Literature DB >> 23158498

Investigation of disease outbreaks with genome sequencing.

Jennifer L Gardy1.   

Abstract

Mesh：

Year:  2012        PMID： 23158498     DOI： 10.1016/S1473-3099(12)70295-5

Source DB:  PubMed          Journal:  Lancet Infect Dis        ISSN： 1473-3099            Impact factor:   25.071


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  7 in total

1.  Whole-genome sequencing for outbreak investigations of methicillin-resistant Staphylococcus aureus in the neonatal intensive care unit: time for routine practice?

Authors:  Taj Azarian; Robert L Cook; Judith A Johnson; Nilmarie Guzman; Yvette S McCarter; Noel Gomez; Mobeen H Rathore; J Glenn Morris; Marco Salemi
Journal:  Infect Control Hosp Epidemiol       Date:  2015-05-08       Impact factor: 3.254

2.  Tracking a tuberculosis outbreak over 21 years: strain-specific single-nucleotide polymorphism typing combined with targeted whole-genome sequencing.

Authors:  David Stucki; Marie Ballif; Thomas Bodmer; Mireia Coscolla; Anne-Marie Maurer; Sara Droz; Christa Butz; Sonia Borrell; Christel Längle; Julia Feldmann; Hansjakob Furrer; Carlo Mordasini; Peter Helbling; Hans L Rieder; Matthias Egger; Sébastien Gagneux; Lukas Fenner
Journal:  J Infect Dis       Date:  2014-10-30       Impact factor: 5.226

3.  KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes.

Authors:  Andreas Steiner; David Stucki; Mireia Coscolla; Sonia Borrell; Sebastien Gagneux
Journal:  BMC Genomics       Date:  2014-10-09       Impact factor: 3.969

4.  Automated IS6110-based fingerprinting of Mycobacterium tuberculosis: Reaching unprecedented discriminatory power and versatility.

Authors:  Naira Dekhil; Mohamed Amine Skhairia; Besma Mhenni; Saloua Ben Fradj; Rob Warren; Helmi Mardassi
Journal:  PLoS One       Date:  2018-06-01       Impact factor: 3.240

5.  How the dynamics and structure of sexual contact networks shape pathogen phylogenies.

Authors:  Katy Robinson; Nick Fyson; Ted Cohen; Christophe Fraser; Caroline Colijn
Journal:  PLoS Comput Biol       Date:  2013-06-20       Impact factor: 4.475

6.  Whole-exome sequencing supports genetic heterogeneity in childhood apraxia of speech.

Authors:  Elizabeth A Worthey; Gordana Raca; Jennifer J Laffin; Brandon M Wilk; Jeremy M Harris; Kathy J Jakielski; David P Dimmock; Edythe A Strand; Lawrence D Shriberg
Journal:  J Neurodev Disord       Date:  2013-10-02       Impact factor: 4.025

7.  Genomic epidemiology of Neisseria gonorrhoeae with reduced susceptibility to cefixime in the USA: a retrospective observational study.

Authors:  Yonatan H Grad; Robert D Kirkcaldy; David Trees; Janina Dordel; Simon R Harris; Edward Goldstein; Hillard Weinstock; Julian Parkhill; William P Hanage; Stephen Bentley; Marc Lipsitch
Journal:  Lancet Infect Dis       Date:  2014-01-22       Impact factor: 25.071
  7 in total

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