Literature DB >> 23284340

Bis[μ-(3-acetyl-2-hy-droxy-6-methyl-4H-pyran-4-one-κ(3)O:O',O'')]diaqua-tetra-kis-(pyridine-κN)dicopper(II) diperchlorate.

Ali Ourari1, Wassila Derafa, Sofiane Bouacida, Djouhra Aggoun, Jean-Claude Daran.   

Abstract

In the centrosymmetric binuclear cation of the title compound, [Cu(C(8)H(7)O(4))(H(2)O)(C(5)H(5)N)(2)](2)(ClO(4))(2), the Cu(II) atoms are bridged by a pair of two dehydro-acetate anions in a bis-/monodentate mode. The distorted octa-hedral N(2)O(4) coordination sphere of the metal cation is completed by two pyridine N atoms and one O atom of a water mol-ecule. The complex cations and the perchlorate counter anions are arranged in layers parallel to (100). O-H⋯O hydrogen bonds between the coordinating water mol-ecules and the perchlorate anions constitute ribbons parallel to [10-1]. C-H⋯O hydrogen bonds are also observed.

Entities:  

Year:  2012        PMID: 23284340      PMCID: PMC3515113          DOI: 10.1107/S1600536812041608

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of similar compounds, see: Tan & Kok-Peng Ang (1988 ▶); El-Kubaisi & Ismail (1994 ▶); Danilova et al. (2003 ▶); Munde et al. (2010 ▶); Ourari et al. (2011 ▶). For applications of related compounds, see: Maiti et al. (1988 ▶); Mohan et al. (1981 ▶); Das & Livingstone (1976 ▶); Ourari et al. (2008 ▶, 2012 ▶).

Experimental

Crystal data

[Cu(C8H7O4)(H2O)(C5H5N)2]2(ClO4)2 M = 1012.70 Triclinic, a = 9.9371 (4) Å b = 10.3072 (4) Å c = 10.4440 (5) Å α = 99.624 (4)° β = 90.540 (3)° γ = 97.895 (4)° V = 1044.09 (8) Å3 Z = 1 Mo Kα radiation μ = 1.23 mm−1 T = 180 K 0.44 × 0.34 × 0.13 mm

Data collection

Agilent Xcalibur diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.505, T max = 1.000 20280 measured reflections 4692 independent reflections 3889 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.140 S = 1.12 4692 reflections 288 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.14 e Å−3 Δρmin = −0.65 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR2002 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and DIAMOND (Brandenburg & Berndt, 2001 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812041608/wm2685sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812041608/wm2685Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C8H7O4)(H2O)(C5H5N)2]2(ClO4)2Z = 1
Mr = 1012.70F(000) = 518
Triclinic, P1Dx = 1.611 Mg m3
a = 9.9371 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.3072 (4) ÅCell parameters from 12265 reflections
c = 10.4440 (5) Åθ = 2.6–28.3°
α = 99.624 (4)°µ = 1.23 mm1
β = 90.540 (3)°T = 180 K
γ = 97.895 (4)°Fragment, dark blue
V = 1044.09 (8) Å30.44 × 0.34 × 0.13 mm
Agilent Xcalibur diffractometer4692 independent reflections
Radiation source: fine-focus sealed tube3889 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.037
Detector resolution: 8.2632 pixels mm-1θmax = 28.2°, θmin = 2.7°
ω scansh = −13→11
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −13→13
Tmin = 0.505, Tmax = 1.000l = −13→13
20280 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140H atoms treated by a mixture of independent and constrained refinement
S = 1.12w = 1/[σ2(Fo2) + (0.0426P)2 + 3.6572P] where P = (Fo2 + 2Fc2)/3
4692 reflections(Δ/σ)max < 0.001
288 parametersΔρmax = 1.14 e Å3
0 restraintsΔρmin = −0.65 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.13889 (5)0.33620 (4)0.22133 (5)0.02379 (14)
Cl10.54880 (11)0.73089 (10)0.34098 (11)0.0366 (3)
O30.2147 (3)0.7115 (3)−0.0994 (3)0.0314 (6)
O40.0272 (3)0.7603 (3)−0.0061 (3)0.0397 (7)
O20.0424 (3)0.4919 (3)0.2469 (3)0.0287 (6)
O10.2610 (3)0.4210 (3)0.1090 (3)0.0294 (6)
O1W0.2668 (4)0.4378 (4)0.4076 (4)0.0436 (8)
H1W0.322 (6)0.498 (6)0.387 (6)0.052*
H2W0.304 (6)0.415 (6)0.459 (6)0.052*
O140.5337 (5)0.8399 (4)0.4391 (4)0.0721 (13)
N10.2368 (3)0.1771 (3)0.1824 (3)0.0240 (6)
N2−0.0062 (3)0.2363 (3)0.3136 (3)0.0248 (7)
O130.5953 (5)0.7736 (5)0.2227 (4)0.0706 (12)
C120.3329 (4)0.5426 (4)−0.0505 (4)0.0270 (8)
H120.4040.4928−0.06780.032*
C10.2806 (4)0.1181 (4)0.2765 (4)0.0293 (8)
H10.26620.15310.36250.035*
C160.1369 (4)0.5980 (3)0.0778 (4)0.0223 (7)
C150.1196 (4)0.6938 (4)−0.0055 (4)0.0267 (8)
C20.3464 (5)0.0069 (4)0.2508 (4)0.0347 (10)
H20.3773−0.03120.31820.042*
C18−0.0449 (5)0.6868 (4)0.2296 (4)0.0332 (9)
H18A−0.11730.67940.16620.05*
H18B0.00550.77460.24090.05*
H18C−0.08210.67060.31090.05*
C50.2587 (4)0.1269 (4)0.0587 (4)0.0302 (9)
H50.23090.1692−0.00690.036*
C110.2416 (4)0.5159 (3)0.0508 (4)0.0230 (7)
C40.3208 (5)0.0149 (4)0.0251 (4)0.0372 (10)
H40.3326−0.019−0.06160.045*
C30.3650 (5)−0.0458 (4)0.1227 (4)0.0371 (10)
H30.407−0.12160.10240.044*
C10−0.0591 (4)0.1101 (4)0.2648 (4)0.0293 (8)
H10−0.0210.06710.19140.035*
C130.3180 (4)0.6368 (4)−0.1201 (4)0.0277 (8)
C140.4058 (5)0.6759 (5)−0.2262 (5)0.0427 (11)
H14A0.48260.6283−0.23230.064*
H14B0.43680.7697−0.20760.064*
H14C0.35450.6549−0.30710.064*
C170.0485 (4)0.5860 (4)0.1837 (4)0.0230 (7)
C9−0.1668 (5)0.0422 (4)0.3184 (4)0.0363 (10)
H9−0.1997−0.04550.28290.044*
C8−0.2253 (5)0.1065 (5)0.4261 (5)0.0395 (10)
H8−0.30.06370.46290.047*
C7−0.1711 (5)0.2350 (5)0.4780 (4)0.0410 (11)
H7−0.20750.27970.55150.049*
O110.6447 (9)0.6599 (10)0.3795 (6)0.179 (5)
O120.4201 (7)0.6613 (8)0.3069 (6)0.140 (3)
C6−0.0622 (5)0.2967 (4)0.4196 (4)0.0318 (9)
H6−0.02610.38350.4550.038*
U11U22U33U12U13U23
Cu10.0241 (3)0.0198 (2)0.0295 (2)0.00679 (17)0.00515 (18)0.00681 (17)
Cl10.0365 (6)0.0255 (5)0.0483 (6)0.0053 (4)0.0024 (5)0.0072 (4)
O30.0299 (16)0.0301 (14)0.0389 (16)0.0094 (12)0.0052 (12)0.0152 (12)
O40.0356 (17)0.0455 (18)0.0476 (18)0.0221 (14)0.0078 (14)0.0220 (15)
O20.0314 (15)0.0247 (13)0.0324 (14)0.0084 (11)0.0070 (12)0.0075 (11)
O10.0255 (15)0.0268 (14)0.0412 (16)0.0114 (11)0.0075 (12)0.0143 (12)
O1W0.050 (2)0.0353 (18)0.0444 (19)0.0003 (15)−0.0157 (16)0.0085 (15)
O140.107 (4)0.050 (2)0.054 (2)0.015 (2)−0.005 (2)−0.0095 (18)
N10.0224 (16)0.0226 (15)0.0284 (16)0.0053 (12)0.0029 (13)0.0068 (12)
N20.0257 (17)0.0219 (15)0.0277 (16)0.0055 (13)0.0012 (13)0.0044 (12)
O130.080 (3)0.078 (3)0.057 (2)0.005 (2)0.007 (2)0.028 (2)
C120.0186 (19)0.0291 (19)0.034 (2)0.0055 (15)0.0027 (16)0.0067 (16)
C10.033 (2)0.030 (2)0.0273 (19)0.0101 (17)0.0069 (16)0.0080 (15)
C160.0181 (18)0.0178 (16)0.0297 (18)−0.0008 (14)−0.0027 (14)0.0030 (14)
C150.0223 (19)0.0242 (18)0.034 (2)0.0038 (15)−0.0024 (16)0.0063 (15)
C20.041 (3)0.032 (2)0.036 (2)0.0147 (19)0.0022 (19)0.0151 (17)
C180.037 (2)0.032 (2)0.034 (2)0.0153 (18)0.0069 (18)0.0038 (17)
C50.033 (2)0.031 (2)0.0293 (19)0.0107 (17)0.0014 (17)0.0066 (16)
C110.0191 (18)0.0190 (16)0.0306 (19)0.0011 (14)−0.0028 (15)0.0050 (14)
C40.044 (3)0.035 (2)0.032 (2)0.016 (2)−0.0001 (19)−0.0030 (17)
C30.039 (3)0.030 (2)0.045 (2)0.0190 (19)0.002 (2)0.0024 (18)
C100.029 (2)0.0258 (19)0.032 (2)0.0012 (16)0.0049 (17)0.0031 (15)
C130.0200 (19)0.0275 (19)0.035 (2)0.0015 (15)−0.0001 (16)0.0067 (16)
C140.038 (3)0.045 (3)0.052 (3)0.011 (2)0.015 (2)0.022 (2)
C170.0201 (18)0.0207 (17)0.0277 (18)0.0035 (14)−0.0028 (14)0.0020 (14)
C90.037 (2)0.032 (2)0.038 (2)−0.0039 (18)0.0037 (19)0.0062 (18)
C80.032 (2)0.048 (3)0.041 (2)0.000 (2)0.0091 (19)0.016 (2)
C70.045 (3)0.045 (3)0.036 (2)0.012 (2)0.019 (2)0.0074 (19)
O110.250 (9)0.288 (10)0.075 (4)0.234 (9)0.050 (5)0.081 (5)
O120.113 (5)0.165 (6)0.098 (4)−0.085 (5)0.023 (4)−0.027 (4)
C60.037 (2)0.029 (2)0.028 (2)0.0066 (17)0.0056 (17)0.0011 (16)
Cu1—O11.922 (3)C16—C111.431 (5)
Cu1—O21.962 (3)C16—C151.447 (5)
Cu1—N22.005 (3)C2—C31.382 (6)
Cu1—N12.006 (3)C2—H20.93
Cu1—O1W2.325 (3)C18—C171.509 (5)
Cu1—O4i2.737 (3)C18—H18A0.96
Cl1—O111.374 (5)C18—H18B0.96
Cl1—O121.390 (6)C18—H18C0.96
Cl1—O141.414 (4)C5—C41.379 (5)
Cl1—O131.439 (4)C5—H50.93
O3—C131.363 (5)C4—C31.380 (6)
O3—C151.386 (5)C4—H40.93
O4—C151.219 (5)C3—H30.93
O2—C171.256 (4)C10—C91.373 (6)
O1—C111.269 (4)C10—H100.93
O1W—H1W0.82 (6)C13—C141.491 (6)
O1W—H2W0.74 (6)C14—H14A0.96
N1—C11.337 (5)C14—H14B0.96
N1—C51.340 (5)C14—H14C0.96
N2—C61.341 (5)C9—C81.383 (6)
N2—C101.346 (5)C9—H90.93
C12—C131.329 (5)C8—C71.377 (7)
C12—C111.437 (5)C8—H80.93
C12—H120.93C7—C61.378 (6)
C1—C21.385 (5)C7—H70.93
C1—H10.93C6—H60.93
C16—C171.430 (5)
O1—Cu1—O289.43 (12)C1—C2—H2120.8
O1—Cu1—N2171.16 (14)C17—C18—H18A109.5
O2—Cu1—N290.52 (13)C17—C18—H18B109.5
O1—Cu1—N188.01 (13)H18A—C18—H18B109.5
O2—Cu1—N1176.25 (14)C17—C18—H18C109.5
N2—Cu1—N191.58 (14)H18A—C18—H18C109.5
O1—Cu1—O1W92.98 (14)H18B—C18—H18C109.5
O2—Cu1—O1W86.49 (13)N1—C5—C4122.4 (4)
N2—Cu1—O1W95.84 (14)N1—C5—H5118.8
N1—Cu1—O1W96.38 (14)C4—C5—H5118.8
O1—Cu1—O4i87.05 (12)O1—C11—C16125.5 (4)
O2—Cu1—O4i87.41 (12)O1—C11—C12117.0 (3)
N2—Cu1—O4i84.12 (13)C16—C11—C12117.6 (3)
N1—Cu1—O4i89.71 (12)C5—C4—C3118.7 (4)
O1W—Cu1—O4i173.90 (11)C5—C4—H4120.6
O11—Cl1—O12116.7 (6)C3—C4—H4120.6
O11—Cl1—O14110.3 (4)C4—C3—C2119.4 (4)
O12—Cl1—O14107.6 (4)C4—C3—H3120.3
O11—Cl1—O13106.5 (4)C2—C3—H3120.3
O12—Cl1—O13103.9 (4)N2—C10—C9122.9 (4)
O14—Cl1—O13111.7 (3)N2—C10—H10118.5
C13—O3—C15122.2 (3)C9—C10—H10118.5
C17—O2—Cu1129.4 (2)C12—C13—O3121.5 (4)
C11—O1—Cu1127.4 (2)C12—C13—C14127.0 (4)
Cu1—O1W—H1W107 (4)O3—C13—C14111.5 (3)
Cu1—O1W—H2W135 (5)C13—C14—H14A109.5
H1W—O1W—H2W103 (6)C13—C14—H14B109.5
C1—N1—C5118.5 (3)H14A—C14—H14B109.5
C1—N1—Cu1122.0 (3)C13—C14—H14C109.5
C5—N1—Cu1119.5 (3)H14A—C14—H14C109.5
C6—N2—C10117.7 (4)H14B—C14—H14C109.5
C6—N2—Cu1120.9 (3)O2—C17—C16123.2 (3)
C10—N2—Cu1121.1 (3)O2—C17—C18114.3 (3)
C13—C12—C11121.4 (4)C16—C17—C18122.4 (3)
C13—C12—H12119.3C10—C9—C8118.8 (4)
C11—C12—H12119.3C10—C9—H9120.6
N1—C1—C2122.5 (4)C8—C9—H9120.6
N1—C1—H1118.7C7—C8—C9118.8 (4)
C2—C1—H1118.7C7—C8—H8120.6
C17—C16—C11121.5 (3)C9—C8—H8120.6
C17—C16—C15119.6 (3)C8—C7—C6119.2 (4)
C11—C16—C15118.9 (3)C8—C7—H7120.4
O4—C15—O3114.4 (3)C6—C7—H7120.4
O4—C15—C16127.6 (4)N2—C6—C7122.5 (4)
O3—C15—C16118.0 (3)N2—C6—H6118.7
C3—C2—C1118.4 (4)C7—C6—H6118.7
C3—C2—H2120.8
O1—Cu1—O2—C1714.4 (3)Cu1—O1—C11—C1613.9 (6)
N2—Cu1—O2—C17−156.7 (3)Cu1—O1—C11—C12−166.1 (3)
O1W—Cu1—O2—C17107.5 (3)C17—C16—C11—O15.2 (6)
O2—Cu1—O1—C11−19.7 (3)C15—C16—C11—O1−174.0 (4)
N1—Cu1—O1—C11157.4 (3)C17—C16—C11—C12−174.8 (3)
O1W—Cu1—O1—C11−106.1 (3)C15—C16—C11—C126.0 (5)
O1—Cu1—N1—C1130.8 (3)C13—C12—C11—O1177.6 (4)
N2—Cu1—N1—C1−58.0 (3)C13—C12—C11—C16−2.4 (6)
O1W—Cu1—N1—C138.0 (3)N1—C5—C4—C3−1.6 (7)
O1—Cu1—N1—C5−49.7 (3)C5—C4—C3—C2−0.1 (7)
N2—Cu1—N1—C5121.5 (3)C1—C2—C3—C41.5 (7)
O1W—Cu1—N1—C5−142.6 (3)C6—N2—C10—C90.2 (6)
O2—Cu1—N2—C6−39.9 (3)Cu1—N2—C10—C9−174.0 (3)
N1—Cu1—N2—C6143.3 (3)C11—C12—C13—O3−0.7 (6)
O1W—Cu1—N2—C646.5 (3)C11—C12—C13—C14179.1 (4)
O2—Cu1—N2—C10134.0 (3)C15—O3—C13—C12−0.1 (6)
N1—Cu1—N2—C10−42.8 (3)C15—O3—C13—C14−179.9 (4)
O1W—Cu1—N2—C10−139.6 (3)Cu1—O2—C17—C16−2.4 (5)
C5—N1—C1—C2−0.5 (6)Cu1—O2—C17—C18178.1 (3)
Cu1—N1—C1—C2179.0 (3)C11—C16—C17—O2−11.1 (6)
C13—O3—C15—O4−174.1 (4)C15—C16—C17—O2168.1 (4)
C13—O3—C15—C163.8 (5)C11—C16—C17—C18168.4 (4)
C17—C16—C15—O4−8.3 (6)C15—C16—C17—C18−12.4 (5)
C11—C16—C15—O4170.9 (4)N2—C10—C9—C81.1 (7)
C17—C16—C15—O3174.0 (3)C10—C9—C8—C7−1.9 (7)
C11—C16—C15—O3−6.7 (5)C9—C8—C7—C61.4 (7)
N1—C1—C2—C3−1.2 (7)C10—N2—C6—C7−0.7 (6)
C1—N1—C5—C42.0 (6)Cu1—N2—C6—C7173.5 (3)
Cu1—N1—C5—C4−177.5 (3)C8—C7—C6—N2−0.1 (7)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···O120.83 (6)2.13 (6)2.934 (9)165 (6)
O1W—H2W···O11ii0.74 (6)2.06 (6)2.772 (9)164 (6)
C9—H9···O13iii0.932.563.389 (7)148
Table 1

Selected bond lengths (Å)

Cu1—O11.922 (3)
Cu1—O21.962 (3)
Cu1—N22.005 (3)
Cu1—N12.006 (3)
Cu1—O1W 2.325 (3)
Cu1—O4i 2.737 (3)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H1W⋯O120.83 (6)2.13 (6)2.934 (9)165 (6)
O1W—H2W⋯O11ii 0.74 (6)2.06 (6)2.772 (9)164 (6)
C9—H9⋯O13iii 0.932.563.389 (7)148

Symmetry codes: (ii) ; (iii) .

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Journal:  J Mol Struct       Date:  2022-04-30       Impact factor: 3.841

  1 in total

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