Literature DB >> 23128009

Epigenetics and crop improvement.

Nathan M Springer1.   

Abstract

There is considerable excitement about the potential for epigenetic information to contribute to heritable variation in many species. Our understanding of the molecular mechanisms of epigenetic inheritance is rapidly growing, and it is now possible to profile the epigenome at high resolution. Epigenetic information plays a role in developmental gene regulation, response to the environment, and in natural variation of gene expression levels. Because of these central roles, there is the potential for epigenetics to play a role in crop improvement strategies including the selection for favorable epigenetic states, creation of novel epialleles, and regulation of transgene expression. In this review we consider the potential, and the limitations, of epigenetic variation in crop improvement.
Copyright © 2012 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2012        PMID: 23128009     DOI: 10.1016/j.tig.2012.10.009

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  38 in total

1.  Building coral reef resilience through assisted evolution.

Authors:  Madeleine J H van Oppen; James K Oliver; Hollie M Putnam; Ruth D Gates
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

2.  Selection for Improved Energy Use Efficiency and Drought Tolerance in Canola Results in Distinct Transcriptome and Epigenome Changes.

Authors:  Aurine Verkest; Marina Byzova; Cindy Martens; Patrick Willems; Tom Verwulgen; Bram Slabbinck; Debbie Rombaut; Jan Van de Velde; Klaas Vandepoele; Evi Standaert; Marrit Peeters; Mieke Van Lijsebettens; Frank Van Breusegem; Marc De Block
Journal:  Plant Physiol       Date:  2015-06-16       Impact factor: 8.340

3.  Epigenetic basis of morphological variation and phenotypic plasticity in Arabidopsis thaliana.

Authors:  Rik Kooke; Frank Johannes; René Wardenaar; Frank Becker; Mathilde Etcheverry; Vincent Colot; Dick Vreugdenhil; Joost J B Keurentjes
Journal:  Plant Cell       Date:  2015-02-10       Impact factor: 11.277

Review 4.  Tissue culture-induced DNA methylation in crop plants: a review.

Authors:  Amrita Ghosh; Abir U Igamberdiev; Samir C Debnath
Journal:  Mol Biol Rep       Date:  2021-01-04       Impact factor: 2.316

Review 5.  Epigenetics and epigenomics: underlying mechanisms, relevance, and implications in crop improvement.

Authors:  Gaurav Agarwal; Himabindu Kudapa; Abirami Ramalingam; Divya Choudhary; Pallavi Sinha; Vanika Garg; Vikas K Singh; Gunvant B Patil; Manish K Pandey; Henry T Nguyen; Baozhu Guo; Ramanjulu Sunkar; Chad E Niederhuth; Rajeev K Varshney
Journal:  Funct Integr Genomics       Date:  2020-10-21       Impact factor: 3.410

6.  Rate, spectrum, and evolutionary dynamics of spontaneous epimutations.

Authors:  Adriaan van der Graaf; René Wardenaar; Drexel A Neumann; Aaron Taudt; Ruth G Shaw; Ritsert C Jansen; Robert J Schmitz; Maria Colomé-Tatché; Frank Johannes
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

7.  Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapa.

Authors:  Miriam Payá-Milans; Laura Poza-Viejo; Patxi San Martín-Uriz; David Lara-Astiaso; Mark D Wilkinson; Pedro Crevillén
Journal:  Gigascience       Date:  2019-12-01       Impact factor: 6.524

Review 8.  New breeding technique "genome editing" for crop improvement: applications, potentials and challenges.

Authors:  Supriya B Aglawe; Kalyani M Barbadikar; Satendra K Mangrauthia; M Sheshu Madhav
Journal:  3 Biotech       Date:  2018-07-23       Impact factor: 2.406

9.  Mutation of a major CG methylase in rice causes genome-wide hypomethylation, dysregulated genome expression, and seedling lethality.

Authors:  Lanjuan Hu; Ning Li; Chunming Xu; Silin Zhong; Xiuyun Lin; Jingjing Yang; Tianqi Zhou; Anzhi Yuliang; Ying Wu; Yun-Ru Chen; Xiaofeng Cao; Assaf Zemach; Sachin Rustgi; Diter von Wettstein; Bao Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-07       Impact factor: 11.205

10.  Analysis of DNA methylation of perennial ryegrass under drought using the methylation-sensitive amplification polymorphism (MSAP) technique.

Authors:  Xiao-Mei Tang; Xiang Tao; Yan Wang; Dong-Wei Ma; Dan Li; Hong Yang; Xin-Rong Ma
Journal:  Mol Genet Genomics       Date:  2014-06-12       Impact factor: 3.291

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