Literature DB >> 23125755

N-[2,6-Bis(1-methyl-eth-yl)phen-yl]pyridine-4-carboxamide.

Baptiste Laramée1, Mihaela Cibian, Garry S Hanan.   

Abstract

In the title compound, C(18)H(22)N(2)O, the dihedral angle between the benzene ring and the pyridine ring is 80.0 (1)°. In the crystal, N-H⋯O hydrogen bonds connect the mol-ecules into chains along the b axis. The packing also features C-H⋯O and C-H⋯N hydrogen bonds and C-H⋯π interactions, one directed to the benzene ring and the other to the center of the pyridine ring.

Entities:  

Year:  2012        PMID: 23125755      PMCID: PMC3470342          DOI: 10.1107/S1600536812038846

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general review and synthetic details about amide bond generation and application, see: Pattabiraman & Bode (2011 ▶). The title compound has not been reported in coordination chemistry, but complexes of similar ligands are known. For the use of such ligands in coordination chemistry, see: Baytekin et al. (2009 ▶); Hasegawa et al. (2007 ▶); Kumar et al. (2004 ▶). For related benzamide crystal structures, see: Saeed et al. (2010 ▶); Zhang & Zhao (2010 ▶); Roopan et al. (2009 ▶); Gowda et al. (2008 ▶). For background to the synthetic route, see: Boeré et al. (1998 ▶); Krajete et al. (2004 ▶); Schafer et al. (2011 ▶); Wallace et al. (1990 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

n class="Chemical">C18H22N2O M = 282.38 Monoclinic, a = 9.0994 (1) Å b = 9.8039 (1) Å c = 18.1882 (2) Å β = 96.8650 (4)° V = 1610.93 (3) Å3 Z = 4 Cu Kα radiation μ = 0.57 mm−1 T = 150 K 0.20 × 0.12 × 0.12 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.895, T max = 0.935 81057 measured reflections 3126 independent reflections 3000 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.097 S = 1.04 3126 reflections 198 parameters n class="Disease">H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.23 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: UdMX (Maris, 2004 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812038846/nk2182sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812038846/nk2182Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812038846/nk2182Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H22N2OF(000) = 608
Mr = 282.38Dx = 1.164 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 9664 reflections
a = 9.0994 (1) Åθ = 4.9–70.9°
b = 9.8039 (1) ŵ = 0.57 mm1
c = 18.1882 (2) ÅT = 150 K
β = 96.8650 (4)°Block, colourless
V = 1610.93 (3) Å30.20 × 0.12 × 0.12 mm
Z = 4
Bruker APEXII CCD diffractometer3126 independent reflections
Radiation source: fine-focus sealed tube3000 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.025
φ and ω scansθmax = 71.3°, θmin = 4.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.895, Tmax = 0.935k = −11→12
81057 measured reflectionsl = −22→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.097H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0527P)2 + 0.483P] where P = (Fo2 + 2Fc2)/3
3126 reflections(Δ/σ)max < 0.001
198 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.17 e Å3
Experimental. X-ray crystallographic data for I were collected from a single-crystal sample, which was mounted on a loop fiber. Data were collected using a Bruker Platform diffractometer, equipped with a Bruker SMART 4 K Charged-Coupled Device (CCD) Area Detector using the program APEX2 and a Nonius FR591 rotating anode equiped with a Montel 200 optics The crystal-to-detector distance was 5.0 cm, and the data collection was carried out in 512 x 512 pixel mode. The initial unit-cell parameters were determined by a least-squares fit of the angular setting of strong reflections, collected by a 10.0 degree scan in 33 frames over four different parts of the reciprocal space (132 frames total). One complete sphere of data was collected, to better than 0.80 Å resolution.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.56648 (10)0.43259 (10)0.26398 (5)0.0201 (2)
C20.68103 (10)0.39496 (10)0.32743 (5)0.0195 (2)
C30.70323 (11)0.26362 (10)0.35548 (5)0.0225 (2)
H30.64950.18860.33280.027*
C40.80589 (11)0.24503 (11)0.41754 (6)0.0256 (2)
H40.82120.15490.43610.031*
C50.86349 (11)0.47088 (11)0.42454 (6)0.0258 (2)
H50.91880.54400.44830.031*
C60.76529 (11)0.49972 (10)0.36234 (6)0.0236 (2)
H60.75560.59020.34370.028*
C70.35237 (11)0.35774 (10)0.18088 (5)0.0215 (2)
C80.22392 (11)0.40448 (11)0.20807 (6)0.0253 (2)
C90.09606 (12)0.41663 (12)0.15761 (6)0.0308 (3)
H90.00670.44740.17430.037*
C100.09807 (12)0.38435 (12)0.08382 (6)0.0322 (3)
H100.00990.39230.05040.039*
C110.22720 (13)0.34047 (11)0.05807 (6)0.0295 (2)
H110.22700.32050.00690.035*
C120.35778 (12)0.32520 (10)0.10616 (6)0.0247 (2)
C130.49893 (12)0.26737 (11)0.08127 (6)0.0297 (2)
H130.53850.19890.11930.036*
C140.61908 (13)0.37664 (13)0.07854 (6)0.0345 (3)
H14A0.59060.43860.03700.052*
H14B0.71330.33260.07190.052*
H14C0.63010.42840.12500.052*
C150.47312 (15)0.19216 (13)0.00699 (7)0.0406 (3)
H15A0.39500.12390.00890.061*
H15B0.56480.1468−0.00270.061*
H15C0.44310.2577−0.03270.061*
C160.21896 (12)0.43226 (12)0.29009 (6)0.0307 (3)
H160.32360.44050.31380.037*
C170.14987 (15)0.31045 (14)0.32582 (7)0.0400 (3)
H17A0.04680.29970.30400.060*
H17B0.15320.32610.37920.060*
H17C0.20540.22750.31720.060*
C180.14025 (15)0.56513 (13)0.30479 (7)0.0404 (3)
H18A0.18740.64100.28150.061*
H18B0.14670.58070.35830.061*
H18C0.03600.55900.28400.061*
N10.48109 (9)0.33206 (9)0.23309 (5)0.02100 (19)
H200.4927 (15)0.2479 (16)0.2480 (8)0.034 (3)*
N20.88469 (10)0.34533 (9)0.45299 (5)0.0264 (2)
O10.55121 (8)0.55210 (7)0.24345 (4)0.02682 (19)
U11U22U33U12U13U23
C10.0212 (5)0.0163 (5)0.0221 (5)0.0015 (4)0.0004 (4)−0.0016 (4)
C20.0191 (4)0.0190 (5)0.0201 (5)0.0019 (4)0.0011 (4)−0.0017 (4)
C30.0256 (5)0.0185 (5)0.0228 (5)−0.0001 (4)0.0000 (4)−0.0015 (4)
C40.0301 (5)0.0213 (5)0.0244 (5)0.0025 (4)−0.0011 (4)0.0021 (4)
C50.0250 (5)0.0240 (5)0.0270 (5)−0.0004 (4)−0.0032 (4)−0.0042 (4)
C60.0240 (5)0.0182 (5)0.0275 (5)0.0010 (4)−0.0015 (4)−0.0013 (4)
C70.0236 (5)0.0148 (4)0.0243 (5)−0.0028 (4)−0.0043 (4)0.0012 (4)
C80.0244 (5)0.0222 (5)0.0281 (5)−0.0029 (4)−0.0020 (4)0.0003 (4)
C90.0232 (5)0.0303 (6)0.0371 (6)−0.0009 (4)−0.0038 (4)0.0014 (5)
C100.0305 (5)0.0279 (6)0.0341 (6)−0.0044 (4)−0.0126 (4)0.0042 (4)
C110.0404 (6)0.0224 (5)0.0231 (5)−0.0049 (4)−0.0067 (4)0.0011 (4)
C120.0323 (5)0.0162 (5)0.0247 (5)−0.0032 (4)−0.0007 (4)0.0014 (4)
C130.0370 (6)0.0247 (5)0.0277 (5)0.0010 (4)0.0044 (4)0.0005 (4)
C140.0360 (6)0.0361 (6)0.0317 (6)−0.0025 (5)0.0051 (5)−0.0008 (5)
C150.0519 (7)0.0347 (7)0.0369 (6)−0.0063 (6)0.0126 (5)−0.0088 (5)
C160.0240 (5)0.0382 (6)0.0294 (6)−0.0007 (4)0.0007 (4)−0.0035 (5)
C170.0483 (7)0.0395 (7)0.0326 (6)0.0046 (6)0.0063 (5)0.0054 (5)
C180.0472 (7)0.0360 (7)0.0402 (7)−0.0020 (5)0.0144 (5)−0.0038 (5)
N10.0231 (4)0.0146 (4)0.0236 (4)−0.0002 (3)−0.0040 (3)0.0009 (3)
N20.0271 (4)0.0266 (5)0.0241 (4)0.0023 (4)−0.0030 (3)−0.0008 (3)
O10.0308 (4)0.0150 (4)0.0317 (4)0.0002 (3)−0.0081 (3)0.0008 (3)
C1—O11.2325 (12)C11—C121.3968 (15)
C1—N11.3366 (13)C11—H110.9500
C1—C21.5057 (13)C12—C131.5215 (15)
C2—C61.3891 (14)C13—C151.5324 (16)
C2—C31.3908 (14)C13—C141.5357 (16)
C3—C41.3885 (14)C13—H131.0000
C3—H30.9500C14—H14A0.9800
C4—N21.3364 (14)C14—H14B0.9800
C4—H40.9500C14—H14C0.9800
C5—N21.3402 (14)C15—H15A0.9800
C5—C61.3845 (14)C15—H15B0.9800
C5—H50.9500C15—H15C0.9800
C6—H60.9500C16—C181.5256 (17)
C7—C81.3996 (15)C16—C171.5302 (17)
C7—C121.4025 (14)C16—H161.0000
C7—N11.4392 (12)C17—H17A0.9800
C8—C91.3981 (14)C17—H17B0.9800
C8—C161.5224 (15)C17—H17C0.9800
C9—C101.3812 (17)C18—H18A0.9800
C9—H90.9500C18—H18B0.9800
C10—C111.3844 (17)C18—H18C0.9800
C10—H100.9500N1—H200.872 (16)
O1—C1—N1122.33 (9)C15—C13—C14109.99 (9)
O1—C1—C2120.52 (9)C12—C13—H13107.0
N1—C1—C2117.12 (8)C15—C13—H13107.0
C6—C2—C3117.96 (9)C14—C13—H13107.0
C6—C2—C1117.57 (9)C13—C14—H14A109.5
C3—C2—C1124.40 (9)C13—C14—H14B109.5
C4—C3—C2118.28 (9)H14A—C14—H14B109.5
C4—C3—H3120.9C13—C14—H14C109.5
C2—C3—H3120.9H14A—C14—H14C109.5
N2—C4—C3124.45 (9)H14B—C14—H14C109.5
N2—C4—H4117.8C13—C15—H15A109.5
C3—C4—H4117.8C13—C15—H15B109.5
N2—C5—C6123.51 (10)H15A—C15—H15B109.5
N2—C5—H5118.2C13—C15—H15C109.5
C6—C5—H5118.2H15A—C15—H15C109.5
C5—C6—C2119.31 (9)H15B—C15—H15C109.5
C5—C6—H6120.3C8—C16—C18113.21 (10)
C2—C6—H6120.3C8—C16—C17109.78 (10)
C8—C7—C12122.98 (9)C18—C16—C17111.51 (10)
C8—C7—N1118.18 (9)C8—C16—H16107.4
C12—C7—N1118.65 (9)C18—C16—H16107.4
C9—C8—C7117.42 (10)C17—C16—H16107.4
C9—C8—C16120.54 (10)C16—C17—H17A109.5
C7—C8—C16121.91 (9)C16—C17—H17B109.5
C10—C9—C8120.78 (10)H17A—C17—H17B109.5
C10—C9—H9119.6C16—C17—H17C109.5
C8—C9—H9119.6H17A—C17—H17C109.5
C9—C10—C11120.68 (10)H17B—C17—H17C109.5
C9—C10—H10119.7C16—C18—H18A109.5
C11—C10—H10119.7C16—C18—H18B109.5
C10—C11—C12120.95 (10)H18A—C18—H18B109.5
C10—C11—H11119.5C16—C18—H18C109.5
C12—C11—H11119.5H18A—C18—H18C109.5
C11—C12—C7117.17 (10)H18B—C18—H18C109.5
C11—C12—C13122.60 (10)C1—N1—C7122.32 (8)
C7—C12—C13120.11 (9)C1—N1—H20121.6 (9)
C12—C13—C15113.31 (10)C7—N1—H20115.5 (9)
C12—C13—C14112.29 (9)C4—N2—C5116.45 (9)
O1—C1—C2—C61.35 (14)C10—C11—C12—C13175.36 (10)
N1—C1—C2—C6−176.83 (9)C8—C7—C12—C11−0.33 (15)
O1—C1—C2—C3178.24 (9)N1—C7—C12—C11174.69 (9)
N1—C1—C2—C30.05 (14)C8—C7—C12—C13−176.56 (9)
C6—C2—C3—C41.29 (14)N1—C7—C12—C13−1.54 (14)
C1—C2—C3—C4−175.58 (9)C11—C12—C13—C15−16.18 (15)
C2—C3—C4—N20.63 (16)C7—C12—C13—C15159.84 (10)
N2—C5—C6—C21.24 (16)C11—C12—C13—C14109.19 (11)
C3—C2—C6—C5−2.17 (15)C7—C12—C13—C14−74.79 (12)
C1—C2—C6—C5174.92 (9)C9—C8—C16—C18−48.05 (14)
C12—C7—C8—C90.93 (15)C7—C8—C16—C18136.15 (11)
N1—C7—C8—C9−174.12 (9)C9—C8—C16—C1777.27 (13)
C12—C7—C8—C16176.85 (10)C7—C8—C16—C17−98.53 (12)
N1—C7—C8—C161.81 (15)O1—C1—N1—C7−8.80 (15)
C7—C8—C9—C10−0.44 (16)C2—C1—N1—C7169.34 (8)
C16—C8—C9—C10−176.43 (10)C8—C7—N1—C1−76.45 (12)
C8—C9—C10—C11−0.62 (17)C12—C7—N1—C1108.28 (11)
C9—C10—C11—C121.25 (17)C3—C4—N2—C5−1.59 (16)
C10—C11—C12—C7−0.76 (15)C6—C5—N2—C40.63 (15)
D—H···AD—HH···AD···AD—H···A
N1—H20···O1i0.872 (16)1.970 (16)2.7985 (11)158.3 (13)
C3—H3···O1i0.952.543.4500 (12)161
C5—H5···N2ii0.952.613.4983 (13)155
C6—H6···Cg1iii0.952.813.6467150
C15—H15B···Cg2iv0.982.973.7858143
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the phenyl and pyridyl rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H20⋯O1i 0.872 (16)1.970 (16)2.7985 (11)158.3 (13)
C3—H3⋯O1i 0.952.543.4500 (12)161
C5—H5⋯N2ii 0.952.613.4983 (13)155
C6—H6⋯Cg1iii 0.952.813.6467150
C15—H15BCg2iv 0.982.973.7858143

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  10 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

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Review 3.  Rethinking amide bond synthesis.

Authors:  Vijaya R Pattabiraman; Jeffrey W Bode
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8.  Three-dimensional porous coordination polymer functionalized with amide groups based on tridentate ligand: selective sorption and catalysis.

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9.  Nonpolymeric hydrogelator derived from N-(4-pyridyl)isonicotinamide.

Authors:  D Krishna Kumar; D Amilan Jose; Parthasarathi Dastidar; Amitava Das
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10.  Methyl 4-isonicotinamido-benzoate monohydrate.

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  10 in total

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