Literature DB >> 22467870

Novel cyclotides and uncyclotides with highly shortened precursors from Chassalia chartacea and effects of methionine oxidation on bioactivities.

Giang Kien Truc Nguyen1, Wei Han Lim, Phuong Quoc Thuc Nguyen, James P Tam.   

Abstract

Cyclotides are a new class of plant biologics that display a diverse range of bioactivities with therapeutic potentials. They possess an unusual end-to-end cyclic backbone combined with a cystine knot arrangement, making them exceptionally stable to heat, chemical and enzymatic degradation. Currently, >200 cyclotides have been discovered but only three naturally occurring linear variants (also known as uncyclotides) have been isolated. In this study, we report the discovery of 18 novel peptides, chassatides C1 to C18, composed of 14 new cyclotides and four uncyclotides from Chassalia chartacea (Rubiaceae family). Thus far, this is the largest number of uncyclotides being reported in a single species. Activity testing showed that the uncyclotides not only retain the effectiveness but also are the most potent chassatides in the assays for antimicrobial, cytotoxic, and hemolytic activities. Genetic characterization of novel chassatides revealed that they have the shortest precursors of all known cyclotides hitherto isolated, which represents a new class of cyclotide precursors. This is the first report of cyclotide genes in a second genus, the Chassalia, other than the Hedyotis (Oldenlandia) of the Rubiaceae family. In addition, we also report the characterization of two Met-oxidized derivatives of chassatides C2 and C11. The oxidation of Met residue causes loss of bioactivities, strengthening the importance of the hydrophobic patch for membrane interaction.

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Year:  2012        PMID: 22467870      PMCID: PMC3366795          DOI: 10.1074/jbc.M111.338970

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  42 in total

1.  New circulin macrocyclic polypeptides from Chassalia parvifolia.

Authors:  K R Gustafson; L K Walton; R C Sowder; D G Johnson; L K Pannell; J H Cardellina; M R Boyd
Journal:  J Nat Prod       Date:  2000-02       Impact factor: 4.050

2.  Antimicrobial dendrimeric peptides.

Authors:  James P Tam; Yi-An Lu; Jin-Long Yang
Journal:  Eur J Biochem       Date:  2002-02

3.  Linearization of a naturally occurring circular protein maintains structure but eliminates hemolytic activity.

Authors:  Daniel G Barry; Norelle L Daly; Richard J Clark; Lillian Sando; David J Craik
Journal:  Biochemistry       Date:  2003-06-10       Impact factor: 3.162

4.  Conserved structural and sequence elements implicated in the processing of gene-encoded circular proteins.

Authors:  Julie L Dutton; Rosemary F Renda; Clement Waine; Richard J Clark; Norelle L Daly; Cameron V Jennings; Marilyn A Anderson; David J Craik
Journal:  J Biol Chem       Date:  2004-08-24       Impact factor: 5.157

5.  Development of hydrophobicity parameters to analyze proteins which bear post- or cotranslational modifications.

Authors:  S D Black; D R Mould
Journal:  Anal Biochem       Date:  1991-02-15       Impact factor: 3.365

6.  Studies on the membrane interactions of the cyclotides kalata B1 and kalata B6 on model membrane systems by surface plasmon resonance.

Authors:  Hiroshi Kamimori; Kristopher Hall; David J Craik; Marie-Isabel Aguilar
Journal:  Anal Biochem       Date:  2005-02-01       Impact factor: 3.365

7.  Cytotoxic potency of small macrocyclic knot proteins: structure-activity and mechanistic studies of native and chemically modified cyclotides.

Authors:  Robert Burman; Anders Herrmann; Rossetti Tran; Jan-Erik Kivelä; Andrei Lomize; Joachim Gullbo; Ulf Göransson
Journal:  Org Biomol Chem       Date:  2011-04-13       Impact factor: 3.876

8.  Squash trypsin inhibitors from Momordica cochinchinensis exhibit an atypical macrocyclic structure.

Authors:  J F Hernandez; J Gagnon; L Chiche; T M Nguyen; J P Andrieu; A Heitz; T Trinh Hong; T T Pham; D Le Nguyen
Journal:  Biochemistry       Date:  2000-05-16       Impact factor: 3.162

9.  Discovery and characterization of a linear cyclotide from Viola odorata: implications for the processing of circular proteins.

Authors:  David C Ireland; Michelle L Colgrave; Philip Nguyencong; Norelle L Daly; David J Craik
Journal:  J Mol Biol       Date:  2006-02-02       Impact factor: 5.469

Review 10.  Anti-HIV cyclotides.

Authors:  Kirk R Gustafson; Tawnya C McKee; Heidi R Bokesch
Journal:  Curr Protein Pept Sci       Date:  2004-10       Impact factor: 3.272

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  24 in total

1.  Two Blast-independent tools, CyPerl and CyExcel, for harvesting hundreds of novel cyclotides and analogues from plant genomes and protein databases.

Authors:  Jun Zhang; Zhengshuang Hua; Zebo Huang; QiZhu Chen; Qingyun Long; David J Craik; Alan J M Baker; Wensheng Shu; Bin Liao
Journal:  Planta       Date:  2014-12-21       Impact factor: 4.116

2.  Butelase 1 is an Asx-specific ligase enabling peptide macrocyclization and synthesis.

Authors:  Giang K T Nguyen; Shujing Wang; Yibo Qiu; Xinya Hemu; Yilong Lian; James P Tam
Journal:  Nat Chem Biol       Date:  2014-07-20       Impact factor: 15.040

3.  Cyclotides associate with leaf vasculature and are the products of a novel precursor in petunia (Solanaceae).

Authors:  Aaron G Poth; Joshua S Mylne; Julia Grassl; Russell E Lyons; A Harvey Millar; Michelle L Colgrave; David J Craik
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

4.  A synthetic antimicrobial peptide BTD-S expressed in Arabidopsis thaliana confers enhanced resistance to Verticillium dahliae.

Authors:  Feng Li; Hao Shen; Ming Wang; Kai Fan; Noreen Bibi; Mi Ni; Shuna Yuan; Xuede Wang
Journal:  Mol Genet Genomics       Date:  2016-04-30       Impact factor: 3.291

5.  Butelase-mediated cyclization and ligation of peptides and proteins.

Authors:  Giang K T Nguyen; Yibo Qiu; Yuan Cao; Xinya Hemu; Chuan-Fa Liu; James P Tam
Journal:  Nat Protoc       Date:  2016-09-22       Impact factor: 13.491

6.  Prediction of Leymus arenarius (L.) antimicrobial peptides based on de novo transcriptome assembly.

Authors:  Anna A Slavokhotova; Andrey A Shelenkov; Tatyana I Odintsova
Journal:  Plant Mol Biol       Date:  2015-09-14       Impact factor: 4.076

7.  Cyclotide discovery in Gentianales revisited--identification and characterization of cyclic cystine-knot peptides and their phylogenetic distribution in Rubiaceae plants.

Authors:  Johannes Koehbach; Alfred F Attah; Andreas Berger; Roland Hellinger; Toni M Kutchan; Eric J Carpenter; Megan Rolf; Mubo A Sonibare; Jones O Moody; Gane Ka-Shu Wong; Steven Dessein; Harald Greger; Christian W Gruber
Journal:  Biopolymers       Date:  2013-09       Impact factor: 2.505

8.  Cyclotides insert into lipid bilayers to form membrane pores and destabilize the membrane through hydrophobic and phosphoethanolamine-specific interactions.

Authors:  Conan K Wang; Hanna P Wacklin; David J Craik
Journal:  J Biol Chem       Date:  2012-11-05       Impact factor: 5.157

9.  Discovery of linear cyclotides in monocot plant Panicum laxum of Poaceae family provides new insights into evolution and distribution of cyclotides in plants.

Authors:  Giang Kien Truc Nguyen; Yilong Lian; Edmund Weng Hou Pang; Phuong Quoc Thuc Nguyen; Tuan Dinh Tran; James P Tam
Journal:  J Biol Chem       Date:  2012-11-29       Impact factor: 5.157

Review 10.  Leveraging orthogonal mass spectrometry based strategies for comprehensive sequencing and characterization of ribosomal antimicrobial peptide natural products.

Authors:  Tessa B Moyer; Nicole C Parsley; Patric W Sadecki; Wyatt J Schug; Leslie M Hicks
Journal:  Nat Prod Rep       Date:  2020-09-15       Impact factor: 13.423

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