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Literature DB >> 23281134

RNA-mediated genome rearrangement: hypotheses and evidence.

Wenwen Fang¹, Laura F Landweber.

Abstract

Entities: Chemical Disease Gene Species

Mesh：

Substances：

Year: 2012 PMID： 23281134 PMCID： PMC3821980 DOI： 10.1002/bies.201200140

Source DB: PubMed Journal: Bioessays ISSN： 0265-9247 Impact factor: 4.345

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30 in total

1. Permuted tRNA genes expressed via a circular RNA intermediate in Cyanidioschyzon merolae.

Authors: Akiko Soma; Akinori Onodera; Junichi Sugahara; Akio Kanai; Nozomu Yachie; Masaru Tomita; Fujio Kawamura; Yasuhiko Sekine
Journal: Science Date: 2007-10-19 Impact factor: 47.728

2. Programmed DNA deletion as an RNA-guided system of genome defense.

Authors: Meng-Chao Yao; Patrick Fuller; Xiaohui Xi
Journal: Science Date: 2003-06-06 Impact factor: 47.728

3. The diminution of Heterochromatic chromosomal segments in Cyclops (Crustacea, Copepoda).

Authors: S Beermann
Journal: Chromosoma Date: 1977-04-20 Impact factor: 4.316

Review 4. The DNA of ciliated protozoa.

Authors: D M Prescott
Journal: Microbiol Rev Date: 1994-06

5. Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena.

Authors: Kazufumi Mochizuki; Noah A Fine; Toshitaka Fujisawa; Martin A Gorovsky
Journal: Cell Date: 2002-09-20 Impact factor: 41.582

6. RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena.

Authors: Yifan Liu; Sean D Taverna; Tara L Muratore; Jeffrey Shabanowitz; Donald F Hunt; C David Allis
Journal: Genes Dev Date: 2007-06-15 Impact factor: 11.361

7. RAG2 PHD finger couples histone H3 lysine 4 trimethylation with V(D)J recombination.

Authors: Adam G W Matthews; Alex J Kuo; Santiago Ramón-Maiques; Sunmi Han; Karen S Champagne; Dmitri Ivanov; Mercedes Gallardo; Dylan Carney; Peggie Cheung; David N Ciccone; Kay L Walter; Paul J Utz; Yang Shi; Tatiana G Kutateladze; Wei Yang; Or Gozani; Marjorie A Oettinger
Journal: Nature Date: 2007-11-21 Impact factor: 49.962

8. Chromosome elimination in the Japanese hagfish, Eptatretus burgeri (Agnatha, Cyclostomata).

Authors: S Kohno; Y Nakai; S Satoh; M Yoshida; H Kobayashi
Journal: Cytogenet Cell Genet Date: 1986

Review 9. Chromatin diminution in nematode development.

Authors: H Tobler; A Etter; F Müller
Journal: Trends Genet Date: 1992-12 Impact factor: 11.639

10. RNA-templated DNA repair.

Authors: Francesca Storici; Katarzyna Bebenek; Thomas A Kunkel; Dmitry A Gordenin; Michael A Resnick
Journal: Nature Date: 2007-04-11 Impact factor: 49.962

10 in total

Review 1. Origin, structure and function of millions of chromosomes present in the macronucleus of unicellular eukaryotic ciliate, Oxytricha trifallax: a model organism for transgenerationally programmed genome rearrangements.

Authors: Sushil Kumar; Renu Kumari
Journal: J Genet Date: 2015-06 Impact factor: 1.166

RNA-mediated genome rearrangement: hypotheses and evidence.

1. Permuted tRNA genes expressed via a circular RNA intermediate in Cyanidioschyzon merolae.

2. Programmed DNA deletion as an RNA-guided system of genome defense.

3. The diminution of Heterochromatic chromosomal segments in Cyclops (Crustacea, Copepoda).

Review 4. The DNA of ciliated protozoa.

5. Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena.

6. RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena.

7. RAG2 PHD finger couples histone H3 lysine 4 trimethylation with V(D)J recombination.

8. Chromosome elimination in the Japanese hagfish, Eptatretus burgeri (Agnatha, Cyclostomata).

Review 9. Chromatin diminution in nematode development.

10. RNA-templated DNA repair.

Review 1. Origin, structure and function of millions of chromosomes present in the macronucleus of unicellular eukaryotic ciliate, Oxytricha trifallax: a model organism for transgenerationally programmed genome rearrangements.

2. RNA-mediated gene fusion in mammalian cells.

Review 3. Chimeric RNAs Discovered by RNA Sequencing and Their Roles in Cancer and Rare Genetic Diseases.

4. Transcript RNA supports precise repair of its own DNA gene.

5. Interaction-based evolution: how natural selection and nonrandom mutation work together.

6. Recurrent loss of specific introns during angiosperm evolution.

7. Highly diversified expansions shaped the evolution of membrane bound proteins in metazoans.

Review 8. Chimeric RNA in Cancer and Stem Cell Differentiation.

Review 9. Experimental Evolution in Tetrahymena.

10. Chromosome fusions triggered by noncoding RNA.