Literature DB >> 23131117

Going back to the future with Guthrie-powered epigenome-wide association studies.

Mark N Cruickshank1, James Pitt2, Jeffrey M Craig3.   

Abstract

Epigenome-wide association studies (EWAS) can be used to investigate links between early life environment, epigenetics and disease. However, such studies raise the question of which came first: the mark or the malady? A recent study has demonstrated that EWAS can be performed on neonatal 'Guthrie' heel-prick blood spots. As Guthrie cards are collected from all newborn infants and stored indefinitely in many countries, they represent an important timepoint to compare with later disease-associated epigenetic marks.

Entities:  

Keywords:  DNA; Guthrie cards; biomarkers; epigenetics; newborn screening

Year:  2012        PMID： 23131117      PMCID： PMC3580452          DOI： 10.1186/gm384

Source DB:  PubMed          Journal:  Genome Med        ISSN： 1756-994X            Impact factor:   11.117


  10 in total

1.  Archived Guthrie blood spots as a novel source for quantitative DNA methylation analysis.

Authors:  Nicholas Wong; Ruth Morley; Richard Saffery; Jeffrey Craig
Journal:  Biotechniques       Date:  2008-10       Impact factor: 1.993

2.  Quantitation of RNA decay in dried blood spots during 20 years of storage.

Authors:  Fredrika Gauffin; Ann Nordgren; Gisela Barbany; Britt Gustafsson; Håkan Karlsson
Journal:  Clin Chem Lab Med       Date:  2009       Impact factor: 3.694

3.  A conceptual framework for the developmental origins of health and disease.

Authors:  P D Gluckman; M A Hanson; T Buklijas
Journal:  J Dev Orig Health Dis       Date:  2010-02       Impact factor: 2.401

4.  Personalized epigenomic signatures that are stable over time and covary with body mass index.

Authors:  Andrew P Feinberg; Rafael A Irizarry; Delphine Fradin; Martin J Aryee; Peter Murakami; Thor Aspelund; Gudny Eiriksdottir; Tamara B Harris; Lenore Launer; Vilmundur Gudnason; M Daniele Fallin
Journal:  Sci Transl Med       Date:  2010-09-15       Impact factor: 17.956

5.  Optimizing Bob Guthrie's legacy--storage and use of residual newborn screening specimens.

Authors:  Dianne Webster
Journal:  Genet Med       Date:  2011-07       Impact factor: 8.822

6.  DNA methylation differences after exposure to prenatal famine are common and timing- and sex-specific.

Authors:  Elmar W Tobi; L H Lumey; Rudolf P Talens; Dennis Kremer; Hein Putter; Aryeh D Stein; P Eline Slagboom; Bastiaan T Heijmans
Journal:  Hum Mol Genet       Date:  2009-08-04       Impact factor: 6.150

7.  DNA methylation patterns in cord blood DNA and body size in childhood.

Authors:  Caroline L Relton; Alexandra Groom; Beate St Pourcain; Adrian E Sayers; Daniel C Swan; Nicholas D Embleton; Mark S Pearce; Susan M Ring; Kate Northstone; Jon H Tobias; Joseph Trakalo; Andy R Ness; Seif O Shaheen; George Davey Smith
Journal:  PLoS One       Date:  2012-03-14       Impact factor: 3.240

8.  Identification of type 1 diabetes-associated DNA methylation variable positions that precede disease diagnosis.

Authors:  Vardhman K Rakyan; Huriya Beyan; Thomas A Down; Mohammed I Hawa; Siarhei Maslau; Deeqo Aden; Antoine Daunay; Florence Busato; Charles A Mein; Burkhard Manfras; Kerith-Rae M Dias; Christopher G Bell; Jörg Tost; Bernhard O Boehm; Stephan Beck; R David Leslie
Journal:  PLoS Genet       Date:  2011-09-29       Impact factor: 5.917

9.  Fragile X-related element 2 methylation analysis may provide a suitable option for inclusion of fragile X syndrome and/or sex chromosome aneuploidy into newborn screening: a technical validation study.

Authors:  Yoshimi Inaba; Amy S Herlihy; Charles E Schwartz; Cindy Skinner; Quang M Bui; Joanna Cobb; Elva Z Shi; David Francis; Alison Arvaj; David J Amor; Kate Pope; Tiffany Wotton; Jonathan Cohen; Jacqueline K Hewitt; Randi J Hagerman; Sylvia A Metcalfe; John L Hopper; Danuta Z Loesch; Howard R Slater; David E Godler
Journal:  Genet Med       Date:  2012-10-11       Impact factor: 8.822

10.  Guthrie card methylomics identifies temporally stable epialleles that are present at birth in humans.

Authors:  Huriya Beyan; Thomas A Down; Sreeram V Ramagopalan; Kristina Uvebrant; Anita Nilsson; Michelle L Holland; Carolina Gemma; Gavin Giovannoni; Bernhard O Boehm; George C Ebers; Åke Lernmark; Corrado M Cilio; R David Leslie; Vardhman K Rakyan
Journal:  Genome Res       Date:  2012-08-23       Impact factor: 9.043
  10 in total
  10 in total

1.  Neonatal Levels of T-cell Receptor Excision Circles (TREC) in Patients with 22q11.2 Deletion Syndrome and Later Disease Features.

Authors:  Kiran A Gul; Torstein Øverland; Liv Osnes; Lars O Baumbusch; Rolf D Pettersen; Kari Lima; Tore G Abrahamsen
Journal:  J Clin Immunol       Date:  2015-03-27       Impact factor: 8.317

Review 2.  The Role of Epigenetic Change in Autism Spectrum Disorders.

Authors:  Yuk Jing Loke; Anthony John Hannan; Jeffrey Mark Craig
Journal:  Front Neurol       Date:  2015-05-26       Impact factor: 4.003

3.  Optimized DNA extraction from neonatal dried blood spots: application in methylome profiling.

Authors:  Akram Ghantous; Richard Saffery; Marie-Pierre Cros; Anne-Louise Ponsonby; Steven Hirschfeld; Carol Kasten; Terence Dwyer; Zdenko Herceg; Hector Hernandez-Vargas
Journal:  BMC Biotechnol       Date:  2014-07-01       Impact factor: 2.563

4.  Thymus activity measured by T-cell receptor excision circles in patients with different severities of respiratory syncytial virus infection.

Authors:  Kiran Aftab Gul; Tonje Sonerud; Hans O Fjærli; Britt Nakstad; Tore Gunnar Abrahamsen; Christopher S Inchley
Journal:  BMC Infect Dis       Date:  2017-01-05       Impact factor: 3.090

5.  Assessment of dried blood spots for DNA methylation profiling.

Authors:  David J Porteous; Kathryn L Evans; Rosie M Walker; Louise MacGillivray; Sarah McCafferty; Nicola Wrobel; Lee Murphy; Shona M Kerr; Stewart W Morris; Archie Campbell; Andrew M McIntosh
Journal:  Wellcome Open Res       Date:  2019-03-06

6.  The utility of post-test newborn blood spot screening cards for epigenetic association analyses: association between HIF3A methylation and birth weight-for-gestational age.

Authors:  Tay Zar Kyaw; Seiji Yamaguchi; Chihiro Imai; Marina Uematsu; Noriko Sato
Journal:  J Hum Genet       Date:  2019-05-29       Impact factor: 3.172

7.  The use of DNA from archival dried blood spots with the Infinium HumanMethylation450 array.

Authors:  JiHoon E Joo; Ee Ming Wong; Laura Baglietto; Chol-Hee Jung; Helen Tsimiklis; Daniel J Park; Nicholas C Wong; Dallas R English; John L Hopper; Gianluca Severi; Graham G Giles; Melissa C Southey
Journal:  BMC Biotechnol       Date:  2013-03-15       Impact factor: 2.563

8.  Study protocol: the Childhood to Adolescence Transition Study (CATS).

Authors:  Lisa K Mundy; Julian G Simmons; Nicholas B Allen; Russell M Viner; Jordana K Bayer; Timothy Olds; Jo Williams; Craig Olsson; Helena Romaniuk; Fiona Mensah; Susan M Sawyer; Louisa Degenhardt; Rosa Alati; Melissa Wake; Felice Jacka; George C Patton
Journal:  BMC Pediatr       Date:  2013-10-08       Impact factor: 2.125

Review 9.  DNA methylation biomarkers: cancer and beyond.

Authors:  Thomas Mikeska; Jeffrey M Craig
Journal:  Genes (Basel)       Date:  2014-09-16       Impact factor: 4.096

10.  Epigenome-wide analysis in newborn blood spots from monozygotic twins discordant for cerebral palsy reveals consistent regional differences in DNA methylation.

Authors:  Namitha Mohandas; Sebastian Bass-Stringer; Jovana Maksimovic; Kylie Crompton; Yuk J Loke; Janet Walstab; Susan M Reid; David J Amor; Dinah Reddihough; Jeffrey M Craig
Journal:  Clin Epigenetics       Date:  2018-02-23       Impact factor: 6.551
  10 in total

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