Literature DB >> 23273660

Engineering nanoscale protein compartments for synthetic organelles.

Edward Y Kim1, Danielle Tullman-Ercek.   

Abstract

Advances in metabolic engineering have given rise to the biological production of novel fuels and chemicals, but yields are often low without significant optimization. One generalizable solution is to create a specialized organelle for the sequestration of engineered metabolic pathways. Bacterial microcompartments are an excellent scaffold for such an organelle. These compartments consist of a porous protein shell that encapsulates enzymes. To repurpose these structures, researchers have begun to determine how the protein shell is assembled, how pores may be used to control small molecule transport across the protein shell, and how to target heterologous enzymes to the compartment interior. With these advances, it will soon be possible to use engineered forms of these protein shells to create designer organelles.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23273660     DOI: 10.1016/j.copbio.2012.11.012

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  29 in total

1.  Genetic Characterization of a Glycyl Radical Microcompartment Used for 1,2-Propanediol Fermentation by Uropathogenic Escherichia coli CFT073.

Authors:  Alex P Lundin; Katie L Stewart; Andrew M Stewart; Taylor I Herring; Chiranjit Chowdhury; Thomas A Bobik
Journal:  J Bacteriol       Date:  2020-04-09       Impact factor: 3.490

2.  De novo design of signal sequences to localize cargo to the 1,2-propanediol utilization microcompartment.

Authors:  Christopher M Jakobson; Marilyn F Slininger Lee; Danielle Tullman-Ercek
Journal:  Protein Sci       Date:  2017-04-17       Impact factor: 6.725

3.  The N Terminus of the PduB Protein Binds the Protein Shell of the Pdu Microcompartment to Its Enzymatic Core.

Authors:  Brent P Lehman; Chiranjit Chowdhury; Thomas A Bobik
Journal:  J Bacteriol       Date:  2017-03-28       Impact factor: 3.490

4.  The effects of time, temperature, and pH on the stability of PDU bacterial microcompartments.

Authors:  Edward Y Kim; Marilyn F Slininger; Danielle Tullman-Ercek
Journal:  Protein Sci       Date:  2014-08-12       Impact factor: 6.725

Review 5.  Diverse bacterial microcompartment organelles.

Authors:  Chiranjit Chowdhury; Sharmistha Sinha; Sunny Chun; Todd O Yeates; Thomas A Bobik
Journal:  Microbiol Mol Biol Rev       Date:  2014-09       Impact factor: 11.056

Review 6.  Substrate channelling as an approach to cascade reactions.

Authors:  Ian Wheeldon; Shelley D Minteer; Scott Banta; Scott Calabrese Barton; Plamen Atanassov; Matthew Sigman
Journal:  Nat Chem       Date:  2016-04       Impact factor: 24.427

Review 7.  Enzymatic reactions in confined environments.

Authors:  Andreas Küchler; Makoto Yoshimoto; Sandra Luginbühl; Fabio Mavelli; Peter Walde
Journal:  Nat Nanotechnol       Date:  2016-05-05       Impact factor: 39.213

Review 8.  Prokaryotic Organelles: Bacterial Microcompartments in E. coli and Salmonella.

Authors:  Katie L Stewart; Andrew M Stewart; Thomas A Bobik
Journal:  EcoSal Plus       Date:  2020-10

9.  Molecular Dynamics Simulations of Selective Metabolite Transport across the Propanediol Bacterial Microcompartment Shell.

Authors:  Jiyong Park; Sunny Chun; Thomas A Bobik; Kendall N Houk; Todd O Yeates
Journal:  J Phys Chem B       Date:  2017-08-22       Impact factor: 2.991

10.  A Bacterial Microcompartment Is Used for Choline Fermentation by Escherichia coli 536.

Authors:  Taylor I Herring; Tiffany N Harris; Chiranjit Chowdhury; Sujit Kumar Mohanty; Thomas A Bobik
Journal:  J Bacteriol       Date:  2018-04-24       Impact factor: 3.490

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