Literature DB >> 23135480

Critical roles of RNA-binding proteins in miRNA biogenesis in Arabidopsis.

Guodong Ren1, Bin Yu.   

Abstract

MicroRNAs (miRNAs) are key regulators of gene expression and play critical roles in modulating metabolism, development and physiology in animals and plants. miRNA levels are transcriptionally and post-transcriptionally controlled for their proper function. Recent studies have shown that RNA-binding proteins play important roles in producing miRNAs by affecting the accurate and/or efficient processing of precursors of miRNAs. Many of these RNA-binding proteins also have roles in general RNA metabolism, indicating potential connections between miRNA biogenesis and other RNA metabolism. Here, we focus on the function of several RNA-binding proteins in miRNA biogenesis in Arabidopsis.

Entities:  

Keywords:  Arabidopsis; CBP80/CBP20; DCL1; DDL; HYL1; RNA-binding protein; SE; TOUGH; miRNA biogenesis

Mesh:

Substances:

Year:  2012        PMID: 23135480     DOI: 10.4161/rna.22740

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  10 in total

1.  Hyponastic Leaves 1 protects pri-miRNAs from nuclear exosome attack.

Authors:  Shuai Gao; Jingyu Wang; Ning Jiang; Shiting Zhang; Yuan Wang; Jun Zhang; Ning Li; Yixiao Fang; Lin Yang; Susu Chen; Bingbing Yan; Tian Huang; Benke Kuai; Yingxiang Wang; Fang Chang; Guodong Ren
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-07       Impact factor: 11.205

2.  KETCH1 imports HYL1 to nucleus for miRNA biogenesis in Arabidopsis.

Authors:  Zhonghui Zhang; Xinwei Guo; Chunxiao Ge; Zeyang Ma; Mengqiu Jiang; Tianhong Li; Hisashi Koiwa; Seong Wook Yang; Xiuren Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-27       Impact factor: 11.205

3.  RNA-binding protein DUS16 plays an essential role in primary miRNA processing in the unicellular alga Chlamydomonas reinhardtii.

Authors:  Tomohito Yamasaki; Masayuki Onishi; Eun-Jeong Kim; Heriberto Cerutti; Takeshi Ohama
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-31       Impact factor: 11.205

4.  Arabidopsis AAR2, a conserved splicing factor in eukaryotes, acts in microRNA biogenesis.

Authors:  Lusheng Fan; Bin Gao; Ye Xu; Nora Flynn; Brandon Le; Chenjiang You; Shaofang Li; Natalia Achkar; Pablo A Manavella; Zhenbiao Yang; Xuemei Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-03       Impact factor: 12.779

Review 5.  microRNA biogenesis, degradation and activity in plants.

Authors:  Meng Xie; Shuxin Zhang; Bin Yu
Journal:  Cell Mol Life Sci       Date:  2014-09-11       Impact factor: 9.261

6.  Synergistic and independent actions of multiple terminal nucleotidyl transferases in the 3' tailing of small RNAs in Arabidopsis.

Authors:  Xiaoyan Wang; Shuxin Zhang; Yongchao Dou; Chi Zhang; Xuemei Chen; Bin Yu; Guodong Ren
Journal:  PLoS Genet       Date:  2015-04-30       Impact factor: 5.917

7.  PRL1, an RNA-binding protein, positively regulates the accumulation of miRNAs and siRNAs in Arabidopsis.

Authors:  Shuxin Zhang; Yuhui Liu; Bin Yu
Journal:  PLoS Genet       Date:  2014-12-04       Impact factor: 5.917

8.  Integrated Analysis of mRNA and microRNA Elucidates the Regulation of Glycyrrhizic Acid Biosynthesis in Glycyrrhiza uralensis Fisch.

Authors:  Yanni Li; Caixia Chen; Zhenzhen Xie; Jing Xu; Bin Wu; Wenquan Wang
Journal:  Int J Mol Sci       Date:  2020-04-28       Impact factor: 5.923

Review 9.  Post-Translational Regulation of miRNA Pathway Components, AGO1 and HYL1, in Plants.

Authors:  Seok Keun Cho; Moon Young Ryu; Pratik Shah; Christian Peter Poulsen; Seong Wook Yang
Journal:  Mol Cells       Date:  2016-07-20       Impact factor: 5.034

10.  A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes.

Authors:  Marcin Pieczynski; Katarzyna Kruszka; Dawid Bielewicz; Jakub Dolata; Michal Szczesniak; Wojciech Karlowski; Artur Jarmolowski; Zofia Szweykowska-Kulinska
Journal:  Front Plant Sci       Date:  2018-04-16       Impact factor: 5.753

  10 in total

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