Literature DB >> 23214818

Impact of ultrafast electronic damage in single-particle x-ray imaging experiments.

U Lorenz1, N M Kabachnik, E Weckert, I A Vartanyants.   

Abstract

In single-particle coherent x-ray diffraction imaging experiments, performed at x-ray free-electron lasers (XFELs), samples are exposed to intense x-ray pulses to obtain single-shot diffraction patterns. The high intensity induces electronic dynamics on the femtosecond time scale in the system, which can reduce the contrast of the obtained diffraction patterns and adds an isotropic background. We quantify the degradation of the diffraction pattern from ultrafast electronic damage by performing simulations on a biological sample exposed to x-ray pulses with different parameters. We find that the contrast is substantially reduced and the background is considerably strong only if almost all electrons are removed from their parent atoms. This happens at fluences of at least one order of magnitude larger than provided at currently available XFEL sources.

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Year:  2012        PMID: 23214818     DOI: 10.1103/PhysRevE.86.051911

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  11 in total

1.  Observation of femtosecond X-ray interactions with matter using an X-ray-X-ray pump-probe scheme.

Authors:  Ichiro Inoue; Yuichi Inubushi; Takahiro Sato; Kensuke Tono; Tetsuo Katayama; Takashi Kameshima; Kanade Ogawa; Tadashi Togashi; Shigeki Owada; Yoshiyuki Amemiya; Takashi Tanaka; Toru Hara; Makina Yabashi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-25       Impact factor: 11.205

2.  Ultrafast isomerization initiated by X-ray core ionization.

Authors:  Chelsea E Liekhus-Schmaltz; Ian Tenney; Timur Osipov; Alvaro Sanchez-Gonzalez; Nora Berrah; Rebecca Boll; Cedric Bomme; Christoph Bostedt; John D Bozek; Sebastian Carron; Ryan Coffee; Julien Devin; Benjamin Erk; Ken R Ferguson; Robert W Field; Lutz Foucar; Leszek J Frasinski; James M Glownia; Markus Gühr; Andrei Kamalov; Jacek Krzywinski; Heng Li; Jonathan P Marangos; Todd J Martinez; Brian K McFarland; Shungo Miyabe; Brendan Murphy; Adi Natan; Daniel Rolles; Artem Rudenko; Marco Siano; Emma R Simpson; Limor Spector; Michele Swiggers; Daniel Walke; Song Wang; Thorsten Weber; Philip H Bucksbaum; Vladimir S Petrovic
Journal:  Nat Commun       Date:  2015-09-10       Impact factor: 14.919

3.  Perspectives for imaging single protein molecules with the present design of the European XFEL.

Authors:  Kartik Ayyer; Gianluca Geloni; Vitali Kocharyan; Evgeni Saldin; Svitozar Serkez; Oleksandr Yefanov; Igor Zagorodnov
Journal:  Struct Dyn       Date:  2015-04-27       Impact factor: 2.920

4.  Measurements of Long-range Electronic Correlations During Femtosecond Diffraction Experiments Performed on Nanocrystals of Buckminsterfullerene.

Authors:  Rebecca A Ryan; Sophie Williams; Andrew V Martin; Ruben A Dilanian; Connie Darmanin; Corey T Putkunz; David Wood; Victor A Streltsov; Michael W M Jones; Naylyn Gaffney; Felix Hofmann; Garth J Williams; Sebastien Boutet; Marc Messerschmidt; M Marvin Seibert; Evan K Curwood; Eugeniu Balaur; Andrew G Peele; Keith A Nugent; Harry M Quiney; Brian Abbey
Journal:  J Vis Exp       Date:  2017-08-22       Impact factor: 1.355

5.  Correlations in Scattered X-Ray Laser Pulses Reveal Nanoscale Structural Features of Viruses.

Authors:  Ruslan P Kurta; Jeffrey J Donatelli; Chun Hong Yoon; Peter Berntsen; Johan Bielecki; Benedikt J Daurer; Hasan DeMirci; Petra Fromme; Max Felix Hantke; Filipe R N C Maia; Anna Munke; Carl Nettelblad; Kanupriya Pande; Hemanth K N Reddy; Jonas A Sellberg; Raymond G Sierra; Martin Svenda; Gijs van der Schot; Ivan A Vartanyants; Garth J Williams; P Lourdu Xavier; Andrew Aquila; Peter H Zwart; Adrian P Mancuso
Journal:  Phys Rev Lett       Date:  2017-10-12       Impact factor: 9.161

6.  Single-molecule imaging with longer X-ray laser pulses.

Authors:  Andrew V Martin; Justine K Corso; Carl Caleman; Nicusor Timneanu; Harry M Quiney
Journal:  IUCrJ       Date:  2015-10-21       Impact factor: 4.769

7.  Time dependence of X-ray polarizability of a crystal induced by an intense femtosecond X-ray pulse.

Authors:  A Leonov; D Ksenzov; A Benediktovitch; I Feranchuk; U Pietsch
Journal:  IUCrJ       Date:  2014-10-23       Impact factor: 4.769

8.  The linac coherent light source single particle imaging road map.

Authors:  A Aquila; A Barty; C Bostedt; S Boutet; G Carini; D dePonte; P Drell; S Doniach; K H Downing; T Earnest; H Elmlund; V Elser; M Gühr; J Hajdu; J Hastings; S P Hau-Riege; Z Huang; E E Lattman; F R N C Maia; S Marchesini; A Ourmazd; C Pellegrini; R Santra; I Schlichting; C Schroer; J C H Spence; I A Vartanyants; S Wakatsuki; W I Weis; G J Williams
Journal:  Struct Dyn       Date:  2015-04-21       Impact factor: 2.920

9.  Start-to-end simulation of single-particle imaging using ultra-short pulses at the European X-ray Free-Electron Laser.

Authors:  Carsten Fortmann-Grote; Alexey Buzmakov; Zoltan Jurek; Ne-Te Duane Loh; Liubov Samoylova; Robin Santra; Evgeny A Schneidmiller; Thomas Tschentscher; Sergey Yakubov; Chun Hong Yoon; Michael V Yurkov; Beata Ziaja-Motyka; Adrian P Mancuso
Journal:  IUCrJ       Date:  2017-09-01       Impact factor: 4.769

10.  Single-particle imaging without symmetry constraints at an X-ray free-electron laser.

Authors:  Max Rose; Sergey Bobkov; Kartik Ayyer; Ruslan P Kurta; Dmitry Dzhigaev; Young Yong Kim; Andrew J Morgan; Chun Hong Yoon; Daniel Westphal; Johan Bielecki; Jonas A Sellberg; Garth Williams; Filipe R N C Maia; Olexander M Yefanov; Vyacheslav Ilyin; Adrian P Mancuso; Henry N Chapman; Brenda G Hogue; Andrew Aquila; Anton Barty; Ivan A Vartanyants
Journal:  IUCrJ       Date:  2018-09-18       Impact factor: 4.769

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