Literature DB >> 23181305

Core and valence excitations in resonant X-ray spectroscopy using restricted excitation window time-dependent density functional theory.

Yu Zhang1, Jason D Biggs, Daniel Healion, Niranjan Govind, Shaul Mukamel.   

Abstract

We report simulations of X-ray absorption near edge structure (XANES), resonant inelastic X-ray scattering (RIXS) and 1D stimulated X-ray Raman spectroscopy (SXRS) signals of cysteine at the oxygen, nitrogen, and sulfur K and L(2,3) edges. Comparison of the simulated XANES signals with experiment shows that the restricted window time-dependent density functional theory is more accurate and computationally less expensive than the static exchange method. Simulated RIXS and 1D SXRS signals give some insights into the correlation of different excitations in the molecule.

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Year:  2012        PMID: 23181305      PMCID: PMC3517496          DOI: 10.1063/1.4766356

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  46 in total

1.  Time-dependent density functional theory calculations of the spectroscopy of core electrons.

Authors:  Nicholas A Besley; Frans A Asmuruf
Journal:  Phys Chem Chem Phys       Date:  2010-08-16       Impact factor: 3.676

2.  Single-reference ab initio methods for the calculation of excited states of large molecules.

Authors:  Andreas Dreuw; Martin Head-Gordon
Journal:  Chem Rev       Date:  2005-11       Impact factor: 60.622

3.  Nonlinear response theory with relaxation: the first-order hyperpolarizability.

Authors:  Patrick Norman; David M Bishop; Hans Jørgen Aa Jensen; Jens Oddershede
Journal:  J Chem Phys       Date:  2005-11-15       Impact factor: 3.488

4.  Hybrid exchange-correlation functional for core, valence, and Rydberg excitations: core-valence-Rydberg B3LYP.

Authors:  Ayako Nakata; Yutaka Imamura; Hiromi Nakai
Journal:  J Chem Phys       Date:  2006-08-14       Impact factor: 3.488

5.  Innershell absorption spectroscopy of amino acids at all relevant absorption edges.

Authors:  Yan Zubavichus; Andrey Shaporenko; Michael Grunze; Michael Zharnikov
Journal:  J Phys Chem A       Date:  2005-08-18       Impact factor: 2.781

6.  Time-dependent density functional theory calculations for core-excited states: assessment of standard exchange-correlation functionals and development of a novel hybrid functional.

Authors:  Ayako Nakata; Yutaka Imamura; Takao Otsuka; Hiromi Nakai
Journal:  J Chem Phys       Date:  2006-03-07       Impact factor: 3.488

7.  PSI3: an open-source Ab Initio electronic structure package.

Authors:  T Daniel Crawford; C David Sherrill; Edward F Valeev; Justin T Fermann; Rollin A King; Matthew L Leininger; Shawn T Brown; Curtis L Janssen; Edward T Seidl; Joseph P Kenny; Wesley D Allen
Journal:  J Comput Chem       Date:  2007-07-15       Impact factor: 3.376

8.  Probing multiple core-hole interactions in the nitrogen K-edge of DNA base pairs by multidimensional attosecond X-ray spectroscopy. A simulation study.

Authors:  Daniel M Healion; Igor V Schweigert; Shaul Mukamel
Journal:  J Phys Chem A       Date:  2008-10-18       Impact factor: 2.781

9.  Complex polarization propagator approach in the restricted open-shell, self-consistent field approximation: the near K-edge X-ray absorption fine structure spectra of allyl and copper phthalocyanine.

Authors:  Mathieu Linares; Sven Stafström; Zilvinas Rinkevicius; Hans Ågren; Patrick Norman
Journal:  J Phys Chem B       Date:  2010-07-08       Impact factor: 2.991

10.  Calculation of near-edge x-ray-absorption fine structure at finite temperatures: spectral signatures of hydrogen bond breaking in liquid water.

Authors:  Balázs Hetényi; Filippo De Angelis; Paolo Giannozzi; Roberto Car
Journal:  J Chem Phys       Date:  2004-05-08       Impact factor: 3.488

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  15 in total

1.  Watching energy transfer in metalloporphyrin heterodimers using stimulated X-ray Raman spectroscopy.

Authors:  Jason D Biggs; Yu Zhang; Daniel Healion; Shaul Mukamel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

2.  Double-core excitations in formamide can be probed by X-ray double-quantum-coherence spectroscopy.

Authors:  Yu Zhang; Daniel Healion; Jason D Biggs; Shaul Mukamel
Journal:  J Chem Phys       Date:  2013-04-14       Impact factor: 3.488

3.  Multidimensional x-ray spectroscopy of valence and core excitations in cysteine.

Authors:  Jason D Biggs; Yu Zhang; Daniel Healion; Shaul Mukamel
Journal:  J Chem Phys       Date:  2013-04-14       Impact factor: 3.488

4.  Time-, frequency-, and wavevector-resolved x-ray diffraction from single molecules.

Authors:  Kochise Bennett; Jason D Biggs; Yu Zhang; Konstantin E Dorfman; Shaul Mukamel
Journal:  J Chem Phys       Date:  2014-05-28       Impact factor: 3.488

5.  Understanding Excitation Energy Transfer in Metalloporphyrin Heterodimers with Different Linkers, Bonding Structures and Geometries through Stimulated X-Ray Raman Spectroscopy.

Authors:  Yu Zhang; Jason D Biggs; Shaul Mukamel
Journal:  J Mod Opt       Date:  2014-01-01       Impact factor: 1.464

Review 6.  Multidimensional attosecond resonant X-ray spectroscopy of molecules: lessons from the optical regime.

Authors:  Shaul Mukamel; Daniel Healion; Yu Zhang; Jason D Biggs
Journal:  Annu Rev Phys Chem       Date:  2012-12-10       Impact factor: 12.703

7.  Nonlinear light scattering in molecules triggered by an impulsive X-ray Raman process.

Authors:  Konstantin E Dorfman; Kochise Bennett; Yu Zhang; Shaul Mukamel
Journal:  Phys Rev A       Date:  2013-05-01       Impact factor: 3.140

8.  Multiple Core and Vibronic Coupling Effects in Attosecond Stimulated X-Ray Raman Spectroscopy (SXRS).

Authors:  Weijie Hua; Jason D Biggs; Yu Zhang; Daniel Healion; Hao Ren; Shaul Mukamel
Journal:  J Chem Theory Comput       Date:  2013-12-10       Impact factor: 6.006

9.  Two-dimensional x-ray correlation spectroscopy of remote core states.

Authors:  Daniel Healion; Yu Zhang; Jason D Biggs; Weijie Hua; Shaul Mukamel
Journal:  Struct Dyn       Date:  2013-12-18       Impact factor: 2.920

10.  Spectromicroscopy of C60 and azafullerene C59N: Identifying surface adsorbed water.

Authors:  Dogan Erbahar; Toma Susi; Xavier Rocquefelte; Carla Bittencourt; Mattia Scardamaglia; Peter Blaha; Peter Guttmann; Georgios Rotas; Nikos Tagmatarchis; Xiaohui Zhu; Adam P Hitchcock; Chris P Ewels
Journal:  Sci Rep       Date:  2016-10-17       Impact factor: 4.379

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