189          DOI: 10.1107/S1600536812041438

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of dihydro­pyrazines and for closely related crystal structures, see: Anuradha et al. (2009 ▶, 2011 ▶).

Experimental

Crystal data

C24H22N2 M = 338.44 Monoclinic, a = 8.1986 (5) Å b = 11.8211 (6) Å c = 19.6686 (7) Å β = 93.638 (4)° V = 1902.38 (17) Å3 Z = 4 Cu Kα radiation μ = 0.53 mm−1 T = 123 K 0.39 × 0.21 × 0.17 mm

Data collection

Agilent Xcalibur Ruby Gemini diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.830, T max = 1.000 12585 measured reflections 3892 independent reflections 3044 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.214 S = 1.07 3892 reflections 254 parameters 68 restraints H-atom parameters constrained Δρmax = 0.71 e Å−3 Δρmin = −0.35 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812041438/hg5255sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812041438/hg5255Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812041438/hg5255Isup3.cdx Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812041438/hg5255Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H22N2F(000) = 720
Mr = 338.44Dx = 1.182 Mg m3
Monoclinic, P21/cMelting point: 450 K
Hall symbol: -P 2ybcCu Kα radiation, λ = 1.54184 Å
a = 8.1986 (5) ÅCell parameters from 3179 reflections
b = 11.8211 (6) Åθ = 3.7–75.3°
c = 19.6686 (7) ŵ = 0.53 mm1
β = 93.638 (4)°T = 123 K
V = 1902.38 (17) Å3Prism, colourless
Z = 40.39 × 0.21 × 0.17 mm
Agilent Xcalibur Ruby Gemini diffractometer3892 independent reflections
Radiation source: Enhance (Cu) X-ray Source3044 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
Detector resolution: 10.5081 pixels mm-1θmax = 75.5°, θmin = 4.4°
ω scansh = −10→9
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −13→14
Tmin = 0.830, Tmax = 1.000l = −24→21
12585 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.214H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.1119P)2 + 0.6381P] where P = (Fo2 + 2Fc2)/3
3892 reflections(Δ/σ)max = 0.001
254 parametersΔρmax = 0.71 e Å3
68 restraintsΔρmin = −0.35 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
N1A0.2620 (9)0.8818 (4)0.1306 (3)0.0675 (11)0.713 (6)
N2A0.2421 (13)0.9429 (5)−0.0086 (3)0.0781 (11)0.713 (6)
C10.2458 (3)0.80641 (19)0.08145 (10)0.0556 (7)
C20.2522 (3)0.8383 (2)0.00937 (11)0.0604 (7)
C3A0.2008 (6)1.0239 (3)0.04467 (17)0.0605 (12)0.713 (6)
C4A0.2286 (11)1.1422 (5)0.0181 (4)0.0792 (15)0.713 (6)
C5A0.3136 (7)0.9952 (4)0.1078 (2)0.0682 (15)0.713 (6)
C60.2095 (3)0.68882 (18)0.10250 (10)0.0518 (6)
C70.2969 (3)0.64263 (19)0.15892 (11)0.0548 (6)
C80.2641 (3)0.53339 (19)0.18009 (12)0.0584 (7)
C90.1433 (3)0.47028 (19)0.14630 (11)0.0590 (7)
C100.0534 (3)0.5165 (2)0.09150 (11)0.0590 (7)
C110.0877 (3)0.62512 (19)0.06909 (10)0.0553 (7)
C120.2806 (3)0.75362 (19)−0.04483 (11)0.0566 (7)
C130.3907 (3)0.6650 (2)−0.03313 (11)0.0601 (7)
C140.4185 (3)0.5879 (2)−0.08442 (13)0.0666 (8)
C150.3345 (3)0.5981 (2)−0.14751 (12)0.0664 (8)
C160.2262 (3)0.6859 (2)−0.16006 (12)0.0649 (8)
C170.1998 (3)0.7640 (2)−0.10907 (11)0.0617 (7)
C180.2782 (4)1.0771 (2)0.16632 (11)0.0667 (8)
C190.3912 (3)1.16373 (19)0.17894 (12)0.0636 (8)
C200.3719 (3)1.24072 (18)0.23056 (11)0.0562 (7)
C210.2402 (3)1.23338 (19)0.27160 (10)0.0548 (7)
C220.1289 (3)1.1477 (2)0.25858 (12)0.0644 (8)
C230.1480 (3)1.0702 (2)0.20701 (12)0.0685 (8)
C240.2223 (4)1.3153 (2)0.32921 (13)0.0775 (10)
N1B0.291 (3)0.8782 (12)0.1267 (9)0.0675 (11)0.287 (6)
N2B0.220 (4)0.9433 (14)−0.0092 (8)0.0781 (11)0.287 (6)
C3B0.2792 (15)1.0317 (8)0.0396 (4)0.0605 (12)0.287 (6)
C4B0.195 (3)1.1406 (13)0.0178 (12)0.0792 (15)0.287 (6)
C5B0.2419 (19)0.9953 (10)0.1111 (5)0.0682 (15)0.287 (6)
H7A0.379170.686050.182980.0657*
H8A0.325330.502000.218140.0701*
H1A0.083861.014440.055270.0724*0.713 (6)
H2A0.159541.15427−0.023810.1186*0.713 (6)
H3A0.200591.197720.052420.1186*0.713 (6)
H4A0.343711.150990.008390.1186*0.713 (6)
H5A0.431480.996420.097510.0819*0.713 (6)
H15A0.351690.54430−0.182240.0797*
H16A0.169540.69305−0.203510.0778*
H17A0.126140.82504−0.118080.0740*
H19A0.482501.169900.151740.0763*
H20A0.449731.299630.238190.0675*
H22A0.037081.141760.285520.0772*
H23A0.070141.011300.199560.0822*
H24A0.106141.324980.336880.1160*
H24B0.279681.285810.370710.1160*
H24C0.269281.388480.317570.1160*
H9A0.122040.395270.160640.0708*
H10A−0.032360.474040.068970.0708*
H11A0.027150.655670.030600.0663*
H13A0.447290.657240.010280.0720*
H14A0.495010.52833−0.076260.0798*
H6B0.399991.040780.037280.0724*0.287 (6)
H7B0.127571.12787−0.024370.1186*0.287 (6)
H8B0.125891.166040.053650.1186*0.287 (6)
H9B0.277511.198460.010090.1186*0.287 (6)
H10B0.119820.991210.108420.0819*0.287 (6)
U11U22U33U12U13U23
N1A0.109 (3)0.0531 (11)0.0414 (12)−0.0068 (14)0.0131 (15)0.0041 (9)
N2A0.130 (3)0.0623 (12)0.0421 (10)0.0090 (15)0.0068 (13)0.0061 (9)
C10.0714 (13)0.0551 (11)0.0412 (10)0.0034 (10)0.0114 (9)0.0037 (8)
C20.0792 (14)0.0596 (12)0.0427 (10)0.0019 (11)0.0074 (10)0.0046 (9)
C3A0.079 (3)0.0616 (15)0.0408 (12)−0.006 (2)0.0041 (17)0.0034 (11)
C4A0.107 (4)0.0719 (16)0.0580 (14)0.006 (2)0.001 (2)0.0083 (12)
C5A0.109 (4)0.0531 (13)0.0435 (13)0.002 (2)0.012 (2)0.0063 (10)
C60.0628 (12)0.0521 (11)0.0420 (10)0.0023 (9)0.0151 (8)0.0009 (8)
C70.0601 (11)0.0573 (12)0.0477 (10)−0.0011 (10)0.0090 (9)0.0031 (9)
C80.0653 (13)0.0580 (12)0.0532 (12)0.0075 (10)0.0149 (10)0.0097 (10)
C90.0693 (13)0.0523 (11)0.0581 (12)−0.0006 (10)0.0247 (10)0.0006 (9)
C100.0647 (12)0.0634 (13)0.0508 (11)−0.0094 (10)0.0192 (10)−0.0084 (10)
C110.0634 (12)0.0632 (12)0.0403 (10)0.0030 (10)0.0112 (9)−0.0014 (9)
C120.0698 (13)0.0591 (12)0.0424 (10)−0.0054 (10)0.0150 (9)0.0026 (9)
C130.0699 (13)0.0636 (13)0.0483 (11)−0.0033 (11)0.0167 (10)0.0029 (10)
C140.0758 (14)0.0649 (14)0.0622 (13)−0.0046 (12)0.0299 (11)−0.0002 (11)
C150.0770 (14)0.0694 (14)0.0561 (13)−0.0192 (12)0.0293 (11)−0.0120 (10)
C160.0688 (13)0.0823 (16)0.0451 (11)−0.0186 (12)0.0166 (10)−0.0057 (10)
C170.0686 (13)0.0726 (14)0.0451 (11)−0.0058 (11)0.0132 (10)0.0018 (10)
C180.111 (2)0.0513 (12)0.0378 (10)−0.0028 (12)0.0060 (11)0.0081 (9)
C190.0850 (15)0.0542 (12)0.0542 (12)0.0065 (11)0.0249 (11)0.0092 (9)
C200.0645 (12)0.0511 (11)0.0539 (11)0.0012 (10)0.0101 (9)0.0056 (9)
C210.0672 (12)0.0562 (12)0.0416 (10)0.0042 (10)0.0093 (9)0.0067 (9)
C220.0682 (13)0.0724 (15)0.0539 (12)−0.0063 (12)0.0141 (10)0.0115 (11)
C230.0898 (17)0.0626 (13)0.0522 (12)−0.0185 (12)−0.0031 (12)0.0072 (10)
C240.104 (2)0.0758 (16)0.0554 (13)0.0010 (15)0.0260 (13)−0.0034 (12)
N1B0.109 (3)0.0531 (11)0.0414 (12)−0.0068 (14)0.0131 (15)0.0041 (9)
N2B0.130 (3)0.0623 (12)0.0421 (10)0.0090 (15)0.0068 (13)0.0061 (9)
C3B0.079 (3)0.0616 (15)0.0408 (12)−0.006 (2)0.0041 (17)0.0034 (11)
C4B0.107 (4)0.0719 (16)0.0580 (14)0.006 (2)0.001 (2)0.0083 (12)
C5B0.109 (4)0.0531 (13)0.0435 (13)0.002 (2)0.012 (2)0.0063 (10)
N1A—C11.315 (6)C20—C211.391 (3)
N1A—C5A1.484 (7)C21—C221.376 (3)
N1B—C5B1.47 (2)C21—C241.505 (3)
N1B—C11.268 (17)C22—C231.383 (3)
N2A—C3A1.475 (7)C3A—H1A1.0000
N2A—C21.287 (6)C3B—H6B1.0000
N2B—C21.316 (17)C4A—H3A0.9800
N2B—C3B1.48 (2)C4A—H4A0.9800
C1—C61.486 (3)C4A—H2A0.9800
C1—C21.471 (3)C4B—H7B0.9800
C2—C121.491 (3)C4B—H8B0.9800
C3A—C4A1.515 (7)C4B—H9B0.9800
C3A—C5A1.538 (6)C5A—H5A1.0000
C3B—C4B1.51 (2)C5B—H10B1.0000
C3B—C5B1.520 (13)C7—H7A0.9500
C5A—C181.546 (5)C8—H8A0.9500
C5B—C181.470 (11)C9—H9A0.9500
C6—C71.394 (3)C10—H10A0.9500
C6—C111.383 (3)C11—H11A0.9500
C7—C81.388 (3)C13—H13A0.9500
C8—C91.377 (3)C14—H14A0.9500
C9—C101.379 (3)C15—H15A0.9500
C10—C111.392 (3)C16—H16A0.9500
C12—C131.392 (3)C17—H17A0.9500
C12—C171.394 (3)C19—H19A0.9500
C13—C141.389 (3)C20—H20A0.9500
C14—C151.386 (3)C22—H22A0.9500
C15—C161.378 (3)C23—H23A0.9500
C16—C171.390 (3)C24—H24B0.9800
C18—C191.393 (4)C24—H24C0.9800
C18—C231.377 (4)C24—H24A0.9800
C19—C201.380 (3)
C1—N1A—C5A114.1 (4)C5A—C3A—H1A110.00
C1—N1B—C5B114.9 (14)C5B—C3B—H6B109.00
C2—N2A—C3A116.3 (5)N2B—C3B—H6B109.00
C2—N2B—C3B115.7 (14)C4B—C3B—H6B109.00
N1A—C1—C6116.2 (3)C3A—C4A—H3A110.00
C2—C1—C6121.89 (19)H2A—C4A—H4A109.00
N1B—C1—C6119.0 (7)C3A—C4A—H4A109.00
N1B—C1—C2118.6 (8)H2A—C4A—H3A110.00
N1A—C1—C2121.8 (3)C3A—C4A—H2A109.00
N2A—C2—C1120.3 (3)H3A—C4A—H4A110.00
N2B—C2—C1119.4 (8)C3B—C4B—H7B109.00
N2B—C2—C12118.2 (7)C3B—C4B—H9B109.00
N2A—C2—C12117.3 (3)H7B—C4B—H8B110.00
C1—C2—C12122.3 (2)C3B—C4B—H8B109.00
C4A—C3A—C5A112.7 (4)H8B—C4B—H9B109.00
N2A—C3A—C4A107.9 (4)H7B—C4B—H9B110.00
N2A—C3A—C5A106.1 (4)C3A—C5A—H5A112.00
N2B—C3B—C4B107.0 (14)C18—C5A—H5A112.00
N2B—C3B—C5B108.9 (11)N1A—C5A—H5A112.00
C4B—C3B—C5B112.9 (12)C18—C5B—H10B103.00
C3A—C5A—C18109.4 (4)C3B—C5B—H10B103.00
N1A—C5A—C3A106.0 (4)N1B—C5B—H10B103.00
N1A—C5A—C18105.7 (4)C8—C7—H7A120.00
N1B—C5B—C18115.2 (10)C6—C7—H7A120.00
C3B—C5B—C18117.0 (9)C7—C8—H8A120.00
N1B—C5B—C3B113.1 (11)C9—C8—H8A120.00
C7—C6—C11119.0 (2)C10—C9—H9A120.00
C1—C6—C7119.1 (2)C8—C9—H9A120.00
C1—C6—C11121.89 (19)C9—C10—H10A120.00
C6—C7—C8120.2 (2)C11—C10—H10A120.00
C7—C8—C9120.4 (2)C6—C11—H11A120.00
C8—C9—C10119.7 (2)C10—C11—H11A120.00
C9—C10—C11120.3 (2)C12—C13—H13A120.00
C6—C11—C10120.4 (2)C14—C13—H13A120.00
C2—C12—C13121.1 (2)C15—C14—H14A120.00
C2—C12—C17120.1 (2)C13—C14—H14A120.00
C13—C12—C17118.8 (2)C14—C15—H15A120.00
C12—C13—C14120.5 (2)C16—C15—H15A120.00
C13—C14—C15119.9 (2)C17—C16—H16A120.00
C14—C15—C16120.3 (2)C15—C16—H16A120.00
C15—C16—C17119.9 (2)C12—C17—H17A120.00
C12—C17—C16120.6 (2)C16—C17—H17A120.00
C5A—C18—C19116.1 (3)C18—C19—H19A120.00
C5A—C18—C23125.8 (3)C20—C19—H19A120.00
C19—C18—C23118.1 (2)C21—C20—H20A119.00
C5B—C18—C19135.8 (6)C19—C20—H20A119.00
C5B—C18—C23105.2 (6)C21—C22—H22A119.00
C18—C19—C20120.7 (2)C23—C22—H22A119.00
C19—C20—C21121.0 (2)C18—C23—H23A119.00
C20—C21—C22117.9 (2)C22—C23—H23A120.00
C20—C21—C24120.9 (2)H24B—C24—H24C109.00
C22—C21—C24121.2 (2)H24A—C24—H24B109.00
C21—C22—C23121.3 (2)H24A—C24—H24C109.00
C18—C23—C22121.0 (2)C21—C24—H24A109.00
N2A—C3A—H1A110.00C21—C24—H24B109.00
C4A—C3A—H1A110.00C21—C24—H24C109.00
C5A—N1A—C1—C2−9.5 (7)C3A—C5A—C18—C2377.9 (4)
C5A—N1A—C1—C6174.5 (4)C1—C6—C7—C8179.3 (2)
C1—N1A—C5A—C18164.4 (5)C11—C6—C7—C81.4 (3)
C1—N1A—C5A—C3A48.4 (7)C1—C6—C11—C10−177.9 (2)
C3A—N2A—C2—C1−8.4 (10)C7—C6—C11—C10−0.1 (3)
C2—N2A—C3A—C5A47.6 (9)C6—C7—C8—C9−1.1 (4)
C2—N2A—C3A—C4A168.7 (7)C7—C8—C9—C10−0.6 (4)
C3A—N2A—C2—C12175.2 (5)C8—C9—C10—C111.9 (4)
C6—C1—C2—C12−21.6 (4)C9—C10—C11—C6−1.6 (3)
N1A—C1—C6—C7−44.7 (5)C2—C12—C13—C14−178.8 (2)
N1A—C1—C2—C12162.6 (4)C17—C12—C13—C14−0.5 (4)
C6—C1—C2—N2A162.2 (6)C2—C12—C17—C16179.6 (2)
N1A—C1—C6—C11133.2 (4)C13—C12—C17—C161.3 (4)
C2—C1—C6—C11−42.8 (3)C12—C13—C14—C15−0.9 (4)
N1A—C1—C2—N2A−13.6 (7)C13—C14—C15—C161.5 (4)
C2—C1—C6—C7139.4 (2)C14—C15—C16—C17−0.6 (4)
N2A—C2—C12—C13137.5 (6)C15—C16—C17—C12−0.8 (4)
N2A—C2—C12—C17−40.8 (6)C5A—C18—C19—C20−179.3 (3)
C1—C2—C12—C17143.0 (2)C23—C18—C19—C20−0.5 (4)
C1—C2—C12—C13−38.8 (4)C5A—C18—C23—C22179.4 (3)
N2A—C3A—C5A—N1A−66.7 (6)C19—C18—C23—C220.6 (4)
C4A—C3A—C5A—C1861.9 (6)C18—C19—C20—C210.5 (4)
N2A—C3A—C5A—C18179.8 (4)C19—C20—C21—C22−0.7 (3)
C4A—C3A—C5A—N1A175.4 (5)C19—C20—C21—C24178.1 (2)
N1A—C5A—C18—C19143.0 (4)C20—C21—C22—C230.9 (3)
N1A—C5A—C18—C23−35.7 (5)C24—C21—C22—C23−177.9 (2)
C3A—C5A—C18—C19−103.3 (4)C21—C22—C23—C18−0.9 (4)
D—H···AD—HH···AD···AD—H···A
C10—H10A···Cg4i0.952.953.743 (3)142
C19—H19A···Cg4ii0.952.773.578 (3)143
C22—H22A···Cg3iii0.952.663.590 (3)165
Table 1

Hydrogen-bond geometry (Å, °)

Cg3 and Cg4 are the centroids of the C6–C11 and C12–C17 phenyl rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C10—H10ACg4i 0.952.953.743 (3)142
C19—H19ACg4ii 0.952.773.578 (3)143
C22—H22ACg3iii 0.952.663.590 (3)165

Symmetry codes: (i) ; (ii) ; (iii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Methyl-3,5,6-triphenyl-2,3-dihydro-pyrazine.

Authors:  N Anuradha; A Thiruvalluvar; K Pandiarajan; S Chitra; R J Butcher
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-18

3.  2-(2-Chloro-phen-yl)-3-methyl-5,6-diphenyl-2,3-dihydro-pyrazine.

Authors:  N Anuradha; S Chitra; A Thiruvalluvar; K Pandiarajan; R J Butcher; J P Jasinski; J A Golen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-14

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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