Literature DB >> 23160959

Sousse, Tunisia: tumultuous history and high Y-STR diversity.

Karima Fadhlaoui-Zid1, Shilpa Chennakrishnaiah, Ramzi Zemni, Sagy Grinberg, Rene J Herrera, Amel Benammar-Elgaaied.   

Abstract

In the present study, 17 Y-chromosomal STR (Y-STR) loci were typed in 218 unrelated males from Sousse, Central-East Tunisia, to evaluate forensic and population genetic applications of the data. A total of 154 different haplotypes were identified, 127 (82.5%) of which were unique, with the most frequent haplotype occurring in 14 individuals (6.4%). The locus diversity ranged from 0.2050 at DYS392 to 0.8760 at DYS385. The haplotype diversity at the 17-loci resolution was calculated to be 0.9916, while the corresponding values for the extended (11 loci) and minimal (9 loci) haplotypes were estimated at 0.9735 and 0.9710, respectively. Comparison with 29 regional and global populations using correspondence analysis, neighbor joining (NJ) tree, and Rst genetic distance revealed that the Sousse population is highly diverse. This finding is consistent with historical data. Furthermore, the results of this study indicate a distinct genetic substructure among Tunisian populations. In conclusion, the present study demonstrated that the 17 Y-STRs analyzed are highly informative for individual identification, parentage analysis, and population genetic studies.
© 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Mesh:

Year:  2012        PMID: 23160959     DOI: 10.1002/elps.201200361

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  3 in total

1.  Sousse: extreme genetic heterogeneity in North Africa.

Authors:  Karima Fadhlaoui-Zid; Ralph Garcia-Bertrand; Miguel A Alfonso-Sánchez; Ramzi Zemni; Amel Benammar-Elgaaied; Rene J Herrera
Journal:  J Hum Genet       Date:  2014-12-04       Impact factor: 3.172

2.  Case report: on the use of the HID-Ion AmpliSeq™ Ancestry Panel in a real forensic case.

Authors:  C Hollard; C Keyser; T Delabarde; A Gonzalez; C Vilela Lamego; V Zvénigorosky; B Ludes
Journal:  Int J Legal Med       Date:  2016-07-28       Impact factor: 2.686

3.  Are polymorphisms of the immunoregulatory factor CD40LG implicated in acute transfusion reactions?

Authors:  Chaker Aloui; Caroline Sut; Antoine Prigent; Jocelyne Fagan; Fabrice Cognasse; Viviana Granados-Herbepin; Renaud Touraine; Bruno Pozzetto; Mahjoub Aouni; Chedlia Fendri; Mohsen Hassine; Tahar Chakroun; Saloua Jemni-Yacoub; Olivier Garraud; Sandrine Laradi
Journal:  Sci Rep       Date:  2014-11-28       Impact factor: 4.379

  3 in total

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