Literature DB >> 23192255

Controlling the function of DNA nanostructures with specific trigger sequences.

Stijn Deborggraeve1, Jian Yuan Dai, Yi Xiao, Hyongsok Tom Soh.   

Abstract

We report a hybridization-based switching mechanism with single-base specificity that can be readily integrated with functional DNA nanostructures. As an exemplar, we have developed a switchable DNAzyme (SDZ) that only becomes activated in the presence of a perfectly matched trigger sequence and operates effectively at room temperature.

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Year:  2012        PMID: 23192255      PMCID: PMC3552611          DOI: 10.1039/c2cc36878a

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  17 in total

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Authors:  Nadrian C Seeman
Journal:  Nature       Date:  2003-01-23       Impact factor: 49.962

2.  A synthetic DNA walker for molecular transport.

Authors:  Jong-Shik Shin; Niles A Pierce
Journal:  J Am Chem Soc       Date:  2004-09-08       Impact factor: 15.419

3.  Triggered amplification by hybridization chain reaction.

Authors:  Robert M Dirks; Niles A Pierce
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-18       Impact factor: 11.205

4.  In vitro selection of RNA molecules that bind specific ligands.

Authors:  A D Ellington; J W Szostak
Journal:  Nature       Date:  1990-08-30       Impact factor: 49.962

5.  A nanomechanical device based on the B-Z transition of DNA.

Authors:  C Mao; W Sun; Z Shen; N C Seeman
Journal:  Nature       Date:  1999-01-14       Impact factor: 49.962

6.  A general purpose RNA-cleaving DNA enzyme.

Authors:  S W Santoro; G F Joyce
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-29       Impact factor: 11.205

7.  Dissociation kinetics of 19 base paired oligonucleotide-DNA duplexes containing different single mismatched base pairs.

Authors:  S Ikuta; K Takagi; R B Wallace; K Itakura
Journal:  Nucleic Acids Res       Date:  1987-01-26       Impact factor: 16.971

8.  Molecular computation of solutions to combinatorial problems.

Authors:  L M Adleman
Journal:  Science       Date:  1994-11-11       Impact factor: 47.728

9.  Nucleic acid junctions and lattices.

Authors:  N C Seeman
Journal:  J Theor Biol       Date:  1982-11-21       Impact factor: 2.691

10.  A DNA enzyme that cleaves RNA.

Authors:  R R Breaker; G F Joyce
Journal:  Chem Biol       Date:  1994-12
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  1 in total

1.  Single-molecule study of the effects of temperature, pH, and RNA base on the stepwise enzyme kinetics of 10-23 deoxyribozyme.

Authors:  Jiwon Jung; Seon Yong Kim; Seong Keun Kim
Journal:  RSC Adv       Date:  2022-05-18       Impact factor: 4.036

  1 in total

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