Literature DB >> 23281099

Effect of molecular crowding on the temperature-pressure stability diagram of ribonuclease A.

Yong Zhai1, Roland Winter.   

Abstract

FT-IR spectroscopic and thermodynamic measurements were designed to explore the effect of a macromolecular crowder, dextran, on the temperature and pressure-dependent phase diagram of the protein Ribonuclease A (RNase A), and we compare the experimental data with approximate theoretical predictions based on configuration entropy. Exploring the crowding effect on the pressure-induced unfolding of proteins provides insight in protein stability and folding under cell-like dense conditions, since pressure is a fundamental thermodynamic variable linked to molecular volume. Moreover, these studies are of relevance for understanding protein stability in deep-sea organisms, which have to cope with pressures in the kbar range. We found that not only temperature-induced equilibrium unfolding of RNase A, but also unfolding induced by pressure is markedly prohibited in the crowded dextran solutions, suggesting that crowded environments such as those found intracellularly, will also oppress high-pressure protein unfolding. The FT-IR spectroscopic measurements revealed a marked increase in unfolding pressure of 2 kbar in the presence of 30 wt % dextran. Whereas the structural changes upon thermal unfolding of the protein are not significantly influenced in the presence of the crowding agent, through stabilization by dextran the pressure-unfolded state of the protein retains more ordered secondary structure elements, which seems to be a manifestation of the entropic destabilization of the unfolded state by crowding.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23281099     DOI: 10.1002/cphc.201200767

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  6 in total

1.  Thermal stability of lysozyme as a function of ion concentration: a reappraisal of the relationship between the Hofmeister series and protein stability.

Authors:  Jordan W Bye; Robert J Falconer
Journal:  Protein Sci       Date:  2013-09-20       Impact factor: 6.725

2.  Exploring the stability limits of actin and its suprastructures.

Authors:  Christopher Rosin; Mirko Erlkamp; Julian von der Ecken; Stefan Raunser; Roland Winter
Journal:  Biophys J       Date:  2014-12-16       Impact factor: 4.033

3.  Analysis of the size dependence of macromolecular crowding shows that smaller is better.

Authors:  Kim A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-15       Impact factor: 11.205

4.  A Different hIAPP Polymorph Is Observed in Human Serum Than in Aqueous Buffer: Demonstration of a New Method for Studying Amyloid Fibril Structure Using Infrared Spectroscopy.

Authors:  Caitlyn R Fields; Sidney S Dicke; Megan K Petti; Martin T Zanni; Justin P Lomont
Journal:  J Phys Chem Lett       Date:  2020-07-24       Impact factor: 6.475

5.  How Osmolytes Counteract Pressure Denaturation on a Molecular Scale.

Authors:  Seishi Shimizu; Paul E Smith
Journal:  Chemphyschem       Date:  2017-07-05       Impact factor: 3.102

Review 6.  What macromolecular crowding can do to a protein.

Authors:  Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Int J Mol Sci       Date:  2014-12-12       Impact factor: 5.923

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.