Literature DB >> 23209204

Genome sequence of Idiomarina xiamenensis type strain 10-D-4.

Qiliang Lai1, Liping Wang, Wanpeng Wang, Zongze Shao.   

Abstract

Idiomarina xiamenensis strain 10-D-4(T) was isolated from an oil-degrading consortium enriched from surface seawater around the Xiamen island. Here, we present the draft genome of strain 10-D-4(T), which contains 2,899,282 bp with a G+C content of 49.48% and contains 2,673 protein-coding genes and 43 tRNA genes.

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Year:  2012        PMID： 23209204      PMCID： PMC3510615          DOI： 10.1128/JB.01855-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  8 in total

1.  Diversity and abundance of oil-degrading bacteria and alkane hydroxylase (alkB) genes in the subtropical seawater of Xiamen Island.

Authors:  Wanpeng Wang; Liping Wang; Zongze Shao
Journal:  Microb Ecol       Date:  2010-08-04       Impact factor: 4.552

2.  The COG database: a tool for genome-scale analysis of protein functions and evolution.

Authors:  R L Tatusov; M Y Galperin; D A Natale; E V Koonin
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  Genome sequence of Idiomarina sp. strain A28L, isolated from Pangong Lake, India.

Authors:  Hemant Kumar Gupta; Ajit Singh; Rakesh Sharma
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

4.  Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy.

Authors:  Shaobin Hou; Jimmy H Saw; Kit Shan Lee; Tracey A Freitas; Claude Belisle; Yutaka Kawarabayasi; Stuart P Donachie; Alla Pikina; Michael Y Galperin; Eugene V Koonin; Kira S Makarova; Marina V Omelchenko; Alexander Sorokin; Yuri I Wolf; Qing X Li; Young Soo Keum; Sonia Campbell; Judith Denery; Shin-Ichi Aizawa; Satoshi Shibata; Alexander Malahoff; Maqsudul Alam
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-13       Impact factor: 11.205

5.  Idiomarina maris sp. nov., a marine bacterium isolated from sediment.

Authors:  Yan-Jiao Zhang; Xi-Ying Zhang; Hui-Lin Zhao; Ming-Yang Zhou; Hui-Juan Li; Zhao-Ming Gao; Xiu-Lan Chen; Hong-Yue Dang; Yu-Zhong Zhang
Journal:  Int J Syst Evol Microbiol       Date:  2011-03-25       Impact factor: 2.747

6.  Idiomarina aquimaris sp. nov., isolated from the reef-building coral Isopora palifera.

Authors:  Ming-Hui Chen; Shih-Yi Sheu; Chaolun Allen Chen; Jih-Terng Wang; Wen-Ming Chen
Journal:  Int J Syst Evol Microbiol       Date:  2011-08-19       Impact factor: 2.747

7.  Idiomarina gen. nov., comprising novel indigenous deep-sea bacteria from the Pacific Ocean, including descriptions of two species, Idiomarina abyssalis sp. nov. and Idiomarina zobellii sp. nov.

Authors:  E P Ivanova; L A Romanenko; J Chun; M H Matte; G R Matte; V V Mikhailov; V I Svetashev; A Huq; T Maugel; R R Colwell
Journal:  Int J Syst Evol Microbiol       Date:  2000-03       Impact factor: 2.747

8.  Idiomarina xiamenensis sp. nov., isolated from surface seawater, and proposal to transfer Pseudidiomarina aestuarii to the genus Idiomarina as Idiomarina aestuarii comb. nov.

Authors:  Liping Wang; Qiliang Lai; Yuanyuan Fu; Hua Chen; Wanpeng Wang; Jianning Wang; Fengqin Sun; Zongze Shao
Journal:  Int J Syst Evol Microbiol       Date:  2010-05-28       Impact factor: 2.747
  8 in total
  2 in total

1.  Responses of bacterial communities in seagrass sediments to polycyclic aromatic hydrocarbon-induced stress.

Authors:  Juan Ling; Yu-Feng Jiang; You-Shao Wang; Jun-De Dong; Yan-Ying Zhang; Yuan-Zhou Zhang
Journal:  Ecotoxicology       Date:  2015-06-06       Impact factor: 2.823

2.  Genome Sequence of the Deep-Sea Bacterium Idiomarina abyssalis KMM 227T.

Authors:  Bruce A Rheaume; Scott Mithoefer; Kyle S MacLea
Journal:  Genome Announc       Date:  2015-10-29
  2 in total

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