Literature DB >> 23246357

Guidance on the development and validation of diagnostic tests that depend on nucleic acid amplification and detection.

Nick Saunders1, Maria Zambon, Ian Sharp, Ruhi Siddiqui, Alison Bermingham, Joanna Ellis, Barry Vipond, Andrew Sails, Jacob Moran-Gilad, Peter Marsh, Malcolm Guiver.   

Abstract

In order to comply with national and international clinical laboratory accreditation standards (e.g. the ISO 15189, Clinical Pathology Accreditation standards) and with the joint code of practice for research, there must be a method of assessing that test methods are "fit for purpose". This document gives guidance on development and describes how a validation file is produced. A test method may be a commercial kit, an in-house assay or reagent or a set of reagents bought separately and used to prepare an in house assay. A validation file is needed for both current and new test procedures. The file may refer to data recorded in workbooks, papers and reports. Modifications to assays (including commercially available assays) necessitate either an update to the validation file or creation of a new file. This paper is intended to provide a generic framework for in-house assay development and validation of new nucleic acid amplification assays including real-time polymerase chain reaction (PCR).
Copyright © 2012 Elsevier B.V. All rights reserved.

Mesh:

Year:  2012        PMID: 23246357     DOI: 10.1016/j.jcv.2012.11.013

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  12 in total

1.  Design and validation of a qPCR assay for accurate detection and initial serogrouping of Legionella pneumophila in clinical specimens by the ESCMID Study Group for Legionella Infections (ESGLI).

Authors:  M Mentasti; D Kese; F Echahidi; S A Uldum; B Afshar; S David; J Mrazek; R De Mendonça; T G Harrison; V J Chalker
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2015-04-08       Impact factor: 3.267

2.  Detection and Characterization of Diphtheria Toxin Gene-Bearing Corynebacterium Species through a New Real-Time PCR Assay.

Authors:  Margaret M Williams; Jessica L Waller; Janessa S Aneke; Michael R Weigand; Maureen H Diaz; Katherine E Bowden; Ashley K Simon; Yanhui Peng; Lingzi Xiaoli; Pamela K Cassiday; Jonas Winchell; M Lucia Tondella
Journal:  J Clin Microbiol       Date:  2020-09-22       Impact factor: 5.948

3.  A reliable method for the detection of BRCA1 and BRCA2 mutations in fixed tumour tissue utilising multiplex PCR-based targeted next generation sequencing.

Authors:  Gillian Ellison; Shuwen Huang; Hedley Carr; Andrew Wallace; Miika Ahdesmaki; Sanjeev Bhaskar; John Mills
Journal:  BMC Clin Pathol       Date:  2015-03-24

4.  Development of two real-time multiplex PCR assays for the detection and quantification of eight key bacterial pathogens in lower respiratory tract infections.

Authors:  N J Gadsby; M P McHugh; C D Russell; H Mark; A Conway Morris; I F Laurenson; A T Hill; K E Templeton
Journal:  Clin Microbiol Infect       Date:  2015-05-14       Impact factor: 8.067

5.  High-throughput ultrasensitive molecular techniques for quantifying low-density malaria parasitemias.

Authors:  Mallika Imwong; Sarun Hanchana; Benoit Malleret; Laurent Rénia; Nicholas P J Day; Arjen Dondorp; Francois Nosten; Georges Snounou; Nicholas J White
Journal:  J Clin Microbiol       Date:  2014-07-02       Impact factor: 5.948

6.  A quality control program within a clinical trial Consortium for PCR protocols to detect Plasmodium species.

Authors:  Steve M Taylor; Alfredo Mayor; Ghyslain Mombo-Ngoma; Hilaire M Kenguele; Smaïla Ouédraogo; Nicaise Tuikue Ndam; Happy Mkali; Grace Mwangoka; Neena Valecha; Jai Prakash Narayan Singh; Martha A Clark; Jaco J Verweij; Ayola Akim Adegnika; Carlo Severini; Michela Menegon; Eusebio Macete; Clara Menendez; Pau Cisteró; Fanta Njie; Muna Affara; Kephas Otieno; Simon Kariuki; Feiko O ter Kuile; Steven R Meshnick
Journal:  J Clin Microbiol       Date:  2014-04-16       Impact factor: 5.948

Review 7.  Guidance for laboratories performing molecular pathology for cancer patients.

Authors:  Ian A Cree; Zandra Deans; Marjolijn J L Ligtenberg; Nicola Normanno; Anders Edsjö; Etienne Rouleau; Francesc Solé; Erik Thunnissen; Wim Timens; Ed Schuuring; Elisabeth Dequeker; Samuel Murray; Manfred Dietel; Patricia Groenen; J Han Van Krieken
Journal:  J Clin Pathol       Date:  2014-07-10       Impact factor: 3.411

Review 8.  Circulating free DNA in the era of precision oncology: Pre- and post-analytical concerns.

Authors:  Jun-Liang Lu; Zhi-Yong Liang
Journal:  Chronic Dis Transl Med       Date:  2016-12-22

9.  Application of whole genome data for in silico evaluation of primers and probes routinely employed for the detection of viral species by RT-qPCR using dengue virus as a case study.

Authors:  Kevin Vanneste; Linda Garlant; Sylvia Broeders; Steven Van Gucht; Nancy H Roosens
Journal:  BMC Bioinformatics       Date:  2018-09-04       Impact factor: 3.169

10.  A new multiplex RT-qPCR method for the simultaneous detection and discrimination of Zika and chikungunya viruses.

Authors:  Sylvia Broeders; Linda Garlant; Marie-Alice Fraiture; Els Vandermassen; Vanessa Suin; Jessica Vanhomwegen; Myrielle Dupont-Rouzeyrol; Dominique Rousset; Steven Van Gucht; Nancy Roosens
Journal:  Int J Infect Dis       Date:  2019-12-26       Impact factor: 3.623

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