Literature DB >> 23192037

Crystallization and preliminary X-ray crystallographic analysis of human Apaf-1-interacting protein.

Wonchull Kang1, Jin Kuk Yang.   

Abstract

Apaf-1-interacting protein (APIP) is known to inhibit two different types of cell death: caspase-1-dependent pyroptosis and caspase-9-dependent apoptosis. APIP is also involved in the methionine-salvage pathway, where it is called 5-methylthioribulose-1-phosphate dehydratase (MtnB). The enzyme activity seems to be essential for inhibition of pyroptosis by APIP, but not for inhibition of apoptosis. In this study, human APIP was overproduced in Escherichia coli, purified and crystallized. An X-ray diffraction data set was collected to 2.40 Å resolution and the crystals belonged to space group C222(1), with unit-cell parameters a=106.61, b=107.50, c=189.76 Å. Given that four APIP molecules exist in the asymmetric unit, the Matthews coefficient is 2.70 Å3 Da(-1) and the corresponding solvent content is 54.4%.

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Year:  2012        PMID: 23192037      PMCID: PMC3509978          DOI: 10.1107/S1744309112042832

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  5 in total

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Authors:  Jeyaraman Jeyakanthan; Junichiro Taka; Akihiro Kikuchi; Chizu Kuroishi; Katsuhide Yutani; Yoshitugu Shiro
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-11-24

2.  Suppression of hypoxic cell death by APIP-induced sustained activation of AKT and ERK1/2.

Authors:  D-H Cho; H-J Lee; H-J Kim; S-H Hong; J-O Pyo; C Cho; Y-K Jung
Journal:  Oncogene       Date:  2006-11-06       Impact factor: 9.867

3.  Induced inhibition of ischemic/hypoxic injury by APIP, a novel Apaf-1-interacting protein.

Authors:  Dong-Hyung Cho; Yeon-Mi Hong; Ho-June Lee; Ha-Na Woo; Jong-Ok Pyo; Tak W Mak; Yong-Keun Jung
Journal:  J Biol Chem       Date:  2004-07-15       Impact factor: 5.157

4.  Functional genetic screen of human diversity reveals that a methionine salvage enzyme regulates inflammatory cell death.

Authors:  Dennis C Ko; Eric R Gamazon; Kajal P Shukla; Richard A Pfuetzner; Dale Whittington; Tarah D Holden; Mitchell J Brittnacher; Christine Fong; Matthew Radey; Cassandra Ogohara; Amy L Stark; Joshua M Akey; M Eileen Dolan; Mark M Wurfel; Samuel I Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-25       Impact factor: 11.205

5.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
  5 in total
  1 in total

1.  Structural and biochemical basis for the inhibition of cell death by APIP, a methionine salvage enzyme.

Authors:  Wonchull Kang; Se Hoon Hong; Hye Min Lee; Na Yeon Kim; Yun Chan Lim; Le Thi My Le; Bitna Lim; Hyun Chul Kim; Tae Yeon Kim; Hiroki Ashida; Akiho Yokota; Sang Soo Hah; Keun Ho Chun; Yong-Keun Jung; Jin Kuk Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-23       Impact factor: 11.205

  1 in total

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