Literature DB >> 23172232

Digitally programmable microfluidic automaton for multiscale combinatorial mixing and sample processing.

Erik C Jensen1, Amanda M Stockton, Thomas N Chiesl, Jungkyu Kim, Abhisek Bera, Richard A Mathies.   

Abstract

A digitally programmable microfluidic Automaton consisting of a 2-dimensional array of pneumatically actuated microvalves is programmed to perform new multiscale mixing and sample processing operations. Large (μL-scale) volume processing operations are enabled by precise metering of multiple reagents within individual nL-scale valves followed by serial repetitive transfer to programmed locations in the array. A novel process exploiting new combining valve concepts is developed for continuous rapid and complete mixing of reagents in less than 800 ms. Mixing, transfer, storage, and rinsing operations are implemented combinatorially to achieve complex assay automation protocols. The practical utility of this technology is demonstrated by performing automated serial dilution for quantitative analysis as well as the first demonstration of on-chip fluorescent derivatization of biomarker targets (carboxylic acids) for microchip capillary electrophoresis on the Mars Organic Analyzer. A language is developed to describe how unit operations are combined to form a microfluidic program. Finally, this technology is used to develop a novel microfluidic 6-sample processor for combinatorial mixing of large sets (>2(6) unique combinations) of reagents. The digitally programmable microfluidic Automaton is a versatile programmable sample processor for a wide range of process volumes, for multiple samples, and for different types of analyses.

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Year:  2012        PMID: 23172232      PMCID: PMC3568922          DOI: 10.1039/c2lc40861a

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  31 in total

1.  Solving the "world-to-chip" interface problem with a microfluidic matrix.

Authors:  Jian Liu; Carl Hansen; Stephen R Quake
Journal:  Anal Chem       Date:  2003-09-15       Impact factor: 6.986

2.  Microfluidic large-scale integration.

Authors:  Todd Thorsen; Sebastian J Maerkl; Stephen R Quake
Journal:  Science       Date:  2002-09-26       Impact factor: 47.728

3.  Dual-domain microchip-based process for volume reduction solid phase extraction of nucleic acids from dilute, large volume biological samples.

Authors:  Carmen R Reedy; Kristin A Hagan; Briony C Strachan; Joshua J Higginson; Joan M Bienvenue; Susan A Greenspoon; Jerome P Ferrance; James P Landers
Journal:  Anal Chem       Date:  2010-07-01       Impact factor: 6.986

4.  Analysis of carbonaceous biomarkers with the Mars Organic Analyzer microchip capillary electrophoresis system: aldehydes and ketones.

Authors:  Amanda M Stockton; Caroline Chandra Tjin; Grace L Huang; Merwan Benhabib; Thomas N Chiesl; Richard A Mathies
Journal:  Electrophoresis       Date:  2010-10-21       Impact factor: 3.535

Review 5.  Reactions in droplets in microfluidic channels.

Authors:  Helen Song; Delai L Chen; Rustem F Ismagilov
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-13       Impact factor: 15.336

6.  Microfluidic chip for combinatorial mixing and screening of assays.

Authors:  Benjamin R Schudel; Charles J Choi; Brian T Cunningham; Paul J A Kenis
Journal:  Lab Chip       Date:  2009-04-09       Impact factor: 6.799

7.  Achieving accurate compound concentration in cell-based screening: validation of acoustic droplet ejection technology.

Authors:  Richard John Grant; Karen Roberts; Carly Pointon; Clare Hodgson; Lynsey Womersley; Darren Craig Jones; Eric Tang
Journal:  J Biomol Screen       Date:  2009-06-04

8.  Immunomagnetic bead-based cell concentration microdevice for dilute pathogen detection.

Authors:  Nathaniel Beyor; Tae Seok Seo; Peng Liu; Richard A Mathies
Journal:  Biomed Microdevices       Date:  2008-12       Impact factor: 2.838

9.  A digital microfluidic platform for the automation of quantitative biomolecular assays.

Authors:  Erik C Jensen; Bharath P Bhat; Richard A Mathies
Journal:  Lab Chip       Date:  2009-12-23       Impact factor: 6.799

10.  DNA-barcode directed capture and electrochemical metabolic analysis of single mammalian cells on a microelectrode array.

Authors:  Erik S Douglas; Sonny C Hsiao; Hiroaki Onoe; Carolyn R Bertozzi; Matthew B Francis; Richard A Mathies
Journal:  Lab Chip       Date:  2009-04-15       Impact factor: 6.799

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  13 in total

1.  A novel wide-range microfluidic dilution device for drug screening.

Authors:  Cong Wang; Shikun Zhao; Xianglong Zhao; Luan Chen; Zhengan Tian; Xiang Chen; Shengying Qin
Journal:  Biomicrofluidics       Date:  2019-03-22       Impact factor: 2.800

2.  Integration of programmable microfluidics and on-chip fluorescence detection for biosensing applications.

Authors:  J W Parks; M A Olson; J Kim; D Ozcelik; H Cai; R Carrion; J L Patterson; R A Mathies; A R Hawkins; H Schmidt
Journal:  Biomicrofluidics       Date:  2014-09-30       Impact factor: 2.800

3.  Reconfigurable microfluidic dilution for high-throughput quantitative assays.

Authors:  Jinzhen Fan; Baoqing Li; Siyuan Xing; Tingrui Pan
Journal:  Lab Chip       Date:  2015-06-21       Impact factor: 6.799

Review 4.  Micro total analysis systems: fundamental advances and biological applications.

Authors:  Christopher T Culbertson; Tom G Mickleburgh; Samantha A Stewart-James; Kathleen A Sellens; Melissa Pressnall
Journal:  Anal Chem       Date:  2013-12-13       Impact factor: 6.986

5.  Towards combinatorial mixing devices without any pumps by open-capillary channels: fundamentals and applications.

Authors:  Marie Tani; Ryuji Kawano; Koki Kamiya; Ko Okumura
Journal:  Sci Rep       Date:  2015-06-23       Impact factor: 4.379

6.  Automated long-term monitoring of parallel microfluidic operations applying a machine vision-assisted positioning method.

Authors:  Hon Ming Yip; John C S Li; Kai Xie; Xin Cui; Agrim Prasad; Qiannan Gao; Chi Chiu Leung; Raymond H W Lam
Journal:  ScientificWorldJournal       Date:  2014-07-15

7.  Single-Layered Microfluidic Network-Based Combinatorial Dilution for Standard Simplex Lattice Design.

Authors:  Kangsun Lee; Choong Kim; Kwang W Oh
Journal:  Micromachines (Basel)       Date:  2018-09-25       Impact factor: 2.891

Review 8.  Microfluidic three-dimensional cell culture of stem cells for high-throughput analysis.

Authors:  Jeong Ah Kim; Soohyun Hong; Won Jong Rhee
Journal:  World J Stem Cells       Date:  2019-10-26       Impact factor: 5.326

9.  Automated microfluidic platform for dynamic and combinatorial drug screening of tumor organoids.

Authors:  Brooke Schuster; Michael Junkin; Sara Saheb Kashaf; Isabel Romero-Calvo; Kori Kirby; Jonathan Matthews; Christopher R Weber; Andrey Rzhetsky; Kevin P White; Savaş Tay
Journal:  Nat Commun       Date:  2020-10-19       Impact factor: 14.919

10.  End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis.

Authors:  Gregory Linshiz; Erik Jensen; Nina Stawski; Changhao Bi; Nick Elsbree; Hong Jiao; Jungkyu Kim; Richard Mathies; Jay D Keasling; Nathan J Hillson
Journal:  J Biol Eng       Date:  2016-02-02       Impact factor: 4.355

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