Literature DB >> 21529909

An epigenetic signature for monoallelic olfactory receptor expression.

Angeliki Magklara1, Angela Yen, Bradley M Colquitt, E Josephine Clowney, William Allen, Eirene Markenscoff-Papadimitriou, Zoe A Evans, Pouya Kheradpour, George Mountoufaris, Catriona Carey, Gilad Barnea, Manolis Kellis, Stavros Lomvardas.   

Abstract

Constitutive heterochromatin is traditionally viewed as the static form of heterochromatin that silences pericentromeric and telomeric repeats in a cell cycle- and differentiation-independent manner. Here, we show that, in the mouse olfactory epithelium, olfactory receptor (OR) genes are marked in a highly dynamic fashion with the molecular hallmarks of constitutive heterochromatin, H3K9me3 and H4K20me3. The cell type and developmentally dependent deposition of these marks along the OR clusters are, most likely, reversed during the process of OR choice to allow for monogenic and monoallelic OR expression. In contrast to the current view of OR choice, our data suggest that OR silencing takes place before OR expression, indicating that it is not the product of an OR-elicited feedback signal. Our findings suggest that chromatin-mediated silencing lays a molecular foundation upon which singular and stochastic selection for gene expression can be applied.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21529909      PMCID: PMC3094500          DOI: 10.1016/j.cell.2011.03.040

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  48 in total

1.  Multipotency of purified, transplanted globose basal cells in olfactory epithelium.

Authors:  Xueyan Chen; Hengsheng Fang; James E Schwob
Journal:  J Comp Neurol       Date:  2004-02-16       Impact factor: 3.215

2.  A feedback mechanism regulates monoallelic odorant receptor expression.

Authors:  Joseph W Lewcock; Randall R Reed
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-19       Impact factor: 11.205

3.  Gene switching and the stability of odorant receptor gene choice.

Authors:  Benjamin M Shykind; S Christy Rohani; Sean O'Donnell; Adriana Nemes; Monica Mendelsohn; Yonghua Sun; Richard Axel; Gilad Barnea
Journal:  Cell       Date:  2004-06-11       Impact factor: 41.582

4.  Gene expression nervous system atlas (GENSAT).

Authors:  Nathaniel Heintz
Journal:  Nat Neurosci       Date:  2004-05       Impact factor: 24.884

5.  Odorant receptors on axon termini in the brain.

Authors:  G Barnea; S O'Donnell; F Mancia; X Sun; A Nemes; M Mendelsohn; R Axel
Journal:  Science       Date:  2004-06-04       Impact factor: 47.728

6.  Physical properties of a genomic condensed chromatin fragment.

Authors:  Rodolfo Ghirlando; Michael D Litt; Marie-Noëlle Prioleau; Félix Recillas-Targa; Gary Felsenfeld
Journal:  J Mol Biol       Date:  2004-02-20       Impact factor: 5.469

7.  The OMP-lacZ transgene mimics the unusual expression pattern of OR-Z6, a new odorant receptor gene on mouse chromosome 6: implication for locus-dependent gene expression.

Authors:  M Pyrski; Z Xu; E Walters; D J Gilbert; N A Jenkins; N G Copeland; F L Margolis
Journal:  J Neurosci       Date:  2001-07-01       Impact factor: 6.167

8.  Negative feedback regulation ensures the one receptor-one olfactory neuron rule in mouse.

Authors:  Shou Serizawa; Kazunari Miyamichi; Hiroko Nakatani; Misao Suzuki; Michiko Saito; Yoshihiro Yoshihara; Hitoshi Sakano
Journal:  Science       Date:  2003-10-30       Impact factor: 47.728

9.  Olfactory horizontal basal cells demonstrate a conserved multipotent progenitor phenotype.

Authors:  Lindsay A Carter; Jessica L MacDonald; A Jane Roskams
Journal:  J Neurosci       Date:  2004-06-23       Impact factor: 6.167

10.  Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model.

Authors:  Jessica L Larson; Guo-Cheng Yuan
Journal:  BMC Bioinformatics       Date:  2010-11-12       Impact factor: 3.169

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  153 in total

1.  Chromatin modification of Notch targets in olfactory receptor neuron diversification.

Authors:  Keita Endo; M Rezaul Karim; Hiroaki Taniguchi; Alena Krejci; Emi Kinameri; Matthias Siebert; Kei Ito; Sarah J Bray; Adrian W Moore
Journal:  Nat Neurosci       Date:  2011-12-25       Impact factor: 24.884

2.  Extinction reverses olfactory fear-conditioned increases in neuron number and glomerular size.

Authors:  Filomene G Morrison; Brian G Dias; Kerry J Ressler
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-29       Impact factor: 11.205

3.  Endogenous nuclear RNAi mediates behavioral adaptation to odor.

Authors:  Bi-Tzen Juang; Chen Gu; Linda Starnes; Francesca Palladino; Andrei Goga; Scott Kennedy; Noelle D L'Etoile
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

4.  Chromatin immunoprecipitation and gene expression analysis of neuronal subtypes after fluorescence activated cell sorting.

Authors:  Andrey Finegersh; Gregg E Homanics
Journal:  J Neurosci Methods       Date:  2016-02-08       Impact factor: 2.390

Review 5.  The role of epigenetics and chromatin structure in transcriptional regulation in malaria parasites.

Authors:  Steven Abel; Karine G Le Roch
Journal:  Brief Funct Genomics       Date:  2019-09-24       Impact factor: 4.241

6.  Cell type-dependent axonal localization of translational regulators and mRNA in mouse peripheral olfactory neurons.

Authors:  Lulu I T Korsak; Katherine A Shepard; Michael R Akins
Journal:  J Comp Neurol       Date:  2017-03-26       Impact factor: 3.215

7.  Zfp423/OAZ mutation reveals the importance of Olf/EBF transcription activity in olfactory neuronal maturation.

Authors:  Yang A Roby; Michael A Bushey; Li E Cheng; Heather M Kulaga; Se-Jin Lee; Randall R Reed
Journal:  J Neurosci       Date:  2012-10-03       Impact factor: 6.167

8.  Increased H3K9 methylation and impaired expression of Protocadherins are associated with the cognitive dysfunctions of the Kleefstra syndrome.

Authors:  Giovanni Iacono; Aline Dubos; Hamid Méziane; Marco Benevento; Ehsan Habibi; Amit Mandoli; Fabrice Riet; Mohammed Selloum; Robert Feil; Huiqing Zhou; Tjitske Kleefstra; Nael Nadif Kasri; Hans van Bokhoven; Yann Herault; Hendrik G Stunnenberg
Journal:  Nucleic Acids Res       Date:  2018-06-01       Impact factor: 16.971

9.  Silencing of odorant receptor genes by G protein βγ signaling ensures the expression of one odorant receptor per olfactory sensory neuron.

Authors:  Todd Ferreira; Sarah R Wilson; Yoon Gi Choi; Davide Risso; Sandrine Dudoit; Terence P Speed; John Ngai
Journal:  Neuron       Date:  2014-02-19       Impact factor: 17.173

Review 10.  Spinning the web of cell fate.

Authors:  Kevin Van Bortle; Victor G Corces
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

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