Literature DB >> 23141535

Nuclear aggregation of olfactory receptor genes governs their monogenic expression.

E Josephine Clowney1, Mark A LeGros2, Colleen P Mosley3, Fiona G Clowney3, Eirene C Markenskoff-Papadimitriou4, Markko Myllys5, Gilad Barnea6, Carolyn A Larabell2, Stavros Lomvardas7.   

Abstract

Gene positioning and regulation of nuclear architecture are thought to influence gene expression. Here, we show that, in mouse olfactory neurons, silent olfactory receptor (OR) genes from different chromosomes converge in a small number of heterochromatic foci. These foci are OR exclusive and form in a cell-type-specific and differentiation-dependent manner. The aggregation of OR genes is developmentally synchronous with the downregulation of lamin b receptor (LBR) and can be reversed by ectopic expression of LBR in mature olfactory neurons. LBR-induced reorganization of nuclear architecture and disruption of OR aggregates perturbs the singularity of OR transcription and disrupts the targeting specificity of the olfactory neurons. Our observations propose spatial sequestering of heterochromatinized OR family members as a basis of monogenic and monoallelic gene expression.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23141535      PMCID: PMC3659163          DOI: 10.1016/j.cell.2012.09.043

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  35 in total

1.  Regulation of the probability of mouse odorant receptor gene choice.

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Journal:  Cell       Date:  2011-11-11       Impact factor: 41.582

2.  A regulatory archipelago controls Hox genes transcription in digits.

Authors:  Thomas Montavon; Natalia Soshnikova; Bénédicte Mascrez; Elisabeth Joye; Laurie Thevenet; Erik Splinter; Wouter de Laat; François Spitz; Denis Duboule
Journal:  Cell       Date:  2011-11-23       Impact factor: 41.582

Review 3.  Topographic mapping--the olfactory system.

Authors:  Takeshi Imai; Hitoshi Sakano; Leslie B Vosshall
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-16       Impact factor: 10.005

4.  Role of the nuclear lamina in genome organization and gene expression.

Authors:  D Peric-Hupkes; B van Steensel
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2011-01-05

5.  Transcription factories and nuclear organization of the genome.

Authors:  C H Eskiw; N F Cope; I Clay; S Schoenfelder; T Nagano; P Fraser
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2011-04-05

6.  Control of embryonic stem cell lineage commitment by core promoter factor, TAF3.

Authors:  Zhe Liu; Devin R Scannell; Michael B Eisen; Robert Tjian
Journal:  Cell       Date:  2011-09-02       Impact factor: 41.582

7.  High-throughput mapping of the promoters of the mouse olfactory receptor genes reveals a new type of mammalian promoter and provides insight into olfactory receptor gene regulation.

Authors:  E Josephine Clowney; Angeliki Magklara; Bradley M Colquitt; Nidhi Pathak; Robert P Lane; Stavros Lomvardas
Journal:  Genome Res       Date:  2011-06-24       Impact factor: 9.043

8.  An epigenetic signature for monoallelic olfactory receptor expression.

Authors:  Angeliki Magklara; Angela Yen; Bradley M Colquitt; E Josephine Clowney; William Allen; Eirene Markenscoff-Papadimitriou; Zoe A Evans; Pouya Kheradpour; George Mountoufaris; Catriona Carey; Gilad Barnea; Manolis Kellis; Stavros Lomvardas
Journal:  Cell       Date:  2011-04-28       Impact factor: 41.582

9.  Soft X-ray tomography of phenotypic switching and the cellular response to antifungal peptoids in Candida albicans.

Authors:  Maho Uchida; Gerry McDermott; Modi Wetzler; Mark A Le Gros; Markko Myllys; Christian Knoechel; Annelise E Barron; Carolyn A Larabell
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-30       Impact factor: 11.205

Review 10.  Soft X-ray tomography and cryogenic light microscopy: the cool combination in cellular imaging.

Authors:  Gerry McDermott; Mark A Le Gros; Christian G Knoechel; Maho Uchida; Carolyn A Larabell
Journal:  Trends Cell Biol       Date:  2009-10-07       Impact factor: 20.808

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  157 in total

Review 1.  Random monoallelic expression of autosomal genes: stochastic transcription and allele-level regulation.

Authors:  Björn Reinius; Rickard Sandberg
Journal:  Nat Rev Genet       Date:  2015-10-07       Impact factor: 53.242

2.  Neuroepigenomics: Resources, Obstacles, and Opportunities.

Authors:  John S Satterlee; Andrea Beckel-Mitchener; Roger Little; Dena Procaccini; Joni L Rutter; Amy C Lossie
Journal:  Neuroepigenetics       Date:  2015-01-01

Review 3.  Chromatin regulation at the frontier of synthetic biology.

Authors:  Albert J Keung; J Keith Joung; Ahmad S Khalil; James J Collins
Journal:  Nat Rev Genet       Date:  2015-02-10       Impact factor: 53.242

Review 4.  Something silent this way forms: the functional organization of the repressive nuclear compartment.

Authors:  Joan C Ritland Politz; David Scalzo; Mark Groudine
Journal:  Annu Rev Cell Dev Biol       Date:  2013-07-05       Impact factor: 13.827

5.  CruzDB: software for annotation of genomic intervals with UCSC genome-browser database.

Authors:  Brent S Pedersen; Ivana V Yang; Subhajyoti De
Journal:  Bioinformatics       Date:  2013-09-12       Impact factor: 6.937

Review 6.  Large-scale chromatin organization: the good, the surprising, and the still perplexing.

Authors:  Andrew S Belmont
Journal:  Curr Opin Cell Biol       Date:  2013-11-13       Impact factor: 8.382

7.  Transcriptional regulation of enhancers active in protodomains of the developing cerebral cortex.

Authors:  Kartik Pattabiraman; Olga Golonzhka; Susan Lindtner; Alex S Nord; Leila Taher; Renee Hoch; Shanni N Silberberg; Dongji Zhang; Bin Chen; HongKui Zeng; Len A Pennacchio; Luis Puelles; Axel Visel; John L R Rubenstein
Journal:  Neuron       Date:  2014-05-08       Impact factor: 17.173

8.  Silencing of odorant receptor genes by G protein βγ signaling ensures the expression of one odorant receptor per olfactory sensory neuron.

Authors:  Todd Ferreira; Sarah R Wilson; Yoon Gi Choi; Davide Risso; Sandrine Dudoit; Terence P Speed; John Ngai
Journal:  Neuron       Date:  2014-02-19       Impact factor: 17.173

Review 9.  Spinning the web of cell fate.

Authors:  Kevin Van Bortle; Victor G Corces
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

10.  Odorant Receptor Gene Choice.

Authors:  Timothy S McClintock
Journal:  ChemoSense       Date:  2015-03
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