Literature DB >> 2313684

Ultrastructural preservation of nuclei and chromatin: improvement with low-temperature methods.

R A Horowitz1, P J Giannasca, C L Woodcock.   

Abstract

The ultrastructure of chromatin has been examined in nuclei prepared by a variety of low-temperature methods. Embedding glutaraldehyde (GA)-fixed nuclei in Lowicryl K4M or K11M following dehydration by the progressive lowering of temperature (PLT) method, or in K11M following spray freezing and freeze substitution (FS), produces chromatin fibres that have, in situ, a diameter close to the in vivo state, and show internal structural details consistent with patterns of nucleosome packing previously observed only in preparations of isolated fibres. This is a temperature-dependent effect; fibres conventionally dehydrated and embedded in Lowicryl at 0 degrees C or in conventional epoxy resin at 60 degrees C have lower and less uniform diameters, and lack internal structural details. Of the techniques used, spray freezing followed by FS resulted in the most notable improvement over conventional methods. Inclusion of GA during FS of rapidly frozen, unfixed nuclei in methanol does not result in cross-linking of nuclear proteins. In acetone, however, cross-linking by GA occurs at -45 degrees C, or at lower temperatures if the water content of the acetone-based FS media is kept deliberately high. Substitution regimes employing GA alone or in combination with uranyl acetate and/or osmium tetroxide do not result in fibre morphologies comparable to either prefixed or unfixed nuclei substituted in additive-free substitution media. Whole fibroblasts show excellent preservation of nuclei and the nuclear/cytoplasmic interface after spray freezing followed by FS and low-temperature embedding.

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Year:  1990        PMID: 2313684     DOI: 10.1111/j.1365-2818.1990.tb02959.x

Source DB:  PubMed          Journal:  J Microsc        ISSN: 0022-2720            Impact factor:   1.758


  9 in total

1.  Using rapid freeze and freeze-substitution for the preparation of yeast cells for electron microscopy and three-dimensional analysis.

Authors:  T H Giddings; E T O'Toole; M Morphew; D N Mastronarde; J R McIntosh; M Winey
Journal:  Methods Cell Biol       Date:  2001       Impact factor: 1.441

2.  Quantitative evaluation of freeze-substitution effects on preservation of nuclear antigens during preparation of biological samples for immunoelectron microscopy.

Authors:  Margarita A Sobol; Vlada V Philimonenko; Anatoly A Philimonenko; Pavel Hozák
Journal:  Histochem Cell Biol       Date:  2012-03-01       Impact factor: 4.304

Review 3.  Organization of interphase chromatin.

Authors:  Rachel A Horowitz-Scherer; Christopher L Woodcock
Journal:  Chromosoma       Date:  2005-12-17       Impact factor: 4.316

Review 4.  Dimensional changes in cells and tissues during specimen preparation for the electron microscope.

Authors:  M V King
Journal:  Cell Biophys       Date:  1991-02

5.  A chromatin folding model that incorporates linker variability generates fibers resembling the native structures.

Authors:  C L Woodcock; S A Grigoryev; R A Horowitz; N Whitaker
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-01       Impact factor: 11.205

6.  Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopy.

Authors:  J Bednar; R A Horowitz; J Dubochet; C L Woodcock
Journal:  J Cell Biol       Date:  1995-12       Impact factor: 10.539

7.  The three-dimensional architecture of chromatin in situ: electron tomography reveals fibers composed of a continuously variable zig-zag nucleosomal ribbon.

Authors:  R A Horowitz; D A Agard; J W Sedat; C L Woodcock
Journal:  J Cell Biol       Date:  1994-04       Impact factor: 10.539

8.  Chromatin fibers observed in situ in frozen hydrated sections. Native fiber diameter is not correlated with nucleosome repeat length.

Authors:  C L Woodcock
Journal:  J Cell Biol       Date:  1994-04       Impact factor: 10.539

9.  Visualization of G1 chromosomes: a folded, twisted, supercoiled chromonema model of interphase chromatid structure.

Authors:  A S Belmont; K Bruce
Journal:  J Cell Biol       Date:  1994-10       Impact factor: 10.539

  9 in total

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