Literature DB >> 23214944

Peptide-conjugated pterins as inhibitors of ricin toxin A.

Ryota Saito1, Jeff M Pruet, Lawrence A Manzano, Karl Jasheway, Arthur F Monzingo, Paul A Wiget, Ishan Kamat, Eric V Anslyn, Jon D Robertus.   

Abstract

Several 7-peptide-substituted pterins were synthesized and tested as competitive active-site inhibitors of ricin toxin A (RTA). Focus began on dipeptide conjugates, and these results further guided the construction of several tripeptide conjugates. The binding of these compounds to RTA was studied via a luminescence-based kinetic assay, as well as through X-ray crystallography. Despite the relatively polar, solvent exposed active site, several hydrophobic interactions, most commonly π-interactions not predicted by modeling programs, were identified in all of the best-performing inhibitors. Nearly all of these compounds provide IC₅₀ values in the low micromolar range.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23214944      PMCID: PMC3552522          DOI: 10.1021/jm3016393

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  35 in total

1.  Structure-based design and characterization of novel platforms for ricin and shiga toxin inhibition.

Authors:  Darcie J Miller; Kabyadi Ravikumar; Huafeng Shen; Jung-Keun Suh; Sean M Kerwin; Jon D Robertus
Journal:  J Med Chem       Date:  2002-01-03       Impact factor: 7.446

2.  The Cationminus signpi Interaction.

Authors:  Jennifer C. Ma; Dennis A. Dougherty
Journal:  Chem Rev       Date:  1997-08-05       Impact factor: 60.622

3.  Assessment of phase accuracy by cross validation: the free R value. Methods and applications.

Authors:  A T Brünger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1993-01-01

4.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

5.  Evaluation of protein farnesyltransferase substrate specificity using synthetic peptide libraries.

Authors:  Amanda J Krzysiak; Sarah A Scott; Katherine A Hicks; Carol A Fierke; Richard A Gibbs
Journal:  Bioorg Med Chem Lett       Date:  2007-08-16       Impact factor: 2.823

6.  Functional characterization of peptide-based anthrax toxin inhibitors.

Authors:  Kunal Gujraty; Skanda Sadacharan; Mia Frost; Vincent Poon; Ravi S Kane; Jeremy Mogridge
Journal:  Mol Pharm       Date:  2005 Sep-Oct       Impact factor: 4.939

7.  Site-directed mutagenesis of ricin A-chain and implications for the mechanism of action.

Authors:  M P Ready; Y Kim; J D Robertus
Journal:  Proteins       Date:  1991

8.  X-ray analysis of substrate analogs in the ricin A-chain active site.

Authors:  A F Monzingo; J D Robertus
Journal:  J Mol Biol       Date:  1992-10-20       Impact factor: 5.469

9.  Synthesis and evaluation of 3-phenylpyrazolo[3,4-d]pyrimidine-peptide conjugates as Src kinase inhibitors.

Authors:  Anil Kumar; Yuehao Wang; Xiaofeng Lin; Gongqin Sun; Keykavous Parang
Journal:  ChemMedChem       Date:  2007-09       Impact factor: 3.466

10.  MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Authors:  Ian W Davis; Andrew Leaver-Fay; Vincent B Chen; Jeremy N Block; Gary J Kapral; Xueyi Wang; Laura W Murray; W Bryan Arendall; Jack Snoeyink; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

View more
  8 in total

1.  Small Molecule Inhibitors Targeting the Interaction of Ricin Toxin A Subunit with Ribosomes.

Authors:  Xiao-Ping Li; Rajesh K Harijan; Jennifer N Kahn; Vern L Schramm; Nilgun E Tumer
Journal:  ACS Infect Dis       Date:  2020-06-08       Impact factor: 5.084

2.  An Electrochemical Approach to Follow and Evaluate the Kinetic Catalysis of Ricin on hsDNA.

Authors:  George Oliveira; José Maurício Schneedorf
Journal:  Life (Basel)       Date:  2021-04-29

3.  Exploring the scope of DBU-promoted amidations of 7-methoxycarbonylpterin.

Authors:  Anna R Bockman; Jeffrey M Pruet
Journal:  Beilstein J Org Chem       Date:  2020-03-26       Impact factor: 2.883

4.  Thermochemical and Quantum Descriptor Calculations for Gaining Insight into Ricin Toxin A (RTA) Inhibitors.

Authors:  Acassio Rocha-Santos; Elton José Ferreira Chaves; Igor Barden Grillo; Amanara Souza de Freitas; Demétrius Antônio Machado Araújo; Gerd Bruno Rocha
Journal:  ACS Omega       Date:  2021-03-23

5.  Ligand-Based Virtual Screening, Molecular Docking, Molecular Dynamics, and MM-PBSA Calculations towards the Identification of Potential Novel Ricin Inhibitors.

Authors:  Fernanda D Botelho; Marcelo C Dos Santos; Arlan da S Gonçalves; Kamil Kuca; Martin Valis; Steven R LaPlante; Tanos C C França; Joyce S F D de Almeida
Journal:  Toxins (Basel)       Date:  2020-11-26       Impact factor: 4.546

6.  Theoretical Investigation of Repurposed Drugs Potentially Capable of Binding to the Catalytic Site and the Secondary Binding Pocket of Subunit A of Ricin.

Authors:  Tanos C C França; Fernanda D Botelho; Michael L Drummond; Steven R LaPlante
Journal:  ACS Omega       Date:  2022-08-26

7.  BODIPY-Based Fluorescent Probes for Sensing Protein Surface-Hydrophobicity.

Authors:  Nethaniah Dorh; Shilei Zhu; Kamal B Dhungana; Ranjit Pati; Fen-Tair Luo; Haiying Liu; Ashutosh Tiwari
Journal:  Sci Rep       Date:  2015-12-18       Impact factor: 4.379

Review 8.  Functional Assays for Measuring the Catalytic Activity of Ribosome Inactivating Proteins.

Authors:  Yijun Zhou; Xiao-Ping Li; Jennifer N Kahn; Nilgun E Tumer
Journal:  Toxins (Basel)       Date:  2018-06-14       Impact factor: 4.546

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.