Literature DB >> 23280178

The involvement of repetitive sequences in the remodelling of karyotypes: the Phodopus genomes (Rodentia, Cricetidae).

A Paço1, R Chaves, A Vieira-da-Silva, F Adega.   

Abstract

In this work we characterize the Phodopus roborovskii and Phodopus sungorus karyotypes, describing the constitutive heterochromatin and the telomeric repeats distribution in these chromosomes. In the two species, (peri)centromeric, interstitial and (sub)telomeric C-bands were revealed, presenting a very high colocalization with evolutionary breakpoint regions identified in these karyotypes. Also both species present telomeric sequences located interstitially (ITS), as short ITS blocks or as large ITS blocks, mainly at the (peri)centromeric heterochromatic regions. The number and degree of ITSs amplification varies greatly in the two hamsters, indicating independent evolutionary events of these repeats in each genome. The combination of the data provided interesting insights about the genome organization of these hamster species, also allowing establishing evolutionary considerations on their chromosomes. The obtained results clearly suggest an involvement of the repetitive genomic fraction in the reshaping of P. roborovskii and P. sungorus karyotypes.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23280178     DOI: 10.1016/j.micron.2012.11.010

Source DB:  PubMed          Journal:  Micron        ISSN: 0968-4328            Impact factor:   2.251


  13 in total

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2.  LINE-1 distribution in six rodent genomes follow a species-specific pattern.

Authors:  A Vieira-da-Silva; F Adega; H Guedes-Pinto; R Chaves
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3.  Karyotype variability in six Amazonian species of the family Curimatidae (Characiformes) revealed by repetitive sequence mapping.

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Journal:  Genet Mol Biol       Date:  2022-06-27       Impact factor: 2.087

4.  The puzzling character of repetitive DNA in Phodopus genomes (Cricetidae, Rodentia).

Authors:  Ana Paço; Filomena Adega; Nevenka Meštrović; Miroslav Plohl; Raquel Chaves
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

5.  Evolutionary story of a satellite DNA from Phodopus sungorus (Rodentia, Cricetidae).

Authors:  Ana Paço; Filomena Adega; Nevenka Meštrović; Miroslav Plohl; Raquel Chaves
Journal:  Genome Biol Evol       Date:  2014-10-21       Impact factor: 3.416

6.  Comparative cytogenetics of tree frogs of the Dendropsophus marmoratus (Laurenti, 1768) group: conserved karyotypes and interstitial telomeric sequences.

Authors:  Lívia S R Teixeira; Karin Regina Seger; Cíntia Pelegrineti Targueta; Victor G Dill Orrico; Luciana Bolsoni Lourenço
Journal:  Comp Cytogenet       Date:  2016-12-14       Impact factor: 1.800

7.  Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae.

Authors:  Ana Escudeiro; Filomena Adega; Terence J Robinson; John S Heslop-Harrison; Raquel Chaves
Journal:  Genome Biol Evol       Date:  2019-04-01       Impact factor: 3.416

8.  Integration of molecular cytogenetics, dated molecular phylogeny, and model-based predictions to understand the extreme chromosome reorganization in the Neotropical genus Tonatia (Chiroptera: Phyllostomidae).

Authors:  Cibele G Sotero-Caio; Marianne Volleth; Federico G Hoffmann; LuAnn Scott; Holly A Wichman; Fengtang Yang; Robert J Baker
Journal:  BMC Evol Biol       Date:  2015-10-06       Impact factor: 3.260

9.  FA-SAT Is an Old Satellite DNA Frozen in Several Bilateria Genomes.

Authors:  Raquel Chaves; Daniela Ferreira; Ana Mendes-da-Silva; Susana Meles; Filomena Adega
Journal:  Genome Biol Evol       Date:  2017-11-01       Impact factor: 3.416

10.  Non-random distribution of microsatellite motifs and (TTAGGG)n repeats in the monkey frog Pithecopus rusticus (Anura, Phyllomedusidae) karyotype.

Authors:  Julia R Ernetti; Camilla B Gazolla; Shirlei M Recco-Pimentel; Elaine M Luca; Daniel P Bruschi
Journal:  Genet Mol Biol       Date:  2020-01-13       Impact factor: 1.771

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