Literature DB >> 23229911

Solution structures of Mycobacterium tuberculosis thioredoxin C and models of intact thioredoxin system suggest new approaches to inhibitor and drug design.

Andrew L Olson1, Terrence S Neumann, Sheng Cai, Daniel S Sem.   

Abstract

Here, we report the NMR solution structures of Mycobacterium tuberculosis (M. tuberculosis) thioredoxin C in both oxidized and reduced states, with discussion of structural changes that occur in going between redox states. The NMR solution structure of the oxidized TrxC corresponds closely to that of the crystal structure, except in the C-terminal region. It appears that crystal packing effects have caused an artifactual shift in the α4 helix in the previously reported crystal structure, compared with the solution structure. On the basis of these TrxC structures, chemical shift mapping, a previously reported crystal structure of the M. tuberculosis thioredoxin reductase (not bound to a Trx) and structures for intermediates in the E. coli thioredoxin catalytic cycle, we have modeled the complete M. tuberculosis thioredoxin system for the various steps in the catalytic cycle. These structures and models reveal pockets at the TrxR/TrxC interface in various steps in the catalytic cycle, which can be targeted in the design of uncompetitive inhibitors as potential anti-mycobacterial agents, or as chemical genetic probes of function.
Copyright © 2013 Wiley Periodicals, Inc.

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Year:  2013        PMID: 23229911      PMCID: PMC3620657          DOI: 10.1002/prot.24228

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  39 in total

Review 1.  Clinical practice. Latent tuberculosis infection.

Authors:  Robert M Jasmer; Payam Nahid; Philip C Hopewell
Journal:  N Engl J Med       Date:  2002-12-05       Impact factor: 91.245

2.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

3.  Interactions of glutaredoxins, ribonucleotide reductase, and components of the DNA replication system of Escherichia coli.

Authors:  Ron Ortenberg; Stéphanie Gon; Amir Porat; Jon Beckwith
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-27       Impact factor: 11.205

4.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

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Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

5.  Torsion angle dynamics for NMR structure calculation with the new program DYANA.

Authors:  P Güntert; C Mumenthaler; K Wüthrich
Journal:  J Mol Biol       Date:  1997-10-17       Impact factor: 5.469

Review 6.  Thioredoxin reductase two modes of catalysis have evolved.

Authors:  C H Williams; L D Arscott; S Müller; B W Lennon; M L Ludwig; P F Wang; D M Veine; K Becker; R H Schirmer
Journal:  Eur J Biochem       Date:  2000-10

7.  Solution structure of thioredoxin h1 from Arabidopsis thaliana.

Authors:  Francis C Peterson; Betsy L Lytle; Sujatha Sampath; Dmitriy Vinarov; Ejan Tyler; Mark Shahan; John L Markley; Brian F Volkman
Journal:  Protein Sci       Date:  2005-06-29       Impact factor: 6.725

8.  Formation and properties of mixed disulfides between thioredoxin reductase from Escherichia coli and thioredoxin: evidence that cysteine-138 functions to initiate dithiol-disulfide interchange and to accept the reducing equivalent from reduced flavin.

Authors:  D M Veine; S B Mulrooney; P F Wang; C H Williams
Journal:  Protein Sci       Date:  1998-06       Impact factor: 6.725

9.  High-resolution solution structures of oxidized and reduced Escherichia coli thioredoxin.

Authors:  M F Jeng; A P Campbell; T Begley; A Holmgren; D A Case; P E Wright; H J Dyson
Journal:  Structure       Date:  1994-09-15       Impact factor: 5.006

10.  Functional studies of multiple thioredoxins from Mycobacterium tuberculosis.

Authors:  Mohd Akif; Garima Khare; Anil K Tyagi; Shekhar C Mande; Abhijit A Sardesai
Journal:  J Bacteriol       Date:  2008-08-22       Impact factor: 3.490

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  5 in total

1.  Solution NMR structures of oxidized and reduced Ehrlichia chaffeensis thioredoxin: NMR-invisible structure owing to backbone dynamics.

Authors:  Garry W Buchko; Stephen N Hewitt; Wesley C Van Voorhis; Peter J Myler
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-01-01       Impact factor: 1.056

2.  AhpC of the mycobacterial antioxidant defense system and its interaction with its reducing partner Thioredoxin-C.

Authors:  Chui Fann Wong; Joon Shin; Malathy Sony Subramanian Manimekalai; Wuan Geok Saw; Zhan Yin; Shashi Bhushan; Arvind Kumar; Priya Ragunathan; Gerhard Grüber
Journal:  Sci Rep       Date:  2017-07-11       Impact factor: 4.379

3.  Docking into Mycobacterium tuberculosis Thioredoxin Reductase Protein Yields Pyrazolone Lead Molecules for Methicillin-Resistant Staphylococcus aureus.

Authors:  Noreena L Sweeney; Lauren Lipker; Alicia M Hanson; Chris J Bohl; Katie E Engel; Kelsey S Kalous; Mary E Stemper; Daniel S Sem; William R Schwan
Journal:  Antibiotics (Basel)       Date:  2017-01-28

Review 4.  Solution NMR Studies of Mycobacterium tuberculosis Proteins for Antibiotic Target Discovery.

Authors:  Do-Hee Kim; Sung-Min Kang; Bong-Jin Lee
Journal:  Molecules       Date:  2017-08-31       Impact factor: 4.411

5.  Transcriptional Response of Mycobacterium tuberculosis to Cigarette Smoke Condensate.

Authors:  Danicke Willemse; Chivonne Moodley; Smriti Mehra; Deepak Kaushal
Journal:  Front Microbiol       Date:  2021-10-15       Impact factor: 5.640

  5 in total

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