Literature DB >> 23178594

The SOSS1 single-stranded DNA binding complex promotes DNA end resection in concert with Exo1.

Soo-Hyun Yang1, Ruobo Zhou, Judith Campbell, Junjie Chen, Taekjip Ha, Tanya T Paull.   

Abstract

The human SSB homologue 1 (hSSB1) has been shown to facilitate homologous recombination and double-strand break signalling in human cells. Here, we compare the DNA-binding properties of the SOSS1 complex, containing SSB1, with Replication Protein A (RPA), the primary single-strand DNA (ssDNA) binding complex in eukaryotes. Ensemble and single-molecule approaches show that SOSS1 binds ssDNA with lower affinity compared to RPA, and exhibits less stable interactions with DNA substrates. Nevertheless, the SOSS1 complex is uniquely capable of promoting interaction of human Exo1 with double-strand DNA ends and stimulates its activity independently of the MRN complex in vitro. Both MRN and SOSS1 also act to mitigate the inhibitory action of the Ku70/80 heterodimer on Exo1 activity in vitro. These results may explain why SOSS complexes do not localize with RPA to replication sites in human cells, yet have a strong effect on double-strand break resection and homologous recombination.

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Year:  2012        PMID: 23178594      PMCID: PMC3545304          DOI: 10.1038/emboj.2012.314

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  54 in total

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Journal:  Nature       Date:  2002-10-10       Impact factor: 49.962

2.  Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy.

Authors:  M C Murphy; Ivan Rasnik; Wei Cheng; Timothy M Lohman; Taekjip Ha
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

Review 3.  EXO1-A multi-tasking eukaryotic nuclease.

Authors:  Phuoc T Tran; Naz Erdeniz; Lorraine S Symington; R Michael Liskay
Journal:  DNA Repair (Amst)       Date:  2004-12-02

Review 4.  Double-strand break end resection and repair pathway choice.

Authors:  Lorraine S Symington; Jean Gautier
Journal:  Annu Rev Genet       Date:  2011-09-12       Impact factor: 16.830

5.  Molecular interactions of human Exo1 with DNA.

Authors:  Byung-in Lee Bi; Lam H Nguyen; Daniel Barsky; Mike Fernandes; David M Wilson
Journal:  Nucleic Acids Res       Date:  2002-02-15       Impact factor: 16.971

6.  Structure of the RPA trimerization core and its role in the multistep DNA-binding mechanism of RPA.

Authors:  Elena Bochkareva; Sergey Korolev; Susan P Lees-Miller; Alexey Bochkarev
Journal:  EMBO J       Date:  2002-04-02       Impact factor: 11.598

7.  The RAD2 domain of human exonuclease 1 exhibits 5' to 3' exonuclease and flap structure-specific endonuclease activities.

Authors:  B I Lee; D M Wilson
Journal:  J Biol Chem       Date:  1999-12-31       Impact factor: 5.157

8.  Specific photocrosslinking of DNA-protein complexes: identification of contacts between integration host factor and its target DNA.

Authors:  S W Yang; H A Nash
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-06       Impact factor: 11.205

Review 9.  Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities.

Authors:  T M Lohman; M E Ferrari
Journal:  Annu Rev Biochem       Date:  1994       Impact factor: 23.643

10.  Proteolytic mapping of human replication protein A: evidence for multiple structural domains and a conformational change upon interaction with single-stranded DNA.

Authors:  X V Gomes; L A Henricksen; M S Wold
Journal:  Biochemistry       Date:  1996-04-30       Impact factor: 3.162

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  46 in total

1.  14-3-3 proteins restrain the Exo1 nuclease to prevent overresection.

Authors:  Xiaoqing Chen; In-Kwon Kim; Yuchi Honaker; Sharad C Paudyal; Won Kyun Koh; Melanie Sparks; Shan Li; Helen Piwnica-Worms; Tom Ellenberger; Zhongsheng You
Journal:  J Biol Chem       Date:  2015-04-01       Impact factor: 5.157

Review 2.  The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries.

Authors:  Sonja-Verena Albers; Patrick Forterre; David Prangishvili; Christa Schleper
Journal:  Nat Rev Microbiol       Date:  2013-10       Impact factor: 60.633

3.  Visualization of local DNA unwinding by Mre11/Rad50/Nbs1 using single-molecule FRET.

Authors:  Brian Cannon; Jeffrey Kuhnlein; Soo-Hyun Yang; Anita Cheng; Detlev Schindler; Jeremy M Stark; Rick Russell; Tanya T Paull
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-04       Impact factor: 11.205

4.  Interplay between Ku and Replication Protein A in the Restriction of Exo1-mediated DNA Break End Resection.

Authors:  Danielle S Krasner; James M Daley; Patrick Sung; Hengyao Niu
Journal:  J Biol Chem       Date:  2015-06-11       Impact factor: 5.157

5.  Elucidation of IgH 3' region regulatory role during class switch recombination via germline deletion.

Authors:  Alexis Saintamand; Pauline Rouaud; Faten Saad; Géraldine Rios; Michel Cogné; Yves Denizot
Journal:  Nat Commun       Date:  2015-05-11       Impact factor: 14.919

6.  RPA Phosphorylation Inhibits DNA Resection.

Authors:  Michael M Soniat; Logan R Myler; Hung-Che Kuo; Tanya T Paull; Ilya J Finkelstein
Journal:  Mol Cell       Date:  2019-05-29       Impact factor: 17.970

7.  Poly(ADP-ribose)-binding promotes Exo1 damage recruitment and suppresses its nuclease activities.

Authors:  Abigael Cheruiyot; Sharad C Paudyal; In-Kwon Kim; Melanie Sparks; Tom Ellenberger; Helen Piwnica-Worms; Zhongsheng You
Journal:  DNA Repair (Amst)       Date:  2015-09-30

Review 8.  Eukaryotic resectosomes: A single-molecule perspective.

Authors:  Logan R Myler; Ilya J Finkelstein
Journal:  Prog Biophys Mol Biol       Date:  2016-08-03       Impact factor: 3.667

Review 9.  53BP1, BRCA1, and the choice between recombination and end joining at DNA double-strand breaks.

Authors:  James M Daley; Patrick Sung
Journal:  Mol Cell Biol       Date:  2014-01-27       Impact factor: 4.272

10.  Single-Molecule Imaging Reveals How Mre11-Rad50-Nbs1 Initiates DNA Break Repair.

Authors:  Logan R Myler; Ignacio F Gallardo; Michael M Soniat; Rajashree A Deshpande; Xenia B Gonzalez; Yoori Kim; Tanya T Paull; Ilya J Finkelstein
Journal:  Mol Cell       Date:  2017-08-31       Impact factor: 17.970

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