Literature DB >> 23194776

Sensitive and rapid detection of viruses associated with hand foot and mouth disease using multiplexed MALDI-TOF analysis.

Junping Peng1, Fan Yang, Zhaohui Xiong, Junhua Guo, Jiang Du, Yongfeng Hu, Qi Jin.   

Abstract

BACKGROUND: Human enterovirus (HEV) is the major cause of hand foot and mouth disease (HFMD). A powerful method for detecting HEVs associated with HFMD can provide results in a clinically relevant time frame. However, the limitations of the current enterovirus test make it difficult to identify multiple genotypes on the first pass.
OBJECTIVE: To develop a more sensitive and easy applicable assay for detecting 18 HFMD-associated HEV serotypes in multiplex PCR products. STUDY
DESIGN: : A total of 241 clinical specimens were collected from HFMD patients during the 2010 outbreak in China. These samples were tested by DNA sequencing and MassARRAY analysis, respectively.
RESULTS: Analysis of a dilution series of plasmids revealed the detection limit per PCR reaction for the MassARRAY method was one copy for the tested HEVs. We compared results from 241 samples to those of the sequence analysis of the VP1 gene. The MassARRAY method detected all samples found positive by consensus PCR and sequencing method. Comparison of the results of MassARRAY and the DNA sequencing method found concordant results for 225 (93.4%) of the 241 samples. In 14 (5.8%) samples, the MassARRAY method detected multiple types, whereas the DNA sequencing method detected a single type. In another 2 (0.8%) samples, the MassARRAY method detected single types, whereas the DNA sequencing method detected no HEV.
CONCLUSIONS: The MassARRAY assay is a highly sensitive and accurate method for the type-specific detection of 18 HEVs in HFMD and is a powerful complement to current detection methods.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 23194776     DOI: 10.1016/j.jcv.2012.10.020

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  16 in total

1.  Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) proteomic profiling of cerebrospinal fluid in the diagnosis of enteroviral meningitis: a proof-of-principle study.

Authors:  Ignacio Torres; Estela Giménez; Víctor Vinuesa; Tania Pascual; Juan Miguel Moya; Juan Alberola; Ana Martínez-Sapiña; David Navarro
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2018-09-27       Impact factor: 3.267

2.  MassARRAY, pyrosequencing, and PNA clamping for EGFR mutation detection in lung cancer tissue and cytological samples: a multicenter study.

Authors:  Kyueng-Whan Min; Wan-Seop Kim; Se Jin Jang; Yoo Duk Choi; Sunhee Chang; Soon Hee Jung; Lucia Kim; Mee-Sook Roh; Choong Sik Lee; Jung Weon Shim; Mi Jin Kim; Geon Kook Lee
Journal:  J Cancer Res Clin Oncol       Date:  2016-08-17       Impact factor: 4.553

3.  Prevalence of 10 human polyomaviruses in fecal samples from children with acute gastroenteritis: a case-control study.

Authors:  Ke Li; Junhua Guo; Rong Zhao; Ying Xue; Lihong Chen; Jian Yang; Junping Peng; Qi Jin
Journal:  J Clin Microbiol       Date:  2013-07-03       Impact factor: 5.948

4.  Application of Multiplex PCR Coupled with Matrix-Assisted Laser Desorption Ionization-Time of Flight Analysis for Simultaneous Detection of 21 Common Respiratory Viruses.

Authors:  Chi Zhang; Yan Xiao; Jiang Du; Lili Ren; Jianwei Wang; Junping Peng; Qi Jin
Journal:  J Clin Microbiol       Date:  2015-05-27       Impact factor: 5.948

5.  Type-specific detection of 30 oncogenic human papillomaviruses by genotyping both E6 and L1 genes.

Authors:  Junping Peng; Lei Gao; Junhua Guo; Ting Wang; Ling Wang; Qing Yao; Haijun Zhu; Qi Jin
Journal:  J Clin Microbiol       Date:  2012-11-14       Impact factor: 5.948

6.  A multisite SNP genotyping and macrolide susceptibility gene method for Mycoplasma pneumoniae based on MALDI-TOF MS.

Authors:  Fei Zhao; Jianzhong Zhang; Xuemei Wang; Liyong Liu; Jie Gong; Zhixiang Zhai; Lihua He; Fanliang Meng; Di Xiao
Journal:  iScience       Date:  2021-04-16

7.  Predicting the incidence of hand, foot and mouth disease in Sichuan province, China using the ARIMA model.

Authors:  L Liu; R S Luan; F Yin; X P Zhu; Q Lü
Journal:  Epidemiol Infect       Date:  2015-06-01       Impact factor: 4.434

8.  Establishment and Application of a Universal Coronavirus Screening Method Using MALDI-TOF Mass Spectrometry.

Authors:  Leshan Xiu; Chi Zhang; Zhiqiang Wu; Junping Peng
Journal:  Front Microbiol       Date:  2017-08-09       Impact factor: 5.640

Review 9.  MALDI-TOF mass spectrometry: an emerging technology for microbial identification and diagnosis.

Authors:  Neelja Singhal; Manish Kumar; Pawan K Kanaujia; Jugsharan S Virdi
Journal:  Front Microbiol       Date:  2015-08-05       Impact factor: 5.640

10.  Application of maldi-tof mass spectrometry in clinical virology: a review.

Authors:  Fernando Cobo
Journal:  Open Virol J       Date:  2013-09-27
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