Literature DB >> 23267471

Efficient and automatic calculation of optical band shapes and resonance Raman spectra for larger molecules within the independent mode displaced harmonic oscillator model.

Taras Petrenko1, Frank Neese.   

Abstract

In this work, an improved method for the efficient automatic simulation of optical band shapes and resonance Raman (rR) intensities within the "independent mode displaced harmonic oscillator" is described. Despite the relative simplicity of this model, it is able to account for the intensity distribution in absorption (ABS), fluorescence, and rR spectra corresponding to strongly dipole allowed electronic transitions with high accuracy. In order to include temperature-induced effects, we propose a simple extension of the time dependent wavepacket formalism developed by Heller which enables one to derive analytical expressions for the intensities of hot bands in ABS and rR spectra from the dependence of the wavepacket evolution on its initial coordinate. We have also greatly optimized the computational procedures for numerical integration of complicated oscillating integrals. This is important for efficient simulations of higher-order rR spectra and excitation profiles, as well as for the fitting of experimental spectra of large molecules. In particular, the multimode damping mechanism is taken into account for efficient reduction of the upper time limit in the numerical integration. Excited state energy gradient as well as excited state geometry optimization calculations are employed in order to determine excited state dimensionless normal coordinate displacements. The gradient techniques are highly cost-effective provided that analytical excited state derivatives with respect to nuclear displacements are available. Through comparison with experimental spectra of some representative molecules, we illustrate that the gradient techniques can even outperform the geometry optimization method if the harmonic approximation becomes inadequate.

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Year:  2012        PMID: 23267471     DOI: 10.1063/1.4771959

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  10 in total

1.  The iron-sulfur core in Rieske proteins is not symmetric.

Authors:  Md Ehesan Ali; Nisanth N Nair; Marius Retegan; Frank Neese; Volker Staemmler; Dominik Marx
Journal:  J Biol Inorg Chem       Date:  2014-08-24       Impact factor: 3.358

2.  Experimental and DFT Investigations Reveal the Influence of the Outer Coordination Sphere on the Vibrational Spectra of Nickel-Substituted Rubredoxin, a Model Hydrogenase Enzyme.

Authors:  Jeffrey W Slater; Sean C Marguet; Sabrina L Cirino; Pearson T Maugeri; Hannah S Shafaat
Journal:  Inorg Chem       Date:  2017-03-21       Impact factor: 5.165

3.  General Time Dependent Approach to Vibronic Spectroscopy Including Franck-Condon, Herzberg-Teller, and Duschinsky Effects.

Authors:  Alberto Baiardi; Julien Bloino; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2013-08-27       Impact factor: 6.006

4.  Virtual eyes for technology and cultural heritage: toward computational strategy for new and old indigo-based dyes.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Camille Latouche; Andrea Pasti
Journal:  Theor Chem Acc       Date:  2015-11-11       Impact factor: 1.702

5.  Multiconfigurational Effects in Theoretical Resonance Raman Spectra.

Authors:  Yingjin Ma; Stefan Knecht; Markus Reiher
Journal:  Chemphyschem       Date:  2017-01-16       Impact factor: 3.102

6.  Low-Energy Electronic Excitations of N-Substituted Heteroacene Molecules: Matrix Isolation Spectroscopy in Concert with Quantum-Chemical Calculations.

Authors:  Jean Thusek; Marvin Hoffmann; Olaf Hübner; Olena Tverskoy; Uwe H F Bunz; Andreas Dreuw; Hans-Jörg Himmel
Journal:  Chemistry       Date:  2019-10-30       Impact factor: 5.236

7.  A robust and effective time-independent route to the calculation of Resonance Raman spectra of large molecules in condensed phases with the inclusion of Duschinsky, Herzberg-Teller, anharmonic, and environmental effects.

Authors:  Franco Egidi; Julien Bloino; Chiara Cappelli; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2014-01-14       Impact factor: 6.006

8.  Magnetic circular dichroism and computational study of mononuclear and dinuclear iron(IV) complexes.

Authors:  Shengfa Ye; Genqiang Xue; Itana Krivokapic; Taras Petrenko; Eckhard Bill; Lawrence Que; Frank Neese
Journal:  Chem Sci       Date:  2015-02-26       Impact factor: 9.825

9.  A combined experimental and theoretical spectroscopic protocol for determination of the structure of heterogeneous catalysts: developing the information content of the resonance Raman spectra of M1 MoVO x.

Authors:  Adam Kubas; Johannes Noak; Annette Trunschke; Robert Schlögl; Frank Neese; Dimitrios Maganas
Journal:  Chem Sci       Date:  2017-06-30       Impact factor: 9.825

10.  Nonempirical Simulations of Inhomogeneous Broadening of Electronic Transitions in Solution: Predicting Band Shapes in One- and Two-Photon Absorption Spectra of Chalcones.

Authors:  Joanna Bednarska; Robert Zaleśny; Guangjun Tian; Natarajan Arul Murugan; Hans Ågren; Wojciech Bartkowiak
Journal:  Molecules       Date:  2017-09-30       Impact factor: 4.411

  10 in total

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