Literature DB >> 23221419

Monitoring spike train synchrony.

Thomas Kreuz1, Daniel Chicharro, Conor Houghton, Ralph G Andrzejak, Florian Mormann.   

Abstract

Recently, the SPIKE-distance has been proposed as a parameter-free and timescale-independent measure of spike train synchrony. This measure is time resolved since it relies on instantaneous estimates of spike train dissimilarity. However, its original definition led to spuriously high instantaneous values for eventlike firing patterns. Here we present a substantial improvement of this measure that eliminates this shortcoming. The reliability gained allows us to track changes in instantaneous clustering, i.e., time-localized patterns of (dis)similarity among multiple spike trains. Additional new features include selective and triggered temporal averaging as well as the instantaneous comparison of spike train groups. In a second step, a causal SPIKE-distance is defined such that the instantaneous values of dissimilarity rely on past information only so that time-resolved spike train synchrony can be estimated in real time. We demonstrate that these methods are capable of extracting valuable information from field data by monitoring the synchrony between neuronal spike trains during an epileptic seizure. Finally, the applicability of both the regular and the real-time SPIKE-distance to continuous data is illustrated on model electroencephalographic (EEG) recordings.

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Mesh:

Year:  2012        PMID: 23221419     DOI: 10.1152/jn.00873.2012

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.714


  29 in total

1.  Quantification of bursting and synchrony in cultured hippocampal neurons.

Authors:  Lawrence N Eisenman; Christine M Emnett; Jayaram Mohan; Charles F Zorumski; Steven Mennerick
Journal:  J Neurophysiol       Date:  2015-06-03       Impact factor: 2.714

2.  Detecting pairwise correlations in spike trains: an objective comparison of methods and application to the study of retinal waves.

Authors:  Catherine S Cutts; Stephen J Eglen
Journal:  J Neurosci       Date:  2014-10-22       Impact factor: 6.167

3.  Noise-induced burst and spike synchronizations in an inhibitory small-world network of subthreshold bursting neurons.

Authors:  Sang-Yoon Kim; Woochang Lim
Journal:  Cogn Neurodyn       Date:  2014-11-29       Impact factor: 5.082

4.  SPIKY: a graphical user interface for monitoring spike train synchrony.

Authors:  Thomas Kreuz; Mario Mulansky; Nebojsa Bozanic
Journal:  J Neurophysiol       Date:  2015-03-04       Impact factor: 2.714

5.  Efficient neural spike sorting using data subdivision and unification.

Authors:  Masood Ul Hassan; Rakesh Veerabhadrappa; Asim Bhatti
Journal:  PLoS One       Date:  2021-02-10       Impact factor: 3.240

Review 6.  Graph analysis of functional brain networks: practical issues in translational neuroscience.

Authors:  Fabrizio De Vico Fallani; Jonas Richiardi; Mario Chavez; Sophie Achard
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-10-05       Impact factor: 6.237

7.  Methods for implantation of micro-wire bundles and optimization of single/multi-unit recordings from human mesial temporal lobe.

Authors:  A Misra; J F Burke; A G Ramayya; J Jacobs; M R Sperling; K A Moxon; M J Kahana; J J Evans; A D Sharan
Journal:  J Neural Eng       Date:  2014-03-10       Impact factor: 5.379

8.  Measuring spike timing distance in the Hindmarsh-Rose neurons.

Authors:  Jinjie Zhu; Xianbin Liu
Journal:  Cogn Neurodyn       Date:  2017-12-27       Impact factor: 5.082

9.  Theta Oscillations Gate the Transmission of Reliable Sequences in the Medial Entorhinal Cortex.

Authors:  Arun Neru; Collins Assisi
Journal:  eNeuro       Date:  2021-06-17

10.  Parameter estimation of neuron models using in-vitro and in-vivo electrophysiological data.

Authors:  Eoin P Lynch; Conor J Houghton
Journal:  Front Neuroinform       Date:  2015-04-20       Impact factor: 4.081

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