Literature DB >> 23195955

Discovery of linear cyclotides in monocot plant Panicum laxum of Poaceae family provides new insights into evolution and distribution of cyclotides in plants.

Giang Kien Truc Nguyen1, Yilong Lian, Edmund Weng Hou Pang, Phuong Quoc Thuc Nguyen, Tuan Dinh Tran, James P Tam.   

Abstract

Cyclotides are disulfide-rich macrocyclic peptides that display a wide range of bioactivities and represent an important group of plant defense peptide biologics. A few linear variants of cyclotides have recently been identified. They share a high sequence homology with cyclotides but are biosynthetically unable to cyclize from their precursors. All hitherto reported cyclotides and their acyclic variants were isolated from dicot plants of the Rubiaceae, Violaceae, Cucurbitaceae, and recently the Fabaceae and Solanaceae families. Although several cyclotide-like genes in the Poaceae family were known from the data mining of the National Center for Biotechnology Information (NCBI) nucleotide database, their expression at the protein level has yet to be proven. Here, we report the discovery and characterization of nine novel linear cyclotides, designated as panitides L1-9, from the Panicum laxum of the Poaceae family and provide the first evidence of linear cyclotides at the protein level in a monocot plant. Disulfide mapping of panitide L3 showed that it possesses a cystine knot arrangement similar to cyclotides. Several panitides were shown to be active against Escherichia coli and cytotoxic to HeLa cells. They also displayed a high stability against heat and proteolytic degradation. Oxidative folding of the disulfide-reduced panitide L1 showed that it can fold efficiently into its native form. The presence of linear cyclotides in both dicots and monocots suggests their ancient origin and existence before the divergence of these two groups of flowering plants. Moreover, the Poaceae family contains many important food crops, and our discovery may open up new avenues of research using cyclotides and their acyclic variants in crop protection.

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Year:  2012        PMID: 23195955      PMCID: PMC3561556          DOI: 10.1074/jbc.M112.415356

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  41 in total

1.  Plant cyclotides: A unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif.

Authors:  D J Craik; N L Daly; T Bond; C Waine
Journal:  J Mol Biol       Date:  1999-12-17       Impact factor: 5.469

2.  Antimicrobial dendrimeric peptides.

Authors:  James P Tam; Yi-An Lu; Jin-Long Yang
Journal:  Eur J Biochem       Date:  2002-02

Review 3.  Oldenlandia affinis (R&S) DC. A plant containing uteroactive peptides used in African traditional medicine.

Authors:  L Gran; F Sandberg; K Sletten
Journal:  J Ethnopharmacol       Date:  2000-06       Impact factor: 4.360

4.  Squash trypsin inhibitors from Momordica cochinchinensis exhibit an atypical macrocyclic structure.

Authors:  J F Hernandez; J Gagnon; L Chiche; T M Nguyen; J P Andrieu; A Heitz; T Trinh Hong; T T Pham; D Le Nguyen
Journal:  Biochemistry       Date:  2000-05-16       Impact factor: 3.162

5.  Cyclotides associate with leaf vasculature and are the products of a novel precursor in petunia (Solanaceae).

Authors:  Aaron G Poth; Joshua S Mylne; Julia Grassl; Russell E Lyons; A Harvey Millar; Michelle L Colgrave; David J Craik
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

6.  First cyclotide from Hybanthus (Violaceae).

Authors:  A M Broussalis; U Göransson; J D Coussio; G Ferraro; V Martino; P Claeson
Journal:  Phytochemistry       Date:  2001-09       Impact factor: 4.072

7.  Novel cyclotides and uncyclotides with highly shortened precursors from Chassalia chartacea and effects of methionine oxidation on bioactivities.

Authors:  Giang Kien Truc Nguyen; Wei Han Lim; Phuong Quoc Thuc Nguyen; James P Tam
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

8.  Cycloviolins A-D, anti-HIV macrocyclic peptides from Leonia cymosa.

Authors:  Y F Hallock; R C Sowder; L K Pannell; C B Hughes; D G Johnson; R Gulakowski; J H Cardellina; M R Boyd
Journal:  J Org Chem       Date:  2000-01-14       Impact factor: 4.354

9.  Biosynthesis and insecticidal properties of plant cyclotides: the cyclic knotted proteins from Oldenlandia affinis.

Authors:  C Jennings; J West; C Waine; D Craik; M Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-04       Impact factor: 11.205

10.  Phosphatidylethanolamine binding is a conserved feature of cyclotide-membrane interactions.

Authors:  Sónia Troeira Henriques; Yen-Hua Huang; Miguel A R B Castanho; Luis A Bagatolli; Secondo Sonza; Gilda Tachedjian; Norelle L Daly; David J Craik
Journal:  J Biol Chem       Date:  2012-08-01       Impact factor: 5.157

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  29 in total

1.  Two Blast-independent tools, CyPerl and CyExcel, for harvesting hundreds of novel cyclotides and analogues from plant genomes and protein databases.

Authors:  Jun Zhang; Zhengshuang Hua; Zebo Huang; QiZhu Chen; Qingyun Long; David J Craik; Alan J M Baker; Wensheng Shu; Bin Liao
Journal:  Planta       Date:  2014-12-21       Impact factor: 4.116

2.  A synthetic antimicrobial peptide BTD-S expressed in Arabidopsis thaliana confers enhanced resistance to Verticillium dahliae.

Authors:  Feng Li; Hao Shen; Ming Wang; Kai Fan; Noreen Bibi; Mi Ni; Shuna Yuan; Xuede Wang
Journal:  Mol Genet Genomics       Date:  2016-04-30       Impact factor: 3.291

3.  Prediction of Leymus arenarius (L.) antimicrobial peptides based on de novo transcriptome assembly.

Authors:  Anna A Slavokhotova; Andrey A Shelenkov; Tatyana I Odintsova
Journal:  Plant Mol Biol       Date:  2015-09-14       Impact factor: 4.076

4.  Cyclotide discovery in Gentianales revisited--identification and characterization of cyclic cystine-knot peptides and their phylogenetic distribution in Rubiaceae plants.

Authors:  Johannes Koehbach; Alfred F Attah; Andreas Berger; Roland Hellinger; Toni M Kutchan; Eric J Carpenter; Megan Rolf; Mubo A Sonibare; Jones O Moody; Gane Ka-Shu Wong; Steven Dessein; Harald Greger; Christian W Gruber
Journal:  Biopolymers       Date:  2013-09       Impact factor: 2.505

5.  Cyclotide structure-activity relationships: qualitative and quantitative approaches linking cytotoxic and anthelmintic activity to the clustering of physicochemical forces.

Authors:  Sungkyu Park; Adam A Strömstedt; Ulf Göransson
Journal:  PLoS One       Date:  2014-03-28       Impact factor: 3.240

6.  A high-throughput peptidomic strategy to decipher the molecular diversity of cyclic cysteine-rich peptides.

Authors:  Aida Serra; Xinya Hemu; Giang K T Nguyen; Ngan T K Nguyen; Siu Kwan Sze; James P Tam
Journal:  Sci Rep       Date:  2016-03-11       Impact factor: 4.379

7.  Oxytocic plant cyclotides as templates for peptide G protein-coupled receptor ligand design.

Authors:  Johannes Koehbach; Margaret O'Brien; Markus Muttenthaler; Marion Miazzo; Muharrem Akcan; Alysha G Elliott; Norelle L Daly; Peta J Harvey; Sarah Arrowsmith; Sunithi Gunasekera; Terry J Smith; Susan Wray; Ulf Göransson; Philip E Dawson; David J Craik; Michael Freissmuth; Christian W Gruber
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-18       Impact factor: 11.205

8.  Cyclotide host-defense tailored for species and environments in violets from the Canary Islands.

Authors:  Blazej Slazak; Klara Kaltenböck; Karin Steffen; Martyna Rogala; Priscila Rodríguez-Rodríguez; Anna Nilsson; Reza Shariatgorji; Per E Andrén; Ulf Göransson
Journal:  Sci Rep       Date:  2021-06-14       Impact factor: 4.379

9.  Cyclotides Suppress Human T-Lymphocyte Proliferation by an Interleukin 2-Dependent Mechanism.

Authors:  Carsten Gründemann; Kathrin Thell; Karin Lengen; Manuel Garcia-Käufer; Yen-Hua Huang; Roman Huber; David J Craik; Gernot Schabbauer; Christian W Gruber
Journal:  PLoS One       Date:  2013-06-26       Impact factor: 3.240

10.  A novel strategy for the discrimination of gelatinous Chinese medicines based on enzymatic digestion followed by nano-flow liquid chromatography in tandem with orbitrap mass spectrum detection.

Authors:  Huan Yang; Yuping Shen; Ying Xu; Aida Serra Maqueda; Jie Zheng; Qinan Wu; James P Tam
Journal:  Int J Nanomedicine       Date:  2015-08-05
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