Literature DB >> 23213353

Comparative analysis of the biosynthetic systems for fungal bicyclo[2.2.2]diazaoctane indole alkaloids: the (+)/(-)-notoamide, paraherquamide and malbrancheamide pathways.

Shengying Li1, Krithika Anand, Hong Tran, Fengan Yu, Jennifer M Finefield, James D Sunderhaus, Timothy J McAfoos, Sachiko Tsukamoto, Robert M Williams, David H Sherman.   

Abstract

The biosynthesis of fungal bicyclo[2.2.2]diazaoctane indole alkaloids with a wide spectrum of biological activities have attracted increasing interest. Their intriguing mode of assembly has long been proposed to feature a non-ribosomal peptide synthetase, a presumed intramolecular Diels-Alderase, a variant number of prenyltransferases, and a series of oxidases responsible for the diverse tailoring modifications of their n class="Chemical">cyclodipeptide-based structural core. Until recently, the details of these biosynthetic pathways have remained largely unknown due to lack of information on the fungal derived biosynthetic gene clusters. Herein, we report a comparative analysis of four natural product metabolic systems of a select group of bicyclo[2.2.2]diazaoctane indole alkaloids including (+)/(-)-notoamide, paraherquamide and malbrancheamide, in which we propose an enzyme for each step in the biosynthetic pathway based on deep annotation and on-going biochemical studies.

Entities:  

Year:  2012        PMID: 23213353      PMCID: PMC3511817          DOI: 10.1039/C2MD20029E

Source DB:  PubMed          Journal:  Medchemcomm        ISSN: 2040-2503            Impact factor:   3.597


  66 in total

1.  Biosynthesis of 4-methylproline in cyanobacteria: cloning of nosE and nosF genes and biochemical characterization of the encoded dehydrogenase and reductase activities.

Authors:  Hendrik Luesch; Dietmar Hoffmann; Joan M Hevel; Julia E Becker; Trimurtulu Golakoti; Richard E Moore
Journal:  J Org Chem       Date:  2003-01-10       Impact factor: 4.354

Review 2.  Chemistry and biology of biosynthetic Diels-Alder reactions.

Authors:  Emily M Stocking; Robert M Williams
Journal:  Angew Chem Int Ed Engl       Date:  2003-07-14       Impact factor: 15.336

Review 3.  Methods and options for the heterologous production of complex natural products.

Authors:  Haoran Zhang; Brett A Boghigian; John Armando; Blaine A Pfeifer
Journal:  Nat Prod Rep       Date:  2010-11-09       Impact factor: 13.423

4.  Identification of cytochrome P450s required for fumitremorgin biosynthesis in Aspergillus fumigatus.

Authors:  Naoki Kato; Hirokazu Suzuki; Hiroshi Takagi; Yukihiro Asami; Hideaki Kakeya; Masakazu Uramoto; Takeo Usui; Shunji Takahashi; Yoshikazu Sugimoto; Hiroyuki Osada
Journal:  Chembiochem       Date:  2009-03-23       Impact factor: 3.164

5.  Studies on the Biosynthesis of the Stephacidin and Notoamide Natural Products: A Stereochemical and Genetic Conundrum.

Authors:  James D Sunderhaus; David H Sherman; Robert M Williams
Journal:  Isr J Chem       Date:  2011-04       Impact factor: 3.333

6.  Isolation, structure elucidation, and biomimetic total synthesis of versicolamide B, and the isolation of antipodal (-)-stephacidin A and (+)-notoamide B from Aspergillus versicolor NRRL 35600.

Authors:  Thomas J Greshock; Alan W Grubbs; Ping Jiao; Donald T Wicklow; James B Gloer; Robert M Williams
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

7.  Utilizing DART mass spectrometry to pinpoint halogenated metabolites from a marine invertebrate-derived fungus.

Authors:  Katharine R Watts; Steven T Loveridge; Karen Tenney; Joseph Media; Frederick A Valeriote; Phillip Crews
Journal:  J Org Chem       Date:  2011-06-29       Impact factor: 4.354

Review 8.  Comparative analysis of the biosynthetic gene clusters and pathways for three structurally related antitumor antibiotics: bleomycin, tallysomycin, and zorbamycin.

Authors:  Ute Galm; Evelyn Wendt-Pienkowski; Liyan Wang; Sheng-Xiong Huang; Claudia Unsin; Meifeng Tao; Jane M Coughlin; Ben Shen
Journal:  J Nat Prod       Date:  2011-01-06       Impact factor: 4.050

9.  Biosynthetic gene cluster for the cladoniamides, bis-indoles with a rearranged scaffold.

Authors:  Katherine S Ryan
Journal:  PLoS One       Date:  2011-08-18       Impact factor: 3.240

10.  A flavin-dependent halogenase catalyzes the chlorination step in the biosynthesis of Dictyostelium differentiation-inducing factor 1.

Authors:  Christopher S Neumann; Christopher T Walsh; Robert R Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

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  21 in total

1.  Function and Structure of MalA/MalA', Iterative Halogenases for Late-Stage C-H Functionalization of Indole Alkaloids.

Authors:  Amy E Fraley; Marc Garcia-Borràs; Ashootosh Tripathi; Dheeraj Khare; Eduardo V Mercado-Marin; Hong Tran; Qingyun Dan; Gabrielle P Webb; Katharine R Watts; Phillip Crews; Richmond Sarpong; Robert M Williams; Janet L Smith; K N Houk; David H Sherman
Journal:  J Am Chem Soc       Date:  2017-08-21       Impact factor: 15.419

2.  Isolation of amoenamide A and five antipodal prenylated alkaloids from Aspergillus amoenus NRRL 35600.

Authors:  Kayo Sugimoto; Yusaku Sadahiro; Ippei Kagiyama; Hikaru Kato; David H Sherman; Robert M Williams; Sachiko Tsukamoto
Journal:  Tetrahedron Lett       Date:  2017-05-18       Impact factor: 2.415

Review 3.  Natural [4 + 2]-Cyclases.

Authors:  Byung-Sun Jeon; Shao-An Wang; Mark W Ruszczycky; Hung-Wen Liu
Journal:  Chem Rev       Date:  2016-12-01       Impact factor: 60.622

Review 4.  Biosynthesis of fungal indole alkaloids.

Authors:  Wei Xu; Diego J Gavia; Yi Tang
Journal:  Nat Prod Rep       Date:  2014-10       Impact factor: 13.423

5.  Bioconversion of 6-epi-Notoamide T Produces Metabolites of Unprecedented Structures in a Marine-derived Aspergillus sp.

Authors:  Hikaru Kato; Takashi Nakahara; Michitaka Yamaguchi; Ippei Kagiyama; Jennifer M Finefield; James D Sunderhaus; David H Sherman; Robert M Williams; Sachiko Tsukamoto
Journal:  Tetrahedron Lett       Date:  2015-01-01       Impact factor: 2.415

6.  Flavin-Dependent Monooxygenases NotI and NotI' Mediate Spiro-Oxindole Formation in Biosynthesis of the Notoamides.

Authors:  Amy E Fraley; Hong T Tran; Samantha P Kelly; Sean A Newmister; Ashootosh Tripathi; Hikaru Kato; Sachiko Tsukamoto; Lei Du; Shengying Li; Robert M Williams; David H Sherman
Journal:  Chembiochem       Date:  2020-05-14       Impact factor: 3.164

7.  Natural Diels-Alderases: Elusive and Irresistable.

Authors:  Kimberly Klas; Sachiko Tsukamoto; David H Sherman; Robert M Williams
Journal:  J Org Chem       Date:  2015-12-04       Impact factor: 4.354

8.  Fungal-derived brevianamide assembly by a stereoselective semipinacolase.

Authors:  Ying Ye; Lei Du; Xingwang Zhang; Sean A Newmister; Morgan McCauley; Juan V Alegre-Requena; Wei Zhang; Shuai Mu; Atsushi Minami; Amy E Fraley; Maria L Adrover-Castellano; Nolan A Carney; Vikram V Shende; Feifei Qi; Hideaki Oikawa; Hikaru Kato; Sachiko Tsukamoto; Robert S Paton; Robert M Williams; David H Sherman; Shengying Li
Journal:  Nat Catal       Date:  2020-05-18

9.  Taichunamides: Prenylated Indole Alkaloids from Aspergillus taichungensis (IBT 19404).

Authors:  Ippei Kagiyama; Hikaru Kato; Tatsuo Nehira; Jens C Frisvad; David H Sherman; Robert M Williams; Sachiko Tsukamoto
Journal:  Angew Chem Int Ed Engl       Date:  2015-12-08       Impact factor: 15.336

Review 10.  Enzyme evolution in fungal indole alkaloid biosynthesis.

Authors:  Amy E Fraley; David H Sherman
Journal:  FEBS J       Date:  2020-04       Impact factor: 5.542

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