| Literature DB >> 22199528 |
Ali Ourari, Wassila Derafa, Sofiane Bouacida, Djouhra Aggoun.
Abstract
In the title compound, {[Cu(C(10)H(13)N(2)O(3))(C(5)H(5)N)]ClO(4)}(n), the Cu(II) atom has an N(3)O(2) coordination sphere. The complex contains two different ligands, viz. a pyridine mol-ecule and a Schiff base mol-ecule, resulting from the condensation of ethyl-enodiamine with dehydro-acetic acid. The Cu(II) atom exhibits a square-pyramidal geometry: three of the four donors of the pyramid base belong to the Schiff base ligand (an N atom from the amine group, a second N atom from the imine group and the O atom of the pyran-one residue) and the fourth donor is the pyridine N atom. The coordination around the metal ion is completed by a longer axial bond to the pyran-one O atom of an adjacent Schiff base, so forming a one-dimensional polymer. The complex has a +1 charge that is compensated by a perchlorate ion. The crystal packing, which can be described as alternating chains of cations and tetra-hedral perchlorate anions along the a axis, is stabilized by inter-molecular N-H⋯O, C-H⋯O and C-H⋯N hydrogen-bonding interactions.Entities:
Year: 2011 PMID: 22199528 PMCID: PMC3238637 DOI: 10.1107/S1600536811046411
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C10H13N2O3)(C5H5N)]ClO4 | |
| Mo | |
| Orthorhombic, | Cell parameters from 4212 reflections |
| θ = 1.0–26.4° | |
| µ = 1.38 mm−1 | |
| Plate, black | |
| 0.12 × 0.11 × 0.05 mm | |
| Nonius KappaCCD diffractometer | 2619 reflections with |
| Radiation source: Enraf Nonius FR590 | |
| graphite | θmax = 26.4°, θmin = 3.1° |
| Detector resolution: 9 pixels mm-1 | |
| CCD rotation images, thick slices scans | |
| 7008 measured reflections | |
| 3731 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3731 reflections | (Δ/σ)max = 0.001 |
| 246 parameters | Δρmax = 0.45 e Å−3 |
| 0 restraints | Δρmin = −0.49 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.2273 (4) | 0.02862 (16) | 0.45790 (16) | 0.0517 (8) | |
| H1 | 0.1798 | 0.0658 | 0.4399 | 0.062* | |
| C2 | 0.3060 (4) | −0.01413 (18) | 0.41827 (18) | 0.0600 (9) | |
| H2 | 0.311 | −0.0058 | 0.3746 | 0.072* | |
| C3 | 0.3770 (4) | −0.06940 (19) | 0.4441 (2) | 0.0600 (9) | |
| H3 | 0.4319 | −0.0988 | 0.4183 | 0.072* | |
| C4 | 0.3652 (4) | −0.08009 (18) | 0.5081 (2) | 0.0630 (10) | |
| H4 | 0.4119 | −0.1171 | 0.5268 | 0.076* | |
| C5 | 0.2830 (4) | −0.03545 (16) | 0.54523 (18) | 0.0560 (8) | |
| H5 | 0.2742 | −0.0439 | 0.5888 | 0.067* | |
| C6 | 0.1257 (4) | 0.09736 (17) | 0.71225 (16) | 0.0559 (9) | |
| H6A | 0.1883 | 0.137 | 0.7179 | 0.067* | |
| H6B | 0.1258 | 0.0722 | 0.752 | 0.067* | |
| C7 | −0.0333 (4) | 0.11746 (18) | 0.69521 (16) | 0.0567 (9) | |
| H7A | −0.1003 | 0.0789 | 0.6975 | 0.068* | |
| H7B | −0.0699 | 0.1514 | 0.7247 | 0.068* | |
| C8 | −0.2344 (4) | 0.22163 (17) | 0.65805 (17) | 0.0576 (9) | |
| H8A | −0.2762 | 0.1859 | 0.6834 | 0.086* | |
| H8B | −0.3139 | 0.2426 | 0.6338 | 0.086* | |
| H8C | −0.1879 | 0.2543 | 0.6856 | 0.086* | |
| C9 | −0.1166 (3) | 0.19342 (14) | 0.61287 (14) | 0.0398 (6) | |
| C10 | −0.1085 (3) | 0.21966 (14) | 0.54728 (14) | 0.0380 (6) | |
| C11 | −0.1603 (3) | 0.28666 (15) | 0.53460 (15) | 0.0430 (7) | |
| C12 | −0.1244 (4) | 0.26748 (18) | 0.42205 (14) | 0.0508 (8) | |
| C13 | −0.1460 (6) | 0.3012 (2) | 0.3588 (2) | 0.0908 (15) | |
| H13A | −0.0797 | 0.3394 | 0.3559 | 0.136* | |
| H13B | −0.2495 | 0.3158 | 0.3549 | 0.136* | |
| H13C | −0.1228 | 0.2702 | 0.3251 | 0.136* | |
| C14 | −0.0700 (4) | 0.20627 (18) | 0.43217 (15) | 0.0562 (9) | |
| H14 | −0.0417 | 0.1798 | 0.3975 | 0.067* | |
| C15 | −0.0541 (3) | 0.18023 (15) | 0.49603 (14) | 0.0423 (7) | |
| N1 | 0.2158 (3) | 0.01933 (12) | 0.52137 (12) | 0.0432 (6) | |
| N2 | 0.1869 (3) | 0.05540 (13) | 0.65998 (12) | 0.0532 (7) | |
| H2A | 0.1582 | 0.0124 | 0.6655 | 0.064* | |
| H2B | 0.289 | 0.057 | 0.6602 | 0.064* | |
| N3 | −0.0300 (3) | 0.14435 (12) | 0.62977 (12) | 0.0429 (6) | |
| O1 | 0.0066 (2) | 0.12212 (10) | 0.50150 (10) | 0.0491 (5) | |
| O2 | −0.1684 (3) | 0.30769 (10) | 0.47159 (11) | 0.0541 (6) | |
| O3 | −0.1950 (3) | 0.33001 (10) | 0.57362 (11) | 0.0519 (6) | |
| O11 | −0.1778 (3) | 0.09728 (16) | 0.29504 (16) | 0.0869 (9) | |
| O21 | 0.0241 (4) | 0.16739 (14) | 0.26635 (16) | 0.0868 (9) | |
| O31 | −0.0210 (4) | 0.06891 (19) | 0.21098 (16) | 0.1067 (11) | |
| O41 | 0.0701 (4) | 0.06507 (16) | 0.31535 (17) | 0.0910 (10) | |
| Cl1 | −0.02517 (10) | 0.09943 (4) | 0.27165 (4) | 0.0553 (2) | |
| Cu1 | 0.10791 (4) | 0.089862 (17) | 0.576431 (17) | 0.03931 (14) |
| C1 | 0.057 (2) | 0.0475 (18) | 0.0504 (19) | 0.0085 (15) | 0.0026 (16) | −0.0018 (15) |
| C2 | 0.065 (2) | 0.062 (2) | 0.053 (2) | 0.0106 (18) | 0.0082 (17) | −0.0093 (16) |
| C3 | 0.054 (2) | 0.057 (2) | 0.069 (2) | 0.0124 (16) | 0.0062 (17) | −0.0149 (19) |
| C4 | 0.063 (2) | 0.0489 (19) | 0.078 (3) | 0.0197 (16) | −0.0030 (19) | −0.0071 (18) |
| C5 | 0.064 (2) | 0.0480 (18) | 0.056 (2) | 0.0109 (16) | −0.0041 (17) | −0.0006 (16) |
| C6 | 0.075 (2) | 0.0528 (19) | 0.0397 (18) | 0.0080 (17) | −0.0046 (16) | 0.0028 (14) |
| C7 | 0.070 (2) | 0.062 (2) | 0.0386 (18) | 0.0066 (17) | 0.0109 (16) | 0.0073 (16) |
| C8 | 0.065 (2) | 0.0550 (19) | 0.053 (2) | 0.0112 (17) | 0.0181 (17) | 0.0024 (16) |
| C9 | 0.0388 (15) | 0.0399 (15) | 0.0406 (16) | −0.0040 (12) | 0.0029 (12) | −0.0041 (12) |
| C10 | 0.0381 (15) | 0.0365 (14) | 0.0392 (15) | 0.0007 (12) | −0.0003 (12) | 0.0003 (12) |
| C11 | 0.0422 (16) | 0.0434 (16) | 0.0434 (17) | −0.0011 (13) | 0.0003 (13) | 0.0008 (13) |
| C12 | 0.062 (2) | 0.0546 (19) | 0.0354 (17) | 0.0125 (15) | 0.0016 (14) | 0.0023 (14) |
| C13 | 0.123 (4) | 0.094 (3) | 0.055 (3) | 0.040 (3) | 0.002 (2) | 0.021 (2) |
| C14 | 0.073 (2) | 0.061 (2) | 0.0352 (17) | 0.0186 (17) | −0.0016 (15) | −0.0023 (14) |
| C15 | 0.0423 (16) | 0.0458 (16) | 0.0387 (16) | 0.0055 (13) | −0.0009 (12) | −0.0036 (13) |
| N1 | 0.0465 (14) | 0.0377 (12) | 0.0456 (15) | 0.0032 (10) | −0.0024 (11) | −0.0017 (11) |
| N2 | 0.0679 (18) | 0.0489 (15) | 0.0428 (15) | 0.0100 (13) | −0.0001 (13) | 0.0044 (12) |
| N3 | 0.0466 (15) | 0.0428 (13) | 0.0394 (14) | 0.0003 (11) | 0.0031 (11) | 0.0037 (11) |
| O1 | 0.0591 (13) | 0.0467 (12) | 0.0415 (12) | 0.0163 (10) | −0.0048 (10) | −0.0058 (9) |
| O2 | 0.0671 (14) | 0.0458 (12) | 0.0494 (13) | 0.0110 (11) | 0.0009 (11) | 0.0060 (10) |
| O3 | 0.0640 (14) | 0.0388 (11) | 0.0528 (13) | 0.0068 (10) | 0.0018 (11) | −0.0062 (10) |
| O11 | 0.0555 (15) | 0.116 (2) | 0.089 (2) | −0.0077 (16) | 0.0063 (16) | 0.0173 (18) |
| O21 | 0.093 (2) | 0.0626 (17) | 0.105 (2) | −0.0126 (16) | −0.0017 (18) | 0.0161 (16) |
| O31 | 0.109 (3) | 0.145 (3) | 0.067 (2) | −0.022 (2) | −0.0035 (19) | −0.038 (2) |
| O41 | 0.088 (2) | 0.091 (2) | 0.094 (2) | 0.0057 (18) | −0.0299 (18) | 0.0290 (18) |
| Cl1 | 0.0575 (5) | 0.0638 (5) | 0.0447 (5) | −0.0077 (4) | −0.0079 (4) | 0.0055 (4) |
| Cu1 | 0.0458 (2) | 0.0370 (2) | 0.0352 (2) | 0.00416 (15) | 0.00067 (15) | 0.00081 (14) |
| C1—N1 | 1.344 (4) | C10—C11 | 1.434 (4) |
| C1—C2 | 1.375 (4) | C11—O3 | 1.226 (4) |
| C1—H1 | 0.93 | C11—O2 | 1.384 (4) |
| C2—C3 | 1.376 (5) | C12—C14 | 1.326 (5) |
| C2—H2 | 0.93 | C12—O2 | 1.365 (4) |
| C3—C4 | 1.358 (6) | C12—C13 | 1.495 (5) |
| C3—H3 | 0.93 | C13—H13A | 0.96 |
| C4—C5 | 1.385 (5) | C13—H13B | 0.96 |
| C4—H4 | 0.93 | C13—H13C | 0.96 |
| C5—N1 | 1.337 (4) | C14—C15 | 1.439 (4) |
| C5—H5 | 0.93 | C14—H14 | 0.93 |
| C6—N2 | 1.477 (4) | C15—O1 | 1.279 (4) |
| C6—C7 | 1.499 (5) | N1—Cu1 | 2.049 (2) |
| C6—H6A | 0.97 | N2—Cu1 | 2.001 (3) |
| C6—H6B | 0.97 | N2—H2A | 0.9 |
| C7—N3 | 1.469 (4) | N2—H2B | 0.9 |
| C7—H7A | 0.97 | N3—Cu1 | 1.974 (2) |
| C7—H7B | 0.97 | O1—Cu1 | 1.914 (2) |
| C8—C9 | 1.512 (4) | O3—Cu1i | 2.358 (2) |
| C8—H8A | 0.96 | O11—Cl1 | 1.431 (3) |
| C8—H8B | 0.96 | O21—Cl1 | 1.425 (3) |
| C8—H8C | 0.96 | O31—Cl1 | 1.407 (3) |
| C9—N3 | 1.288 (4) | O41—Cl1 | 1.417 (3) |
| C9—C10 | 1.469 (4) | Cu1—O3ii | 2.358 (2) |
| C10—C15 | 1.412 (4) | ||
| N1—C1—C2 | 123.2 (3) | O2—C12—C13 | 111.8 (3) |
| N1—C1—H1 | 118.4 | C12—C13—H13A | 109.5 |
| C2—C1—H1 | 118.4 | C12—C13—H13B | 109.5 |
| C1—C2—C3 | 119.2 (4) | H13A—C13—H13B | 109.5 |
| C1—C2—H2 | 120.4 | C12—C13—H13C | 109.5 |
| C3—C2—H2 | 120.4 | H13A—C13—H13C | 109.5 |
| C4—C3—C2 | 118.5 (3) | H13B—C13—H13C | 109.5 |
| C4—C3—H3 | 120.8 | C12—C14—C15 | 120.9 (3) |
| C2—C3—H3 | 120.8 | C12—C14—H14 | 119.5 |
| C3—C4—C5 | 119.5 (3) | C15—C14—H14 | 119.5 |
| C3—C4—H4 | 120.3 | O1—C15—C10 | 125.2 (3) |
| C5—C4—H4 | 120.3 | O1—C15—C14 | 116.7 (3) |
| N1—C5—C4 | 123.1 (3) | C10—C15—C14 | 118.1 (3) |
| N1—C5—H5 | 118.5 | C5—N1—C1 | 116.6 (3) |
| C4—C5—H5 | 118.5 | C5—N1—Cu1 | 123.7 (2) |
| N2—C6—C7 | 108.4 (3) | C1—N1—Cu1 | 119.7 (2) |
| N2—C6—H6A | 110 | C6—N2—Cu1 | 108.96 (19) |
| C7—C6—H6A | 110 | C6—N2—H2A | 109.9 |
| N2—C6—H6B | 110 | Cu1—N2—H2A | 109.9 |
| C7—C6—H6B | 110 | C6—N2—H2B | 109.9 |
| H6A—C6—H6B | 108.4 | Cu1—N2—H2B | 109.9 |
| N3—C7—C6 | 107.5 (3) | H2A—N2—H2B | 108.3 |
| N3—C7—H7A | 110.2 | C9—N3—C7 | 121.3 (3) |
| C6—C7—H7A | 110.2 | C9—N3—Cu1 | 128.7 (2) |
| N3—C7—H7B | 110.2 | C7—N3—Cu1 | 109.75 (19) |
| C6—C7—H7B | 110.2 | C15—O1—Cu1 | 124.85 (19) |
| H7A—C7—H7B | 108.5 | C12—O2—C11 | 122.0 (2) |
| C9—C8—H8A | 109.5 | C11—O3—Cu1i | 132.6 (2) |
| C9—C8—H8B | 109.5 | O31—Cl1—O41 | 110.9 (2) |
| H8A—C8—H8B | 109.5 | O31—Cl1—O21 | 109.4 (2) |
| C9—C8—H8C | 109.5 | O41—Cl1—O21 | 109.14 (19) |
| H8A—C8—H8C | 109.5 | O31—Cl1—O11 | 108.7 (2) |
| H8B—C8—H8C | 109.5 | O41—Cl1—O11 | 108.8 (2) |
| N3—C9—C10 | 119.8 (3) | O21—Cl1—O11 | 109.94 (19) |
| N3—C9—C8 | 121.1 (3) | O1—Cu1—N3 | 89.50 (9) |
| C10—C9—C8 | 119.0 (3) | O1—Cu1—N2 | 172.52 (11) |
| C15—C10—C11 | 119.0 (3) | N3—Cu1—N2 | 84.80 (10) |
| C15—C10—C9 | 121.8 (3) | O1—Cu1—N1 | 89.20 (9) |
| C11—C10—C9 | 119.2 (3) | N3—Cu1—N1 | 168.32 (10) |
| O3—C11—O2 | 114.0 (3) | N2—Cu1—N1 | 95.41 (10) |
| O3—C11—C10 | 127.6 (3) | O1—Cu1—O3ii | 95.50 (9) |
| O2—C11—C10 | 118.3 (3) | N3—Cu1—O3ii | 95.48 (9) |
| C14—C12—O2 | 121.4 (3) | N2—Cu1—O3ii | 89.86 (10) |
| C14—C12—C13 | 126.9 (3) | N1—Cu1—O3ii | 96.20 (9) |
| N1—C1—C2—C3 | 0.0 (5) | C6—C7—N3—Cu1 | 39.9 (3) |
| C1—C2—C3—C4 | 0.8 (6) | C10—C15—O1—Cu1 | −25.3 (4) |
| C2—C3—C4—C5 | −0.1 (6) | C14—C15—O1—Cu1 | 155.8 (2) |
| C3—C4—C5—N1 | −1.3 (6) | C14—C12—O2—C11 | −0.7 (5) |
| N2—C6—C7—N3 | −49.7 (4) | C13—C12—O2—C11 | 179.3 (3) |
| N3—C9—C10—C15 | 23.6 (4) | O3—C11—O2—C12 | 175.7 (3) |
| C8—C9—C10—C15 | −152.3 (3) | C10—C11—O2—C12 | −2.1 (4) |
| N3—C9—C10—C11 | −157.8 (3) | O2—C11—O3—Cu1i | 42.7 (4) |
| C8—C9—C10—C11 | 26.3 (4) | C10—C11—O3—Cu1i | −139.8 (3) |
| C15—C10—C11—O3 | −171.4 (3) | C15—O1—Cu1—N3 | 31.6 (3) |
| C9—C10—C11—O3 | 10.0 (5) | C15—O1—Cu1—N1 | −160.0 (3) |
| C15—C10—C11—O2 | 6.1 (4) | C15—O1—Cu1—O3ii | −63.8 (3) |
| C9—C10—C11—O2 | −172.5 (2) | C9—N3—Cu1—O1 | −16.1 (3) |
| O2—C12—C14—C15 | −0.6 (6) | C7—N3—Cu1—O1 | 158.9 (2) |
| C13—C12—C14—C15 | 179.5 (4) | C9—N3—Cu1—N2 | 168.7 (3) |
| C11—C10—C15—O1 | 173.9 (3) | C7—N3—Cu1—N2 | −16.2 (2) |
| C9—C10—C15—O1 | −7.5 (5) | C9—N3—Cu1—N1 | −99.8 (5) |
| C11—C10—C15—C14 | −7.2 (4) | C7—N3—Cu1—N1 | 75.3 (6) |
| C9—C10—C15—C14 | 171.3 (3) | C9—N3—Cu1—O3ii | 79.4 (3) |
| C12—C14—C15—O1 | −176.5 (3) | C7—N3—Cu1—O3ii | −105.6 (2) |
| C12—C14—C15—C10 | 4.6 (5) | C6—N2—Cu1—N3 | −11.2 (2) |
| C4—C5—N1—C1 | 2.0 (5) | C6—N2—Cu1—N1 | −179.5 (2) |
| C4—C5—N1—Cu1 | −175.0 (3) | C6—N2—Cu1—O3ii | 84.3 (2) |
| C2—C1—N1—C5 | −1.3 (5) | C5—N1—Cu1—O1 | −162.4 (3) |
| C2—C1—N1—Cu1 | 175.8 (3) | C1—N1—Cu1—O1 | 20.7 (2) |
| C7—C6—N2—Cu1 | 36.0 (3) | C5—N1—Cu1—N3 | −78.7 (6) |
| C10—C9—N3—C7 | 179.1 (3) | C1—N1—Cu1—N3 | 104.4 (5) |
| C8—C9—N3—C7 | −5.1 (4) | C5—N1—Cu1—N2 | 11.7 (3) |
| C10—C9—N3—Cu1 | −6.4 (4) | C1—N1—Cu1—N2 | −165.2 (2) |
| C8—C9—N3—Cu1 | 169.4 (2) | C5—N1—Cu1—O3ii | 102.2 (3) |
| C6—C7—N3—C9 | −144.6 (3) | C1—N1—Cu1—O3ii | −74.7 (2) |
| H··· | ||||
| N2—H2A···O11iii | 0.90 | 2.34 | 3.182 (4) | 156. |
| N2—H2A···O41iii | 0.90 | 2.57 | 3.338 (4) | 144. |
| N2—H2B···O31iv | 0.90 | 2.31 | 3.142 (4) | 153. |
| C1—H1···O1 | 0.93 | 2.29 | 2.842 (4) | 118. |
| C5—H5···N2 | 0.93 | 2.59 | 3.121 (4) | 117. |
| C8—H8B···O3 | 0.96 | 2.39 | 2.809 (4) | 106. |
Selected bond lengths (Å)
| N1—Cu1 | 2.049 (2) |
| N2—Cu1 | 2.001 (3) |
| N3—Cu1 | 1.974 (2) |
| O1—Cu1 | 1.914 (2) |
| O3—Cu1i | 2.358 (2) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.90 | 2.34 | 3.182 (4) | 156 |
| N2—H2 | 0.90 | 2.57 | 3.338 (4) | 144 |
| N2—H2 | 0.90 | 2.31 | 3.142 (4) | 153 |
| C1—H1⋯O1 | 0.93 | 2.29 | 2.842 (4) | 118 |
| C5—H5⋯N2 | 0.93 | 2.59 | 3.121 (4) | 117 |
| C8—H8 | 0.96 | 2.39 | 2.809 (4) | 106 |
Symmetry codes: (ii) ; (iii) .