Literature DB >> 23224093

Rapid hepatitis C virus divergence among chronically infected individuals.

Mayra Cruz-Rivera1, Juan Carlos Carpio-Pedroza, Alejandro Escobar-Gutiérrez, Daniela Lozano, Arely Vergara-Castaneda, Pilar Rivera-Osorio, Armando Martinez-Guarneros, Carlos A Vazquez Chacon, Salvador Fonseca-Coronado, Gilberto Vaughan.   

Abstract

Here, we analyze the viral divergence among hepatitis C virus (HCV) chronic cases infected with genotype 1. The intrahost viral evolution was assessed by deep sequencing using the 454 Genome Sequencer platform. The results showed a rapid nucleotide sequence divergence. This notorious short-term viral evolution is of the utmost importance for the study of HCV transmission, because direct links between related samples were virtually lost. Thus, rapid divergence of HCV significantly affects genetic relatedness studies and outbreak investigations.

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Year:  2012        PMID: 23224093      PMCID: PMC3553878          DOI: 10.1128/JCM.03042-12

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  29 in total

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Authors:  P Librado; J Rozas
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2.  Rapid emergence of protease inhibitor resistance in hepatitis C virus.

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Review 3.  Individualisation of antiviral therapy for chronic hepatitis C.

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4.  Tracking the evolution of multiple in vitro hepatitis C virus replicon variants under protease inhibitor selection pressure by 454 deep sequencing.

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5.  Hepatitis C virus transmission bottlenecks analyzed by deep sequencing.

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6.  End-point limiting-dilution real-time PCR assay for evaluation of hepatitis C virus quasispecies in serum: performance under optimal and suboptimal conditions.

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Review 7.  Epidemiology of hepatitis C virus infection.

Authors:  Miriam J Alter
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8.  Genetic variation in IL28B predicts hepatitis C treatment-induced viral clearance.

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Journal:  Nature       Date:  2009-08-16       Impact factor: 49.962

9.  Divergent and convergent evolution after a common-source outbreak of hepatitis C virus.

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10.  Quantifying the diversification of hepatitis C virus (HCV) during primary infection: estimates of the in vivo mutation rate.

Authors:  Ruy M Ribeiro; Hui Li; Shuyi Wang; Mark B Stoddard; Gerald H Learn; Bette T Korber; Tanmoy Bhattacharya; Jeremie Guedj; Erica H Parrish; Beatrice H Hahn; George M Shaw; Alan S Perelson
Journal:  PLoS Pathog       Date:  2012-08-23       Impact factor: 6.823

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Journal:  World J Gastroenterol       Date:  2014-11-21       Impact factor: 5.742

2.  Vertical transmission of hepatitis C virus: a tale of multiple outcomes.

Authors:  Alejandro Escobar-Gutiérrez; Hugo Soudeyns; Ariane Larouche; Juan Carlos Carpio-Pedroza; Armando Martinez-Guarneros; Carlos A Vazquez-Chacon; Salvador Fonseca-Coronado; Lilian H T Yamasaki; Karina Ruiz-Tovar; Mayra Cruz-Rivera
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Review 4.  Advanced molecular surveillance of hepatitis C virus.

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Journal:  Viruses       Date:  2015-03-13       Impact factor: 5.048

5.  Next-generation sequencing sheds light on the natural history of hepatitis C infection in patients who fail treatment.

Authors:  Tamer Abdelrahman; Joseph Hughes; Janice Main; John McLauchlan; Mark Thursz; Emma Thomson
Journal:  Hepatology       Date:  2014-07-30       Impact factor: 17.425

6.  Spouse-to-Spouse Transmission and Evolution of Hypervariable Region 1 and 5' Untranslated Region of Hepatitis C Virus Analyzed by Next-Generation Sequencing.

Authors:  Kamila Caraballo Cortes; Osvaldo Zagordi; Joanna Jabłońska; Agnieszka Pawełczyk; Natalia Kubisa; Karol Perlejewski; Iwona Bukowska-Ośko; Rafał Płoski; Marek Radkowski; Tomasz Laskus
Journal:  PLoS One       Date:  2016-02-26       Impact factor: 3.240

7.  A Mutation Identified in Neonatal Microcephaly Destabilizes Zika Virus NS1 Assembly in Vitro.

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Journal:  Sci Rep       Date:  2017-02-15       Impact factor: 4.379

8.  Hepatitis C virus genotype/subtype distribution and evolution among Chinese blood donors: Revealing recent viral expansion.

Authors:  Yu Zhang; Zhan Gao; Shaoli Wang; Jing Liu; Ness Paul; Tao He; Cunxu Liu; Hongbin Zhang; Yunlai Lv; Ru'an Cao; Wei Mao; Jianhua Wan; Hongli Ma; Mei Huang; Yu Liu; Jingxing Wang; Pu Liao; Peibin Zeng; Miao He; Hua Shan
Journal:  PLoS One       Date:  2020-07-10       Impact factor: 3.240

Review 9.  The role of HCV proteins on treatment outcomes.

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Journal:  Virol J       Date:  2015-12-15       Impact factor: 4.099

  9 in total

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