Literature DB >> 23177191

The emerging world of synthetic genetics.

John C Chaput1, Hanyang Yu, Su Zhang.   

Abstract

For over 20 years, laboratories around the world have been applying the principles of Darwinian evolution to isolate DNA and RNA molecules with specific ligand-binding or catalytic activities. This area of synthetic biology, commonly referred to as in vitro genetics, is made possible by the availability of natural polymerases that can replicate genetic information in the laboratory. Moving beyond natural nucleic acids requires organic chemistry to synthesize unnatural analogues and polymerase engineering to create enzymes that recognize artificial substrates. Progress in both of these areas has led to the emerging field of synthetic genetics, which explores the structural and functional properties of synthetic genetic polymers by in vitro evolution. This review examines recent advances in the Darwinian evolution of artificial genetic polymers and their potential downstream applications in exobiology, molecular medicine, and synthetic biology.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23177191     DOI: 10.1016/j.chembiol.2012.10.011

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  26 in total

Review 1.  Beyond DNA and RNA: The Expanding Toolbox of Synthetic Genetics.

Authors:  Alexander I Taylor; Gillian Houlihan; Philipp Holliger
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

Review 2.  Exoplanet Biosignatures: Future Directions.

Authors:  Sara I Walker; William Bains; Leroy Cronin; Shiladitya DasSarma; Sebastian Danielache; Shawn Domagal-Goldman; Betul Kacar; Nancy Y Kiang; Adrian Lenardic; Christopher T Reinhard; William Moore; Edward W Schwieterman; Evgenya L Shkolnik; Harrison B Smith
Journal:  Astrobiology       Date:  2018-06       Impact factor: 4.335

3.  Understanding the Molecular Basis of RNA Polymerase II Transcription.

Authors:  Su Zhang; Dong Wang
Journal:  Isr J Chem       Date:  2013-06       Impact factor: 3.333

Review 4.  Synthetic transitions: towards a new synthesis.

Authors:  Ricard Solé
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-08-19       Impact factor: 6.237

5.  Fluorescence-Activated Droplet Sorting for Single-Cell Directed Evolution.

Authors:  Derek Vallejo; Ali Nikoomanzar; Brian M Paegel; John C Chaput
Journal:  ACS Synth Biol       Date:  2019-05-23       Impact factor: 5.110

Review 6.  Engineering reduced evolutionary potential for synthetic biology.

Authors:  Brian A Renda; Michael J Hammerling; Jeffrey E Barrick
Journal:  Mol Biosyst       Date:  2014-02-21

7.  Functional interplay between NTP leaving group and base pair recognition during RNA polymerase II nucleotide incorporation revealed by methylene substitution.

Authors:  Candy S Hwang; Liang Xu; Wei Wang; Sébastien Ulrich; Lu Zhang; Jenny Chong; Ji Hyun Shin; Xuhui Huang; Eric T Kool; Charles E McKenna; Dong Wang
Journal:  Nucleic Acids Res       Date:  2016-04-07       Impact factor: 16.971

Review 8.  The expanded genetic alphabet.

Authors:  Denis A Malyshev; Floyd E Romesberg
Journal:  Angew Chem Int Ed Engl       Date:  2015-08-25       Impact factor: 15.336

9.  A Tool for the Import of Natural and Unnatural Nucleoside Triphosphates into Bacteria.

Authors:  Aaron W Feldman; Emil C Fischer; Michael P Ledbetter; Jen-Yu Liao; John C Chaput; Floyd E Romesberg
Journal:  J Am Chem Soc       Date:  2018-01-17       Impact factor: 15.419

10.  Dissecting the chemical interactions and substrate structural signatures governing RNA polymerase II trigger loop closure by synthetic nucleic acid analogues.

Authors:  Liang Xu; Kyle Vincent Butler; Jenny Chong; Jesper Wengel; Eric T Kool; Dong Wang
Journal:  Nucleic Acids Res       Date:  2014-04-01       Impact factor: 16.971

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