Literature DB >> 2315041

Synthesis and properties of dithymidine phosphate analogues containing 3'-thiothymidine.

R Cosstick1, J S Vyle.   

Abstract

Dithymidine-3'-S-phosphorothioate (d(TspT)) has been prepared from a 5'-O-monomethoxytritylthymidine-3'-S-phosphorothioamidite (7) by activation with 5-(p-nitrophenyl)tetrazole in the presence of 3'-O-acetylthymidine. The resulting dinucleoside phosphorothioite is readily oxidised to the corresponding 3'-S-phosphorothioate using either tetrabutylammonium (TBA) periodate or TBA oxone and has been deprotected under standard conditions to yield d(TspT). This dithymidine phosphate analogue is comparatively resistant to hydrolysis by nuclease P1, but the P-S bond is readily cleaved by aqueous solutions of either iodine or silver nitrate. Dithymidine-3'-S-phosphorodithioate (d[Tsp(s)T]) was prepared in an analogous fashion using sulphur to oxidise the intermediate dinucleoside phosphorothioite. Absolute stereochemistry has been assigned to the diastereoisomers of d[Tsp(s)T] by comparing their physical and chemical properties to those of the dinucleoside phosphorothioates.

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Year:  1990        PMID: 2315041      PMCID: PMC330334          DOI: 10.1093/nar/18.4.829

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  10 in total

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Journal:  Annu Rev Biochem       Date:  1985       Impact factor: 23.643

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Journal:  J Am Chem Soc       Date:  1972-03-22       Impact factor: 15.419

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Authors:  A F Cook; M J Holman; A L Nussbaum
Journal:  J Am Chem Soc       Date:  1969-03-12       Impact factor: 15.419

4.  Some substrate properties of analogues of oligothymidylates with p-s-C5' bonds.

Authors:  V N Rybakov; M I Rivkin; V P Kumarev
Journal:  Nucleic Acids Res       Date:  1981-01-10       Impact factor: 16.971

5.  [The inhibitory cholinergic innervation of the dilator on the movement of the pupil].

Authors:  R Suzuki; S Kobayashi; H Yoshino
Journal:  Nippon Ganka Gakkai Zasshi       Date:  1984-12

6.  The use of s-2-cyanoethyl phosphorothioate in the preparation of oligo 5'-deoxy-5'-thiothymidylates.

Authors:  J Kresse; K L Nagpal; J Nagyvary; J T Uchic
Journal:  Nucleic Acids Res       Date:  1975-01       Impact factor: 16.971

7.  Chemical synthesis of oligonucleotides containing a free sulphydryl group and subsequent attachment of thiol specific probes.

Authors:  B A Connolly; P Rider
Journal:  Nucleic Acids Res       Date:  1985-06-25       Impact factor: 16.971

8.  Polymer support oligonucleotide synthesis XVIII: use of beta-cyanoethyl-N,N-dialkylamino-/N-morpholino phosphoramidite of deoxynucleosides for the synthesis of DNA fragments simplifying deprotection and isolation of the final product.

Authors:  N D Sinha; J Biernat; J McManus; H Köster
Journal:  Nucleic Acids Res       Date:  1984-06-11       Impact factor: 16.971

9.  Phosphorothioate analogs of oligodeoxynucleotides: inhibitors of replication and cytopathic effects of human immunodeficiency virus.

Authors:  M Matsukura; K Shinozuka; G Zon; H Mitsuya; M Reitz; J S Cohen; S Broder
Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

Review 10.  Phosphorothioates in molecular biology.

Authors:  F Eckstein; G Gish
Journal:  Trends Biochem Sci       Date:  1989-03       Impact factor: 13.807

  10 in total
  10 in total

1.  Sin resolvase catalytic activity and oligomerization state are tightly coupled.

Authors:  Kent W Mouw; Andrew M Steiner; Rodolfo Ghirlando; Nan-Sheng Li; Sally-J Rowland; Martin R Boocock; W Marshall Stark; Joseph A Piccirilli; Phoebe A Rice
Journal:  J Mol Biol       Date:  2010-09-22       Impact factor: 5.469

2.  Active site constraints in the hydrolysis reaction catalyzed by bacterial RNase P: analysis of precursor tRNAs with a single 3'-S-phosphorothiolate internucleotide linkage.

Authors:  J M Warnecke; E J Sontheimer; J A Piccirilli; R K Hartmann
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

3.  Arginine as a general acid catalyst in serine recombinase-mediated DNA cleavage.

Authors:  Ross A Keenholtz; Kent W Mouw; Martin R Boocock; Nan-Sheng Li; Joseph A Piccirilli; Phoebe A Rice
Journal:  J Biol Chem       Date:  2013-08-22       Impact factor: 5.157

4.  Metal ion catalysis during group II intron self-splicing: parallels with the spliceosome.

Authors:  E J Sontheimer; P M Gordon; J A Piccirilli
Journal:  Genes Dev       Date:  1999-07-01       Impact factor: 11.361

5.  Synthesis and selective cleavage of an oligodeoxynucleotide containing a bridged internucleotide 5'-phosphorothioate linkage.

Authors:  M Mag; S Lüking; J W Engels
Journal:  Nucleic Acids Res       Date:  1991-04-11       Impact factor: 16.971

6.  Chemical and enzymatic properties of bridging 5'-S-phosphorothioester linkages in DNA.

Authors:  Y Xu; E T Kool
Journal:  Nucleic Acids Res       Date:  1998-07-01       Impact factor: 16.971

Review 7.  Identification of catalytic metal ion ligands in ribozymes.

Authors:  John K Frederiksen; Joseph A Piccirilli
Journal:  Methods       Date:  2009-08-03       Impact factor: 3.608

8.  Cleavage properties of an oligonucleotide containing a bridged internucleotide 5'-phosphorothioate RNA linkage.

Authors:  R G Kuimelis; L W McLaughlin
Journal:  Nucleic Acids Res       Date:  1995-12-11       Impact factor: 16.971

9.  Synthesis of phosphorothioamidites derived from 3'-thio-3'-deoxythymidine and 3'-thio-2',3'-dideoxycytidine and the automated synthesis of oligodeoxynucleotides containing a 3'-S-phosphorothiolate linkage.

Authors:  Ghalia Sabbagh; Kevin J Fettes; Rajendra Gosain; Ian A O'Neil; Richard Cosstick
Journal:  Nucleic Acids Res       Date:  2004-01-23       Impact factor: 16.971

10.  Solid-phase synthesis and structural characterisation of phosphoroselenolate-modified DNA: a backbone analogue which does not impose conformational bias and facilitates SAD X-ray crystallography.

Authors:  Patrick F Conlon; Olga Eguaogie; Jordan J Wilson; Jamie S T Sweet; Julian Steinhoegl; Klaudia Englert; Oliver G A Hancox; Christopher J Law; Sarah A Allman; James H R Tucker; James P Hall; Joseph S Vyle
Journal:  Chem Sci       Date:  2019-10-11       Impact factor: 9.825

  10 in total

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