Literature DB >> 2323560

Analysis of the inheritance, selection and evolution of growth trajectories.

M Kirkpatrick1, D Lofsvold, M Bulmer.   

Abstract

We present methods for estimating the parameters of inheritance and selection that appear in a quantitative genetic model for the evolution growth trajectories and other "infinite-dimensional" traits that we recently introduced. Two methods for estimating the additive genetic covariance function are developed, a "full" model that fully fits the data and a "reduced" model that generates a smoothed estimate consistent with the sampling errors in the data. By decomposing the covariance function into its eigenvalues and eigenfunctions, it is possible to identify potential evolutionary changes in the population's mean growth trajectory for which there is (and those for which there is not) genetic variation. Algorithms for estimating these quantities, their confidence intervals, and for testing hypotheses about them are developed. These techniques are illustrated by an analysis of early growth in mice. Compatible methods for estimating the selection gradient function acting on growth trajectories in natural or domesticated populations are presented. We show how the estimates for the additive genetic covariance function and the selection gradient function can be used to predict the evolutionary change in a population's mean growth trajectory.

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Mesh:

Year:  1990        PMID: 2323560      PMCID: PMC1203988     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  3 in total

Review 1.  Evolutionary quantitative genetics: how little do we know?

Authors:  N H Barton; M Turelli
Journal:  Annu Rev Genet       Date:  1989       Impact factor: 16.830

2.  A quantitative genetic model for growth, shape, reaction norms, and other infinite-dimensional characters.

Authors:  M Kirkpatrick; N Heckman
Journal:  J Math Biol       Date:  1989       Impact factor: 2.259

3.  The inheritance of growth and form in the mouse. IV. Changes in the variance components of weight, tail length and tail width during growth.

Authors:  J G Herbert; J F Kidwell; H B Chase
Journal:  Growth       Date:  1979-03
  3 in total
  73 in total

1.  The genetic analysis of age-dependent traits: modeling the character process.

Authors:  S D Pletcher; C J Geyer
Journal:  Genetics       Date:  1999-10       Impact factor: 4.562

2.  Statistical models for estimating the genetic basis of repeated measures and other function-valued traits.

Authors:  F Jaffrézic; S D Pletcher
Journal:  Genetics       Date:  2000-10       Impact factor: 4.562

3.  Functional mapping of quantitative trait loci underlying the character process: a theoretical framework.

Authors:  Chang-Xing Ma; George Casella; Rongling Wu
Journal:  Genetics       Date:  2002-08       Impact factor: 4.562

4.  A likelihood approach for mapping growth trajectories using dominant markers in a phase-unknown full-sib family.

Authors:  C-X Ma; M Lin; R C Littell; T Yin; R Wu
Journal:  Theor Appl Genet       Date:  2003-10-28       Impact factor: 5.699

5.  The genetic covariance among clinal environments after adaptation to an environmental gradient in Drosophila serrata.

Authors:  Carla M Sgrò; Mark W Blows
Journal:  Genetics       Date:  2004-07       Impact factor: 4.562

6.  A general framework for analyzing the genetic architecture of developmental characteristics.

Authors:  Rongling Wu; Chang-Xing Ma; Min Lin; George Casella
Journal:  Genetics       Date:  2004-03       Impact factor: 4.562

7.  Natural selection on light response curve parameters in the herbaceous annual, Impatiens capensis.

Authors:  M Shane Heschel; John R Stinchcombe; Kent E Holsinger; Johanna Schmitt
Journal:  Oecologia       Date:  2004-04-09       Impact factor: 3.225

8.  Better estimates of genetic covariance matrices by "bending" using penalized maximum likelihood.

Authors:  Karin Meyer; Mark Kirkpatrick
Journal:  Genetics       Date:  2010-05-03       Impact factor: 4.562

9.  Bayesian analysis for genetic architecture of dynamic traits.

Authors:  L Min; R Yang; X Wang; B Wang
Journal:  Heredity (Edinb)       Date:  2010-03-24       Impact factor: 3.821

Review 10.  Complex Trait Prediction from Genome Data: Contrasting EBV in Livestock to PRS in Humans: Genomic Prediction.

Authors:  Naomi R Wray; Kathryn E Kemper; Benjamin J Hayes; Michael E Goddard; Peter M Visscher
Journal:  Genetics       Date:  2019-04       Impact factor: 4.562

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